RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 CHKB-CPT1BH3BT56 60 aa3.48□□□□□ -1.85
HERC1-201ENST00000443617 PRB2P02812 416 aaPredicted RBP3.48□□□□□ -1.85
HERC1-201ENST00000443617 IGHV4-28A0A0C4DH34 117 aa3.48□□□□□ -1.85
HERC1-201ENST00000443617 UNQ6190/PRO20217Q6UXQ8 127 aa3.48□□□□□ -1.85
HERC1-201ENST00000443617 C18orf65Q6ZTR6 163 aa3.48□□□□□ -1.85
HERC1-201ENST00000443617 FAM30AQ9NZY2 134 aa3.48□□□□□ -1.85
HERC1-201ENST00000443617 SPTSSBQ8NFR3 76 aa3.48□□□□□ -1.85
HERC1-201ENST00000443617 SPAG11BQ08648 103 aa3.47□□□□□ -1.85
HERC1-201ENST00000443617 A0A1W2PPR1 153 aa3.47□□□□□ -1.85
HERC1-201ENST00000443617 FRYLO94915 3013 aa3.47□□□□□ -1.85
HERC1-201ENST00000443617 PRR15Q8IV56 129 aa3.47□□□□□ -1.85
HERC1-201ENST00000443617 HIGD2AQ9BW72 106 aa3.47□□□□□ -1.85
HERC1-201ENST00000443617 UBE2AP49459 152 aa3.47□□□□□ -1.85
HERC1-201ENST00000443617 PRR4Q16378 134 aa3.47□□□□□ -1.85
HERC1-201ENST00000443617 APCP25054 2843 aa3.47□□□□□ -1.85
HERC1-201ENST00000443617 A0A1B0GUV1 79 aa3.46□□□□□ -1.85
HERC1-201ENST00000443617 CELA1Q9UNI1 258 aa3.46□□□□□ -1.85
HERC1-201ENST00000443617 TRBV7-4A0A0J9YYF1 115 aa3.46□□□□□ -1.86
HERC1-201ENST00000443617 C9orf66Q5T8R8 295 aa3.46□□□□□ -1.86
HERC1-201ENST00000443617 ZNF702PQ9H963 129 aa3.46□□□□□ -1.86
HERC1-201ENST00000443617 RETNQ9HD89 108 aa3.46□□□□□ -1.86
HERC1-201ENST00000443617 IGLV6-57P01721 117 aa3.46□□□□□ -1.86
HERC1-201ENST00000443617 A0A096LNT2 108 aa3.46□□□□□ -1.86
HERC1-201ENST00000443617 UBE2BP63146 152 aa3.46□□□□□ -1.86
HERC1-201ENST00000443617 A0A096LPF7 62 aa3.46□□□□□ -1.86
HERC1-201ENST00000443617 XAGE1AQ9HD64 81 aa3.45□□□□□ -1.86
HERC1-201ENST00000443617 ETDCA0A1B0GVM5 59 aa3.45□□□□□ -1.86
HERC1-201ENST00000443617 REG3AQ06141 175 aa3.45□□□□□ -1.86
HERC1-201ENST00000443617 ZANQ9Y493 2812 aa3.45□□□□□ -1.86
HERC1-201ENST00000443617 M0R378 163 aa3.45□□□□□ -1.86
HERC1-201ENST00000443617 CYSRT1A8MQ03 144 aa3.45□□□□□ -1.86
HERC1-201ENST00000443617 Q1T7F1 81 aa3.45□□□□□ -1.86
HERC1-201ENST00000443617 HIGD2BQ4VC39 106 aa3.45□□□□□ -1.86
HERC1-201ENST00000443617 LINC01006Q8NI28 216 aa3.45□□□□□ -1.86
HERC1-201ENST00000443617 ODF3L2Q3SX64 289 aa3.44□□□□□ -1.86
HERC1-201ENST00000443617 STAB1Q9NY15 2570 aa3.44□□□□□ -1.86
HERC1-201ENST00000443617 NANOS2P60321 138 aaKnown RBP3.44□□□□□ -1.86
HERC1-201ENST00000443617 C3orf84H3BNL1 204 aa3.44□□□□□ -1.86
HERC1-201ENST00000443617 BBC3Q96PG8 261 aaPredicted RBP3.44□□□□□ -1.86
HERC1-201ENST00000443617 PRO3102Q9H379 93 aa3.44□□□□□ -1.86
HERC1-201ENST00000443617 OCR1Q9BZK8 76 aa3.44□□□□□ -1.86
HERC1-201ENST00000443617 hDV103S1A0JD37 113 aa3.44□□□□□ -1.86
HERC1-201ENST00000443617 C19orf84I3L1E1 186 aa3.44□□□□□ -1.86
HERC1-201ENST00000443617 ITPR2Q14571 2701 aa3.43□□□□□ -1.86
HERC1-201ENST00000443617 MAPK1IP1LQ8NDC0 245 aa3.43□□□□□ -1.86
HERC1-201ENST00000443617 Q6YL49 198 aa3.43□□□□□ -1.86
HERC1-201ENST00000443617 NDUFB1O75438 58 aa3.43□□□□□ -1.86
HERC1-201ENST00000443617 PLA2G2AP14555 144 aa3.43□□□□□ -1.86
HERC1-201ENST00000443617 KPRPQ5T749 579 aaPredicted RBP3.43□□□□□ -1.86
HERC1-201ENST00000443617 NKAPP1Q8N9T2 125 aa3.43□□□□□ -1.86
HERC1-201ENST00000443617 TRAV22A0A0B4J277 110 aa3.43□□□□□ -1.86
HERC1-201ENST00000443617 DHRS4-AS1Q9P1J3 65 aa3.43□□□□□ -1.86
HERC1-201ENST00000443617 KMT2BQ9UMN6 2715 aaPredicted RBP3.43□□□□□ -1.86
HERC1-201ENST00000443617 C10orf25Q5T742 122 aa3.43□□□□□ -1.86
HERC1-201ENST00000443617 Q6ZTC4 211 aa3.43□□□□□ -1.86
HERC1-201ENST00000443617 IGKV4-1P06312 121 aa3.43□□□□□ -1.86
HERC1-201ENST00000443617 CAMK2N2Q96S95 79 aa3.43□□□□□ -1.86
HERC1-201ENST00000443617 C1orf64Q8NEQ6 169 aa3.42□□□□□ -1.86
HERC1-201ENST00000443617 PRR15LQ9BU68 103 aa3.42□□□□□ -1.86
HERC1-201ENST00000443617 PRO0255Q9UI72 69 aa3.42□□□□□ -1.86
HERC1-201ENST00000443617 FAM229BQ4G0N7 80 aa3.42□□□□□ -1.86
HERC1-201ENST00000443617 NSD1Q96L73 2696 aaPredicted RBP3.42□□□□□ -1.86
HERC1-201ENST00000443617 LRBAP50851 2863 aa3.42□□□□□ -1.86
HERC1-201ENST00000443617 VCANP13611 3396 aa3.42□□□□□ -1.86
HERC1-201ENST00000443617 ASH1LQ9NR48 2969 aaKnown RBP3.42□□□□□ -1.86
HERC1-201ENST00000443617 GIG44P09565 113 aaPredicted RBP3.42□□□□□ -1.86
HERC1-201ENST00000443617 A6NED7 52 aa3.41□□□□□ -1.86
HERC1-201ENST00000443617 M0R2N4 97 aa3.41□□□□□ -1.86
HERC1-201ENST00000443617 LIMD2Q9BT23 127 aa3.41□□□□□ -1.86
HERC1-201ENST00000443617 CD164Q04900 197 aa3.41□□□□□ -1.86
HERC1-201ENST00000443617 OXLD1Q5BKU9 147 aa3.41□□□□□ -1.86
HERC1-201ENST00000443617 KLK12Q9UKR0 248 aa3.41□□□□□ -1.86
HERC1-201ENST00000443617 IGHV4-31P0DP07 118 aa3.41□□□□□ -1.86
HERC1-201ENST00000443617 ESM1Q9NQ30 184 aa3.41□□□□□ -1.86
HERC1-201ENST00000443617 APOC4P55056 127 aa3.41□□□□□ -1.86
HERC1-201ENST00000443617 KIAA0087Q14695 138 aa3.4□□□□□ -1.86
HERC1-201ENST00000443617 Q6ZRU5 148 aa3.4□□□□□ -1.86
HERC1-201ENST00000443617 LAMA1P25391 3075 aa3.4□□□□□ -1.86
HERC1-201ENST00000443617 ADGRG4Q8IZF6 3080 aa3.4□□□□□ -1.86
HERC1-201ENST00000443617 NF1P21359 2839 aa3.4□□□□□ -1.86
HERC1-201ENST00000443617 DMXL2Q8TDJ6 3036 aa3.4□□□□□ -1.87
HERC1-201ENST00000443617 DEFB4AO15263 64 aa3.4□□□□□ -1.87
HERC1-201ENST00000443617 NDUFS5O43920 106 aa3.4□□□□□ -1.87
HERC1-201ENST00000443617 B9D2Q9BPU9 175 aa3.39□□□□□ -1.87
HERC1-201ENST00000443617 CDH23Q9H251 3354 aa3.39□□□□□ -1.87
HERC1-201ENST00000443617 A0A1B0GW54 56 aa3.39□□□□□ -1.87
HERC1-201ENST00000443617 WFDC10AQ9H1F0 79 aa3.39□□□□□ -1.87
HERC1-201ENST00000443617 A8MUN3 132 aa3.39□□□□□ -1.87
HERC1-201ENST00000443617 EGFEM1PQ0D2K5 195 aa3.39□□□□□ -1.87
HERC1-201ENST00000443617 SMIM29Q86T20 159 aa3.39□□□□□ -1.87
HERC1-201ENST00000443617 HCG22E2RYF7 251 aa3.39□□□□□ -1.87
HERC1-201ENST00000443617 GVQW2A0A096LPI5 108 aaPredicted RBP3.38□□□□□ -1.87
HERC1-201ENST00000443617 CFAP47Q6ZTR5 3102 aa3.38□□□□□ -1.87
HERC1-201ENST00000443617 ATP11AUNQ6ZP68 121 aa3.38□□□□□ -1.87
HERC1-201ENST00000443617 STAB2Q8WWQ8 2551 aa3.38□□□□□ -1.87
HERC1-201ENST00000443617 C1orf137Q5JT78 98 aa3.38□□□□□ -1.87
HERC1-201ENST00000443617 C6orf48Q9UBA6 75 aa3.38□□□□□ -1.87
HERC1-201ENST00000443617 WFDC10BQ8IUB3 73 aa3.37□□□□□ -1.87
HERC1-201ENST00000443617 LELP1Q5T871 98 aa3.37□□□□□ -1.87
HERC1-201ENST00000443617 TNRC18O15417 2968 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms