RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 IGHV1-24A0A0C4DH33 117 aa4.24□□□□□ -1.73
ECHDC1-208ENST00000436638 M0QY20 66 aa4.24□□□□□ -1.73
ECHDC1-208ENST00000436638 PPP1R17O96001 155 aa4.24□□□□□ -1.73
ECHDC1-208ENST00000436638 CKS2P33552 79 aa4.24□□□□□ -1.73
ECHDC1-208ENST00000436638 LINC00315P59091 139 aa4.24□□□□□ -1.73
ECHDC1-208ENST00000436638 HIST1H4AP62805 103 aaKnown RBP4.24□□□□□ -1.73
ECHDC1-208ENST00000436638 KIAA0087Q14695 138 aa4.24□□□□□ -1.73
ECHDC1-208ENST00000436638 TMEM170BQ5T4T1 132 aa4.24□□□□□ -1.73
ECHDC1-208ENST00000436638 LINC00242Q5T6M2 205 aa4.24□□□□□ -1.73
ECHDC1-208ENST00000436638 FAM104BQ5XKR9 115 aa4.24□□□□□ -1.73
ECHDC1-208ENST00000436638 CHCHD10Q8WYQ3 142 aaPredicted RBP4.24□□□□□ -1.73
ECHDC1-208ENST00000436638 LINC01600Q96MT4 127 aa4.24□□□□□ -1.73
ECHDC1-208ENST00000436638 TMEM243Q9BU79 118 aa4.24□□□□□ -1.73
ECHDC1-208ENST00000436638 UBE2AP49459 152 aa4.23□□□□□ -1.73
ECHDC1-208ENST00000436638 LYPD5Q6UWN5 251 aa4.23□□□□□ -1.73
ECHDC1-208ENST00000436638 PRSS3P2Q8NHM4 247 aa4.23□□□□□ -1.73
ECHDC1-208ENST00000436638 OPRPNQ99935 248 aaPredicted RBP4.23□□□□□ -1.73
ECHDC1-208ENST00000436638 MEGF8Q7Z7M0 2845 aa4.23□□□□□ -1.73
ECHDC1-208ENST00000436638 IGHV3-38A0A0C4DH36 116 aa4.22□□□□□ -1.73
ECHDC1-208ENST00000436638 UBE2D3P61077 147 aa4.22□□□□□ -1.73
ECHDC1-208ENST00000436638 UBE2D2P62837 147 aa4.22□□□□□ -1.73
ECHDC1-208ENST00000436638 SS18Q15532 418 aa4.22□□□□□ -1.73
ECHDC1-208ENST00000436638 ESRGQ1W209 222 aa4.22□□□□□ -1.73
ECHDC1-208ENST00000436638 MRPL51Q4U2R6 128 aaKnown RBP4.22□□□□□ -1.73
ECHDC1-208ENST00000436638 LELP1Q5T871 98 aa4.22□□□□□ -1.73
ECHDC1-208ENST00000436638 LINC00643Q86TS7 51 aa4.22□□□□□ -1.73
ECHDC1-208ENST00000436638 ORMDL3Q8N138 153 aa4.22□□□□□ -1.73
ECHDC1-208ENST00000436638 Q8N8P6 123 aa4.22□□□□□ -1.73
ECHDC1-208ENST00000436638 ZNF706Q9Y5V0 76 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-208ENST00000436638 NACAE9PAV3 2078 aa4.22□□□□□ -1.73
ECHDC1-208ENST00000436638 LCE6AA0A183 80 aa4.21□□□□□ -1.74
ECHDC1-208ENST00000436638 SDHAF1A6NFY7 115 aa4.21□□□□□ -1.74
ECHDC1-208ENST00000436638 D6R8Y8 96 aa4.21□□□□□ -1.74
ECHDC1-208ENST00000436638 RPL39LQ96EH5 51 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-208ENST00000436638 TRBV25-1A0A075B6N4 114 aa4.2□□□□□ -1.74
ECHDC1-208ENST00000436638 IGLV9-49A0A0B4J1Y8 123 aa4.2□□□□□ -1.74
ECHDC1-208ENST00000436638 TRBV6-5A0A0K0K1A5 114 aa4.2□□□□□ -1.74
ECHDC1-208ENST00000436638 I3L3M4 83 aa4.2□□□□□ -1.74
ECHDC1-208ENST00000436638 FCER1GP30273 86 aa4.2□□□□□ -1.74
ECHDC1-208ENST00000436638 FUSP35637 526 aaKnown RBP eCLIP4.2□□□□□ -1.74
ECHDC1-208ENST00000436638 CIRBPQ14011 172 aaKnown RBP4.2□□□□□ -1.74
ECHDC1-208ENST00000436638 LINC01554Q52M75 96 aa4.2□□□□□ -1.74
ECHDC1-208ENST00000436638 DIRC1Q969H9 104 aa4.2□□□□□ -1.74
ECHDC1-208ENST00000436638 IGLV2-18A0A075B6J9 118 aa4.19□□□□□ -1.74
ECHDC1-208ENST00000436638 TRBV6-8A0A0A6YYG3 113 aa4.19□□□□□ -1.74
ECHDC1-208ENST00000436638 NDUFC1O43677 76 aa4.19□□□□□ -1.74
ECHDC1-208ENST00000436638 NPYP01303 97 aa4.19□□□□□ -1.74
ECHDC1-208ENST00000436638 CCKP06307 115 aa4.19□□□□□ -1.74
ECHDC1-208ENST00000436638 LINC00173Q6ZV60 143 aa4.19□□□□□ -1.74
ECHDC1-208ENST00000436638 NRACQ8N912 160 aa4.19□□□□□ -1.74
ECHDC1-208ENST00000436638 TENM3Q9P273 2699 aa4.18□□□□□ -1.74
ECHDC1-208ENST00000436638 NBEAL2Q6ZNJ1 2754 aa4.18□□□□□ -1.74
ECHDC1-208ENST00000436638 IBA57-AS1B1ANH7 110 aa4.18□□□□□ -1.74
ECHDC1-208ENST00000436638 M0R2N4 97 aa4.18□□□□□ -1.74
ECHDC1-208ENST00000436638 GAS8-AS1O95177 125 aa4.18□□□□□ -1.74
ECHDC1-208ENST00000436638 IGHV3-30P01768 117 aa4.18□□□□□ -1.74
ECHDC1-208ENST00000436638 IGHV3-33P01772 117 aa4.18□□□□□ -1.74
ECHDC1-208ENST00000436638 IGHV3-30-3P0DP02 117 aa4.18□□□□□ -1.74
ECHDC1-208ENST00000436638 IGHV3-30-5P0DP03 117 aa4.18□□□□□ -1.74
ECHDC1-208ENST00000436638 POLR2KP53803 58 aaKnown RBP4.18□□□□□ -1.74
ECHDC1-208ENST00000436638 SCXQ7RTU7 201 aa4.18□□□□□ -1.74
ECHDC1-208ENST00000436638 WFDC10BQ8IUB3 73 aa4.18□□□□□ -1.74
ECHDC1-208ENST00000436638 DEFB104AQ8WTQ1 72 aa4.18□□□□□ -1.74
ECHDC1-208ENST00000436638 SMIM2Q9BVW6 85 aa4.18□□□□□ -1.74
ECHDC1-208ENST00000436638 NHP2Q9NX24 153 aaKnown RBP4.18□□□□□ -1.74
ECHDC1-208ENST00000436638 NTM-AS1Q6ZSK4 140 aa4.17□□□□□ -1.74
ECHDC1-208ENST00000436638 FAM218AQ96MZ4 157 aa4.17□□□□□ -1.74
ECHDC1-208ENST00000436638 CHCHD7Q9BUK0 85 aa4.17□□□□□ -1.74
ECHDC1-208ENST00000436638 NBDYA0A0U1RRE5 68 aa4.16□□□□□ -1.74
ECHDC1-208ENST00000436638 H7C423 109 aa4.16□□□□□ -1.74
ECHDC1-208ENST00000436638 K7EMI3 77 aa4.16□□□□□ -1.74
ECHDC1-208ENST00000436638 TSHBP01222 138 aa4.16□□□□□ -1.74
ECHDC1-208ENST00000436638 CRPP02741 224 aa4.16□□□□□ -1.74
ECHDC1-208ENST00000436638 ANGP03950 147 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-208ENST00000436638 IGKV2-30P06310 120 aa4.16□□□□□ -1.74
ECHDC1-208ENST00000436638 DNAH10OSP0CZ25 163 aa4.16□□□□□ -1.74
ECHDC1-208ENST00000436638 RBM3P98179 157 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-208ENST00000436638 LINC01556Q5JQF7 62 aa4.16□□□□□ -1.74
ECHDC1-208ENST00000436638 ATP11AUNQ6ZP68 121 aa4.16□□□□□ -1.74
ECHDC1-208ENST00000436638 UBE2WQ96B02 151 aa4.16□□□□□ -1.74
ECHDC1-208ENST00000436638 CHCHD1Q96BP2 118 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-208ENST00000436638 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.15□□□□□ -1.75
ECHDC1-208ENST00000436638 IGKV2-29A2NJV5 120 aaPredicted RBP4.15□□□□□ -1.75
ECHDC1-208ENST00000436638 SLC25A20O43772 301 aa4.15□□□□□ -1.75
ECHDC1-208ENST00000436638 BCE1O60756 84 aa4.15□□□□□ -1.75
ECHDC1-208ENST00000436638 FXYD2P54710 66 aa4.15□□□□□ -1.75
ECHDC1-208ENST00000436638 RMI2Q96E14 147 aa4.15□□□□□ -1.75
ECHDC1-208ENST00000436638 KLK12Q9UKR0 248 aa4.15□□□□□ -1.75
ECHDC1-208ENST00000436638 MYMXA0A1B0GTQ4 84 aa4.14□□□□□ -1.75
ECHDC1-208ENST00000436638 A0A1B0GUV1 79 aa4.14□□□□□ -1.75
ECHDC1-208ENST00000436638 IFI27P40305 119 aaPredicted RBP4.14□□□□□ -1.75
ECHDC1-208ENST00000436638 C1orf134Q5TEV5 83 aa4.14□□□□□ -1.75
ECHDC1-208ENST00000436638 C20orf203Q8NBC4 194 aa4.14□□□□□ -1.75
ECHDC1-208ENST00000436638 CYSTM1Q9H1C7 97 aa4.14□□□□□ -1.75
ECHDC1-208ENST00000436638 IGKV3OR2-268A0A0C4DH90 116 aa4.13□□□□□ -1.75
ECHDC1-208ENST00000436638 A0A1B0GW54 56 aa4.13□□□□□ -1.75
ECHDC1-208ENST00000436638 LINC01549A6NIU2 74 aa4.13□□□□□ -1.75
ECHDC1-208ENST00000436638 PSCAO43653 123 aa4.13□□□□□ -1.75
ECHDC1-208ENST00000436638 LEPROTL1O95214 131 aa4.13□□□□□ -1.75
ECHDC1-208ENST00000436638 S100A7L2Q5SY68 101 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 247 ms