RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 AKAP6Q13023 2319 aa0.16□□□□□ -2.38
PTPN4-205ENST00000433888 IQSEC2Q5JU85 1478 aa0.16□□□□□ -2.38
PTPN4-205ENST00000433888 IGSF10Q6WRI0 2623 aa0.16□□□□□ -2.38
PTPN4-205ENST00000433888 HUWE1Q7Z6Z7 4374 aaKnown RBP0.16□□□□□ -2.38
PTPN4-205ENST00000433888 I3L3M4 83 aa0.16□□□□□ -2.38
PTPN4-205ENST00000433888 HMGN2P05204 90 aaKnown RBP0.16□□□□□ -2.38
PTPN4-205ENST00000433888 SMIM11AP58511 58 aa0.16□□□□□ -2.38
PTPN4-205ENST00000433888 WNK2Q9Y3S1 2297 aa0.16□□□□□ -2.38
PTPN4-205ENST00000433888 ABCC2Q92887 1545 aa0.15□□□□□ -2.39
PTPN4-205ENST00000433888 LOC730098B7Z3J9 87 aa0.15□□□□□ -2.39
PTPN4-205ENST00000433888 PRM1P04553 51 aa0.15□□□□□ -2.39
PTPN4-205ENST00000433888 COX8AP10176 69 aa0.15□□□□□ -2.39
PTPN4-205ENST00000433888 HMGN3Q15651 99 aa0.15□□□□□ -2.39
PTPN4-205ENST00000433888 H1FX-AS1Q4G0G2 97 aa0.15□□□□□ -2.39
PTPN4-205ENST00000433888 UBE2D4Q9Y2X8 147 aa0.15□□□□□ -2.39
PTPN4-205ENST00000433888 PKD1L3Q7Z443 1732 aa0.15□□□□□ -2.39
PTPN4-205ENST00000433888 KMT2AQ03164 3969 aa0.15□□□□□ -2.39
PTPN4-205ENST00000433888 UBR3Q6ZT12 1888 aa0.14□□□□□ -2.39
PTPN4-205ENST00000433888 EPRSP07814 1512 aaKnown RBP0.14□□□□□ -2.39
PTPN4-205ENST00000433888 NMSQ5H8A3 153 aa0.14□□□□□ -2.39
PTPN4-205ENST00000433888 ALKAL2Q6UX46 152 aa0.14□□□□□ -2.39
PTPN4-205ENST00000433888 SPTBN1Q01082 2364 aaKnown RBP0.13□□□□□ -2.39
PTPN4-205ENST00000433888 MYO3AQ8NEV4 1616 aa0.13□□□□□ -2.39
PTPN4-205ENST00000433888 RGPD1P0DJD0 1748 aa0.13□□□□□ -2.39
PTPN4-205ENST00000433888 MYCBP2O75592 4640 aa0.13□□□□□ -2.39
PTPN4-205ENST00000433888 GVINP1Q7Z2Y8 2422 aa0.13□□□□□ -2.39
PTPN4-205ENST00000433888 ATRQ13535 2644 aa0.13□□□□□ -2.39
PTPN4-205ENST00000433888 SPTY2D1-AS1A0A0U1RR47 76 aa0.13□□□□□ -2.39
PTPN4-205ENST00000433888 HEPN1Q6WQI6 88 aa0.13□□□□□ -2.39
PTPN4-205ENST00000433888 TNXBP22105 4242 aa0.13□□□□□ -2.39
PTPN4-205ENST00000433888 SAMD9Q5K651 1589 aa0.13□□□□□ -2.39
PTPN4-205ENST00000433888 FSIP2Q5CZC0 6907 aa0.12□□□□□ -2.39
PTPN4-205ENST00000433888 NKTRP30414 1462 aaKnown RBP0.12□□□□□ -2.39
PTPN4-205ENST00000433888 PRKDCP78527 4128 aaKnown RBP0.12□□□□□ -2.39
PTPN4-205ENST00000433888 MYMXA0A1B0GTQ4 84 aa0.12□□□□□ -2.39
PTPN4-205ENST00000433888 A0A1B0GUT8 65 aa0.12□□□□□ -2.39
PTPN4-205ENST00000433888 PVALEFA0A1B0GWK0 134 aa0.12□□□□□ -2.39
PTPN4-205ENST00000433888 PLGLAQ15195 96 aa0.12□□□□□ -2.39
PTPN4-205ENST00000433888 MRPL34Q9BQ48 92 aaKnown RBP0.12□□□□□ -2.39
PTPN4-205ENST00000433888 SPRR2GQ9BYE4 73 aa0.12□□□□□ -2.39
PTPN4-205ENST00000433888 FANCAO15360 1455 aa0.11□□□□□ -2.39
PTPN4-205ENST00000433888 PLIN4Q96Q06 1357 aa0.11□□□□□ -2.39
PTPN4-205ENST00000433888 SPINK4O60575 86 aa0.11□□□□□ -2.39
PTPN4-205ENST00000433888 GAFA1Q96PS6 74 aa0.11□□□□□ -2.39
PTPN4-205ENST00000433888 HMCN2Q8NDA2 5059 aa0.11□□□□□ -2.39
PTPN4-205ENST00000433888 TROQ12816 1431 aaPredicted RBP0.11□□□□□ -2.39
PTPN4-205ENST00000433888 CEP162Q5TB80 1403 aa0.11□□□□□ -2.39
PTPN4-205ENST00000433888 DCHS2Q6V1P9 2916 aa0.1□□□□□ -2.39
PTPN4-205ENST00000433888 LRRC37AA6NMS7 1700 aa0.1□□□□□ -2.39
PTPN4-205ENST00000433888 LRRC7Q96NW7 1537 aa0.1□□□□□ -2.39
PTPN4-205ENST00000433888 TRAV21A0A0B4J279 112 aa0.1□□□□□ -2.39
PTPN4-205ENST00000433888 COX7BP24311 80 aa0.1□□□□□ -2.39
PTPN4-205ENST00000433888 SNRPFP62306 86 aaKnown RBP0.1□□□□□ -2.39
PTPN4-205ENST00000433888 WFDC9Q8NEX5 89 aa0.1□□□□□ -2.39
PTPN4-205ENST00000433888 HIVEP3Q5T1R4 2406 aa0.09□□□□□ -2.39
PTPN4-205ENST00000433888 TMEM131LA2VDJ0 1609 aa0.09□□□□□ -2.39
PTPN4-205ENST00000433888 HSPG2P98160 4391 aa0.09□□□□□ -2.39
PTPN4-205ENST00000433888 CSPG4Q6UVK1 2322 aa0.09□□□□□ -2.39
PTPN4-205ENST00000433888 ZNF831Q5JPB2 1677 aa0.09□□□□□ -2.39
PTPN4-205ENST00000433888 MACF1Q9UPN3 7388 aaKnown RBP0.09□□□□□ -2.4
PTPN4-205ENST00000433888 SUPT6HQ7KZ85 1726 aaKnown RBP0.09□□□□□ -2.4
PTPN4-205ENST00000433888 KIF14Q15058 1648 aa0.09□□□□□ -2.4
PTPN4-205ENST00000433888 PPLO60437 1756 aa0.09□□□□□ -2.4
PTPN4-205ENST00000433888 CACNA1AO00555 2505 aa0.09□□□□□ -2.4
PTPN4-205ENST00000433888 CEBPZOSA8MTT3 80 aa0.08□□□□□ -2.4
PTPN4-205ENST00000433888 LINC00643Q86TS7 51 aa0.08□□□□□ -2.4
PTPN4-205ENST00000433888 BCORQ6W2J9 1755 aa0.08□□□□□ -2.4
PTPN4-205ENST00000433888 CCDC141Q6ZP82 1450 aa0.08□□□□□ -2.4
PTPN4-205ENST00000433888 ABCC3O15438 1527 aa0.08□□□□□ -2.4
PTPN4-205ENST00000433888 ABCA2Q9BZC7 2435 aa0.07□□□□□ -2.4
PTPN4-205ENST00000433888 LPAP08519 4548 aa0.07□□□□□ -2.4
PTPN4-205ENST00000433888 ALKQ9UM73 1620 aa0.06□□□□□ -2.4
PTPN4-205ENST00000433888 MAGI2Q86UL8 1455 aa0.06□□□□□ -2.4
PTPN4-205ENST00000433888 WFDC13Q8IUB5 93 aa0.06□□□□□ -2.4
PTPN4-205ENST00000433888 REV3LO60673 3130 aa0.06□□□□□ -2.4
PTPN4-205ENST00000433888 ATP7BP35670 1465 aa0.05□□□□□ -2.4
PTPN4-205ENST00000433888 QSER1Q2KHR3 1735 aa0.05□□□□□ -2.4
PTPN4-205ENST00000433888 NDUFA3O95167 84 aa0.05□□□□□ -2.4
PTPN4-205ENST00000433888 SETXQ7Z333 2677 aaKnown RBP0.05□□□□□ -2.4
PTPN4-205ENST00000433888 DMBT1Q9UGM3 2413 aaPredicted RBP0.05□□□□□ -2.4
PTPN4-205ENST00000433888 FLNCQ14315 2725 aa0.05□□□□□ -2.4
PTPN4-205ENST00000433888 DOT1LQ8TEK3 1739 aa0.04□□□□□ -2.4
PTPN4-205ENST00000433888 LTN1O94822 1766 aa0.04□□□□□ -2.4
PTPN4-205ENST00000433888 ALMS1Q8TCU4 4167 aa0.04□□□□□ -2.4
PTPN4-205ENST00000433888 KANTRA0A1W2PQU2 76 aa0.04□□□□□ -2.4
PTPN4-205ENST00000433888 H3BUT2 72 aa0.04□□□□□ -2.4
PTPN4-205ENST00000433888 ADIRFQ15847 76 aa0.04□□□□□ -2.4
PTPN4-205ENST00000433888 ST20Q9HBF5 79 aa0.04□□□□□ -2.4
PTPN4-205ENST00000433888 POLR1AO95602 1720 aaPredicted RBP0.04□□□□□ -2.4
PTPN4-205ENST00000433888 UACAQ9BZF9 1416 aa0.04□□□□□ -2.4
PTPN4-205ENST00000433888 NCOA2Q15596 1464 aa0.03□□□□□ -2.4
PTPN4-205ENST00000433888 NSD1Q96L73 2696 aaPredicted RBP0.03□□□□□ -2.4
PTPN4-205ENST00000433888 MAP1AP78559 2803 aaPredicted RBP0.03□□□□□ -2.4
PTPN4-205ENST00000433888 ACYP1P07311 99 aa0.03□□□□□ -2.4
PTPN4-205ENST00000433888 CDKN2A-AS1Q9UH64 79 aa0.03□□□□□ -2.4
PTPN4-205ENST00000433888 RABAC1Q9UI14 185 aa0.03□□□□□ -2.4
PTPN4-205ENST00000433888 CLIP1P30622 1438 aa0.03□□□□□ -2.41
PTPN4-205ENST00000433888 SSPOA2VEC9 5147 aa0.02□□□□□ -2.41
PTPN4-205ENST00000433888 M0R2T5 61 aa0.02□□□□□ -2.41
PTPN4-205ENST00000433888 IFI6P09912 130 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms