RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 UQCRQO14949 82 aa8.98□□□□□ -0.97
PTCH1-207ENST00000429896 LINC01546A6NGU7 62 aa8.98□□□□□ -0.97
PTCH1-207ENST00000429896 TRBV30A0A0K0K1B3 111 aa8.98□□□□□ -0.97
PTCH1-207ENST00000429896 LINC00242Q5T6M2 205 aa8.98□□□□□ -0.97
PTCH1-207ENST00000429896 ITPR3Q14573 2671 aa8.97□□□□□ -0.97
PTCH1-207ENST00000429896 Q6Q795 121 aa8.97□□□□□ -0.97
PTCH1-207ENST00000429896 CCDC179H3BU77 68 aa8.97□□□□□ -0.97
PTCH1-207ENST00000429896 FAM19A3Q7Z5A8 133 aa8.97□□□□□ -0.97
PTCH1-207ENST00000429896 REV3LO60673 3130 aa8.97□□□□□ -0.97
PTCH1-207ENST00000429896 REG3GQ6UW15 175 aa8.96□□□□□ -0.97
PTCH1-207ENST00000429896 SOSTDC1Q6X4U4 206 aa8.96□□□□□ -0.98
PTCH1-207ENST00000429896 SERP2Q8N6R1 65 aa8.96□□□□□ -0.98
PTCH1-207ENST00000429896 TIMM17BO60830 172 aa8.95□□□□□ -0.98
PTCH1-207ENST00000429896 LINC00315P59091 139 aa8.95□□□□□ -0.98
PTCH1-207ENST00000429896 TRBV10-3A0A0K0K1G6 114 aa8.95□□□□□ -0.98
PTCH1-207ENST00000429896 A0A087WYN8 130 aa8.94□□□□□ -0.98
PTCH1-207ENST00000429896 COX17Q14061 63 aa8.94□□□□□ -0.98
PTCH1-207ENST00000429896 GIG44P09565 113 aaPredicted RBP8.94□□□□□ -0.98
PTCH1-207ENST00000429896 F8WDY8 70 aa8.93□□□□□ -0.98
PTCH1-207ENST00000429896 LINC00588Q9Y4M8 146 aa8.93□□□□□ -0.98
PTCH1-207ENST00000429896 NBDYA0A0U1RRE5 68 aa8.93□□□□□ -0.98
PTCH1-207ENST00000429896 LINC00208Q96KT6 92 aa8.93□□□□□ -0.98
PTCH1-207ENST00000429896 AMELXQ99217 191 aa8.93□□□□□ -0.98
PTCH1-207ENST00000429896 A0A087WVE0 104 aa8.91□□□□□ -0.98
PTCH1-207ENST00000429896 RPL28P46779 137 aaKnown RBP8.91□□□□□ -0.98
PTCH1-207ENST00000429896 NTM-AS1Q6ZSK4 140 aa8.91□□□□□ -0.98
PTCH1-207ENST00000429896 PRYO14603 147 aa8.91□□□□□ -0.98
PTCH1-207ENST00000429896 EYSQ5T1H1 3165 aa8.91□□□□□ -0.98
PTCH1-207ENST00000429896 LINC01547P58512 204 aaPredicted RBP8.91□□□□□ -0.98
PTCH1-207ENST00000429896 ATP5EP2Q5VTU8 51 aa8.9□□□□□ -0.98
PTCH1-207ENST00000429896 TRBV7-6A0A0J9YX20 115 aa8.9□□□□□ -0.98
PTCH1-207ENST00000429896 Q9BRP9 147 aa8.9□□□□□ -0.98
PTCH1-207ENST00000429896 SMIM1B2RUZ4 78 aa8.9□□□□□ -0.98
PTCH1-207ENST00000429896 C2orf48Q96LS8 159 aa8.9□□□□□ -0.98
PTCH1-207ENST00000429896 WIPF1O43516 503 aa8.89□□□□□ -0.99
PTCH1-207ENST00000429896 LST1O00453 97 aa8.89□□□□□ -0.99
PTCH1-207ENST00000429896 PRLHP81277 87 aa8.89□□□□□ -0.99
PTCH1-207ENST00000429896 Q9UF83 564 aa8.89□□□□□ -0.99
PTCH1-207ENST00000429896 LINC01561Q8N1V8 128 aa8.88□□□□□ -0.99
PTCH1-207ENST00000429896 CFAP54Q96N23 3096 aa8.88□□□□□ -0.99
PTCH1-207ENST00000429896 BAHCC1Q9P281 2608 aa8.87□□□□□ -0.99
PTCH1-207ENST00000429896 PSPHP1O15172 72 aa8.86□□□□□ -0.99
PTCH1-207ENST00000429896 VCANP13611 3396 aa8.86□□□□□ -0.99
PTCH1-207ENST00000429896 Q8N814 137 aa8.86□□□□□ -0.99
PTCH1-207ENST00000429896 TSPEAR-AS2P59090 65 aa8.86□□□□□ -0.99
PTCH1-207ENST00000429896 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.85□□□□□ -0.99
PTCH1-207ENST00000429896 XGP55808 180 aa8.85□□□□□ -0.99
PTCH1-207ENST00000429896 UNC79Q9P2D8 2635 aa8.85□□□□□ -0.99
PTCH1-207ENST00000429896 LAMA1P25391 3075 aa8.84□□□□□ -0.99
PTCH1-207ENST00000429896 A0A087WSZ3 146 aa8.84□□□□□ -0.99
PTCH1-207ENST00000429896 ADAMTSL4-AS1Q5T5F5 129 aa8.84□□□□□ -0.99
PTCH1-207ENST00000429896 LINC00575Q6W349 94 aa8.84□□□□□ -0.99
PTCH1-207ENST00000429896 LINC00612Q8N6U2 182 aa8.83□□□□□ -1
PTCH1-207ENST00000429896 V9GYY9 64 aa8.83□□□□□ -1
PTCH1-207ENST00000429896 CRYGAP11844 174 aa8.83□□□□□ -1
PTCH1-207ENST00000429896 CHD6Q8TD26 2715 aa8.83□□□□□ -1
PTCH1-207ENST00000429896 IGKV2D-30A0A075B6S6 120 aa8.82□□□□□ -1
PTCH1-207ENST00000429896 IGKV2-30P06310 120 aa8.82□□□□□ -1
PTCH1-207ENST00000429896 DNAH10OSP0CZ25 163 aa8.82□□□□□ -1
PTCH1-207ENST00000429896 Q6ZRU5 148 aa8.81□□□□□ -1
PTCH1-207ENST00000429896 PLA2G1BP04054 148 aaKnown RBP8.81□□□□□ -1
PTCH1-207ENST00000429896 MUC4Q99102 2169 aa8.81□□□□□ -1
PTCH1-207ENST00000429896 Q8N3U1 123 aa8.81□□□□□ -1
PTCH1-207ENST00000429896 AGRNO00468 2067 aa8.81□□□□□ -1
PTCH1-207ENST00000429896 COX7CP15954 63 aa8.8□□□□□ -1
PTCH1-207ENST00000429896 SPACA4Q8TDM5 124 aa8.8□□□□□ -1
PTCH1-207ENST00000429896 H0Y9P7 68 aa8.8□□□□□ -1
PTCH1-207ENST00000429896 HCG22E2RYF7 251 aa8.79□□□□□ -1
PTCH1-207ENST00000429896 NDUFC1O43677 76 aa8.78□□□□□ -1
PTCH1-207ENST00000429896 CHTF8P0CG12 524 aa8.78□□□□□ -1
PTCH1-207ENST00000429896 CENPEQ02224 2701 aa8.78□□□□□ -1
PTCH1-207ENST00000429896 APLNQ9ULZ1 77 aa8.78□□□□□ -1
PTCH1-207ENST00000429896 C1orf195Q5TG92 126 aa8.77□□□□□ -1.01
PTCH1-207ENST00000429896 RTL8CO15255 209 aa8.77□□□□□ -1.01
PTCH1-207ENST00000429896 VPS13AQ96RL7 3174 aa8.77□□□□□ -1.01
PTCH1-207ENST00000429896 LINC00337Q8N6G1 96 aa8.77□□□□□ -1.01
PTCH1-207ENST00000429896 DNAH14Q0VDD8 3507 aa8.77□□□□□ -1.01
PTCH1-207ENST00000429896 PMAIP1Q13794 54 aa8.77□□□□□ -1.01
PTCH1-207ENST00000429896 ATP5EP56381 51 aaPredicted RBP8.76□□□□□ -1.01
PTCH1-207ENST00000429896 Q6JHZ5 121 aa8.76□□□□□ -1.01
PTCH1-207ENST00000429896 C7orf65Q6ZTY9 151 aa8.76□□□□□ -1.01
PTCH1-207ENST00000429896 IGHV3OR16-9A0A0B4J2B5 98 aa8.76□□□□□ -1.01
PTCH1-207ENST00000429896 FRYQ5TBA9 3013 aa8.75□□□□□ -1.01
PTCH1-207ENST00000429896 C16orf90A8MZG2 172 aa8.75□□□□□ -1.01
PTCH1-207ENST00000429896 SMCR5Q8TEV8 140 aa8.73□□□□□ -1.01
PTCH1-207ENST00000429896 TRBV7-7A0A0K0K1E9 115 aa8.73□□□□□ -1.01
PTCH1-207ENST00000429896 C22orf24Q9Y442 160 aa8.73□□□□□ -1.01
PTCH1-207ENST00000429896 DMXL1Q9Y485 3027 aa8.72□□□□□ -1.01
PTCH1-207ENST00000429896 TRAV7A0A075B6U4 112 aa8.72□□□□□ -1.01
PTCH1-207ENST00000429896 MOBPQ13875 183 aa8.72□□□□□ -1.01
PTCH1-207ENST00000429896 IGLV5-39A0A0G2JS06 123 aa8.71□□□□□ -1.02
PTCH1-207ENST00000429896 DMXL2Q8TDJ6 3036 aa8.7□□□□□ -1.02
PTCH1-207ENST00000429896 IGLV8-61A0A075B6I0 122 aa8.7□□□□□ -1.02
PTCH1-207ENST00000429896 IMUPQ9GZP8 106 aa8.7□□□□□ -1.02
PTCH1-207ENST00000429896 KRTAP21-3Q3LHN1 58 aa8.69□□□□□ -1.02
PTCH1-207ENST00000429896 GVQW2A0A096LPI5 108 aaPredicted RBP8.69□□□□□ -1.02
PTCH1-207ENST00000429896 KIAA0087Q14695 138 aa8.69□□□□□ -1.02
PTCH1-207ENST00000429896 CASC10Q5T4H9 136 aa8.69□□□□□ -1.02
PTCH1-207ENST00000429896 C6orf48Q9UBA6 75 aa8.69□□□□□ -1.02
PTCH1-207ENST00000429896 IGLV5-45A0A087WSX0 123 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms