RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 ZNF22P17026 224 aaPredicted RBP5.74□□□□□ -1.49
TRIM39-208ENST00000428555 MTURNQ8N3F0 131 aa5.74□□□□□ -1.49
TRIM39-208ENST00000428555 LRP2P98164 4655 aa5.74□□□□□ -1.49
TRIM39-208ENST00000428555 IGLV5-39A0A0G2JS06 123 aa5.73□□□□□ -1.49
TRIM39-208ENST00000428555 H0Y9J4 135 aa5.73□□□□□ -1.49
TRIM39-208ENST00000428555 HSBP1O75506 76 aa5.73□□□□□ -1.49
TRIM39-208ENST00000428555 CBLN2Q8IUK8 224 aa5.73□□□□□ -1.49
TRIM39-208ENST00000428555 PRR26Q8N8Z3 221 aa5.73□□□□□ -1.49
TRIM39-208ENST00000428555 C11orf86A6NJI1 115 aa5.72□□□□□ -1.49
TRIM39-208ENST00000428555 SMIM6P0DI80 62 aa5.72□□□□□ -1.49
TRIM39-208ENST00000428555 PFN2P35080 140 aa5.72□□□□□ -1.49
TRIM39-208ENST00000428555 MRPL55Q7Z7F7 128 aaKnown RBP5.72□□□□□ -1.49
TRIM39-208ENST00000428555 LINC00167Q96N53 147 aa5.72□□□□□ -1.49
TRIM39-208ENST00000428555 RPL37AP8A6NKH3 93 aa5.71□□□□□ -1.5
TRIM39-208ENST00000428555 TMEM170BQ5T4T1 132 aa5.71□□□□□ -1.5
TRIM39-208ENST00000428555 CHCHD1Q96BP2 118 aaKnown RBP5.71□□□□□ -1.5
TRIM39-208ENST00000428555 ZNF625Q96I27 306 aaPredicted RBP5.71□□□□□ -1.5
TRIM39-208ENST00000428555 TP73-AS1Q9UF72 201 aa5.71□□□□□ -1.5
TRIM39-208ENST00000428555 A0A1B0GV90 55 aa5.7□□□□□ -1.5
TRIM39-208ENST00000428555 NUPR1O60356 82 aa5.7□□□□□ -1.5
TRIM39-208ENST00000428555 ZNF861PO60384 105 aa5.7□□□□□ -1.5
TRIM39-208ENST00000428555 TSPAN13O95857 204 aa5.7□□□□□ -1.5
TRIM39-208ENST00000428555 TRGC2P03986 189 aa5.7□□□□□ -1.5
TRIM39-208ENST00000428555 KRTAP1-4P0C5Y4 121 aa5.7□□□□□ -1.5
TRIM39-208ENST00000428555 FAM19A2Q8N3H0 131 aa5.7□□□□□ -1.5
TRIM39-208ENST00000428555 IFI27L1Q96BM0 104 aa5.7□□□□□ -1.5
TRIM39-208ENST00000428555 V9GYY9 64 aa5.7□□□□□ -1.5
TRIM39-208ENST00000428555 SCO1O75880 301 aa5.69□□□□□ -1.5
TRIM39-208ENST00000428555 ERG28Q9UKR5 140 aa5.69□□□□□ -1.5
TRIM39-208ENST00000428555 IGLV5-37A0A075B6J1 123 aa5.68□□□□□ -1.5
TRIM39-208ENST00000428555 TRAV12-1A0A0B4J245 112 aa5.68□□□□□ -1.5
TRIM39-208ENST00000428555 TSTD3H0UI37 97 aa5.68□□□□□ -1.5
TRIM39-208ENST00000428555 NKAPP1Q8N9T2 125 aa5.68□□□□□ -1.5
TRIM39-208ENST00000428555 SND1-IT1Q9HBX3 110 aa5.68□□□□□ -1.5
TRIM39-208ENST00000428555 IGLV1-50A0A075B6I6 118 aa5.67□□□□□ -1.5
TRIM39-208ENST00000428555 TMEM223A0PJW6 202 aa5.67□□□□□ -1.5
TRIM39-208ENST00000428555 BCE1O60756 84 aa5.67□□□□□ -1.5
TRIM39-208ENST00000428555 SNRPEP62304 92 aaKnown RBP5.67□□□□□ -1.5
TRIM39-208ENST00000428555 COX17Q14061 63 aa5.67□□□□□ -1.5
TRIM39-208ENST00000428555 COLCA2A8K830 154 aa5.66□□□□□ -1.5
TRIM39-208ENST00000428555 SERF1AO75920 110 aa5.66□□□□□ -1.5
TRIM39-208ENST00000428555 RPL28P46779 137 aaKnown RBP5.66□□□□□ -1.5
TRIM39-208ENST00000428555 LINC00158P58513 81 aa5.66□□□□□ -1.5
TRIM39-208ENST00000428555 IGKV2-28A0A075B6P5 120 aa5.65□□□□□ -1.5
TRIM39-208ENST00000428555 IGKV2D-28P01615 120 aa5.65□□□□□ -1.5
TRIM39-208ENST00000428555 LINC00310P59036 64 aa5.65□□□□□ -1.5
TRIM39-208ENST00000428555 Q8NDZ9 215 aa5.65□□□□□ -1.5
TRIM39-208ENST00000428555 RNF213Q63HN8 5207 aa5.65□□□□□ -1.51
TRIM39-208ENST00000428555 LEPROTL1O95214 131 aa5.64□□□□□ -1.51
TRIM39-208ENST00000428555 FABP4P15090 132 aa5.64□□□□□ -1.51
TRIM39-208ENST00000428555 RPL24P83731 157 aaKnown RBP5.64□□□□□ -1.51
TRIM39-208ENST00000428555 SFTA2Q6UW10 78 aa5.64□□□□□ -1.51
TRIM39-208ENST00000428555 SMIM13P0DJ93 91 aa5.63□□□□□ -1.51
TRIM39-208ENST00000428555 UBE2AP49459 152 aa5.63□□□□□ -1.51
TRIM39-208ENST00000428555 KRTAP13-1Q8IUC0 172 aa5.63□□□□□ -1.51
TRIM39-208ENST00000428555 ANAPC11Q9NYG5 84 aa5.63□□□□□ -1.51
TRIM39-208ENST00000428555 DLEU1O43261 78 aa5.62□□□□□ -1.51
TRIM39-208ENST00000428555 RPL13AP40429 203 aaKnown RBP5.62□□□□□ -1.51
TRIM39-208ENST00000428555 LPAP08519 4548 aa5.62□□□□□ -1.51
TRIM39-208ENST00000428555 TMEM126AQ9H061 195 aa5.61□□□□□ -1.51
TRIM39-208ENST00000428555 NDUFA12Q9UI09 145 aa5.61□□□□□ -1.51
TRIM39-208ENST00000428555 A0A087X002 238 aa5.6□□□□□ -1.51
TRIM39-208ENST00000428555 M0R378 163 aa5.6□□□□□ -1.51
TRIM39-208ENST00000428555 CRYGAP11844 174 aa5.6□□□□□ -1.51
TRIM39-208ENST00000428555 PRLHP81277 87 aa5.6□□□□□ -1.51
TRIM39-208ENST00000428555 MEIG1Q5JSS6 88 aa5.6□□□□□ -1.51
TRIM39-208ENST00000428555 LCE2AQ5TA79 106 aaPredicted RBP5.6□□□□□ -1.51
TRIM39-208ENST00000428555 FAM19A1Q7Z5A9 133 aa5.6□□□□□ -1.51
TRIM39-208ENST00000428555 MIR7-3HGQ8N6C7 128 aa5.6□□□□□ -1.51
TRIM39-208ENST00000428555 PMCHL2Q9BQD1 86 aa5.6□□□□□ -1.51
TRIM39-208ENST00000428555 SPANXB1Q9NS25 103 aaPredicted RBP5.6□□□□□ -1.51
TRIM39-208ENST00000428555 HSPB8Q9UJY1 196 aa5.6□□□□□ -1.51
TRIM39-208ENST00000428555 MYMXA0A1B0GTQ4 84 aa5.59□□□□□ -1.51
TRIM39-208ENST00000428555 LEPROTO15243 131 aa5.59□□□□□ -1.51
TRIM39-208ENST00000428555 DPM2O94777 84 aa5.59□□□□□ -1.51
TRIM39-208ENST00000428555 TSPEAR-AS2P59090 65 aa5.59□□□□□ -1.51
TRIM39-208ENST00000428555 GAGE2AQ6NT46 116 aa5.59□□□□□ -1.51
TRIM39-208ENST00000428555 PLNP26678 52 aa5.58□□□□□ -1.52
TRIM39-208ENST00000428555 UBE2V1Q13404 147 aa5.58□□□□□ -1.52
TRIM39-208ENST00000428555 TYMSOSQ8TAI1 123 aa5.58□□□□□ -1.52
TRIM39-208ENST00000428555 PLEKHB2Q96CS7 222 aa5.58□□□□□ -1.52
TRIM39-208ENST00000428555 J3QQQ9 107 aa5.57□□□□□ -1.52
TRIM39-208ENST00000428555 IGKCP01834 107 aa5.57□□□□□ -1.52
TRIM39-208ENST00000428555 KRTAP13-2Q52LG2 175 aa5.57□□□□□ -1.52
TRIM39-208ENST00000428555 A0A0A0MQY5 61 aa5.56□□□□□ -1.52
TRIM39-208ENST00000428555 B5MCH6 92 aa5.56□□□□□ -1.52
TRIM39-208ENST00000428555 NCR3O14931 201 aa5.56□□□□□ -1.52
TRIM39-208ENST00000428555 HIST1H2BKO60814 126 aa5.56□□□□□ -1.52
TRIM39-208ENST00000428555 HIST1H2BJP06899 126 aa5.56□□□□□ -1.52
TRIM39-208ENST00000428555 HIST1H2BOP23527 126 aa5.56□□□□□ -1.52
TRIM39-208ENST00000428555 HIST1H2BBP33778 126 aa5.56□□□□□ -1.52
TRIM39-208ENST00000428555 HIST1H2BDP58876 126 aa5.56□□□□□ -1.52
TRIM39-208ENST00000428555 HERVK_113P61574 105 aa5.56□□□□□ -1.52
TRIM39-208ENST00000428555 HIST1H2BCP62807 126 aa5.56□□□□□ -1.52
TRIM39-208ENST00000428555 PRR4Q16378 134 aa5.56□□□□□ -1.52
TRIM39-208ENST00000428555 HIST2H2BEQ16778 126 aa5.56□□□□□ -1.52
TRIM39-208ENST00000428555 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.56□□□□□ -1.52
TRIM39-208ENST00000428555 DAND5Q8N907 189 aa5.56□□□□□ -1.52
TRIM39-208ENST00000428555 HIST1H2BHQ93079 126 aa5.56□□□□□ -1.52
TRIM39-208ENST00000428555 HIST1H2BNQ99877 126 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms