RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 SOSTDC1Q6X4U4 206 aa3.37□□□□□ -1.87
LINC00458-202ENST00000427299 Q8IZM0 81 aa3.37□□□□□ -1.87
LINC00458-202ENST00000427299 KIR2DL5BQ8NHK3 375 aa3.37□□□□□ -1.87
LINC00458-202ENST00000427299 ORMDL1Q9P0S3 153 aa3.37□□□□□ -1.87
LINC00458-202ENST00000427299 TOMM7Q9P0U1 55 aa3.37□□□□□ -1.87
LINC00458-202ENST00000427299 CHD8Q9HCK8 2581 aa3.37□□□□□ -1.87
LINC00458-202ENST00000427299 WNK1Q9H4A3 2382 aa3.37□□□□□ -1.87
LINC00458-202ENST00000427299 NDUFC2O95298 119 aa3.36□□□□□ -1.87
LINC00458-202ENST00000427299 IGLV1-51P01701 117 aa3.36□□□□□ -1.87
LINC00458-202ENST00000427299 GIG44P09565 113 aaPredicted RBP3.36□□□□□ -1.87
LINC00458-202ENST00000427299 COX17Q14061 63 aa3.36□□□□□ -1.87
LINC00458-202ENST00000427299 SS18Q15532 418 aa3.36□□□□□ -1.87
LINC00458-202ENST00000427299 C9orf153Q5TBE3 101 aa3.36□□□□□ -1.87
LINC00458-202ENST00000427299 NTM-AS1Q6ZSK4 140 aa3.36□□□□□ -1.87
LINC00458-202ENST00000427299 C16orf95Q9H693 158 aa3.36□□□□□ -1.87
LINC00458-202ENST00000427299 COL12A1Q99715 3063 aa3.36□□□□□ -1.87
LINC00458-202ENST00000427299 SPG11Q96JI7 2443 aa3.35□□□□□ -1.87
LINC00458-202ENST00000427299 MYO9AB2RTY4 2548 aa3.35□□□□□ -1.87
LINC00458-202ENST00000427299 IGHV3OR16-9A0A0B4J2B5 98 aa3.35□□□□□ -1.87
LINC00458-202ENST00000427299 SMIM9A6NGZ8 99 aa3.35□□□□□ -1.87
LINC00458-202ENST00000427299 CCDC179H3BU77 68 aa3.35□□□□□ -1.87
LINC00458-202ENST00000427299 OXTP01178 125 aa3.35□□□□□ -1.87
LINC00458-202ENST00000427299 LINC00336Q6ZUF6 198 aa3.35□□□□□ -1.87
LINC00458-202ENST00000427299 KRTAP11-1Q8IUC1 163 aa3.35□□□□□ -1.87
LINC00458-202ENST00000427299 C3orf22Q8N5N4 141 aa3.35□□□□□ -1.87
LINC00458-202ENST00000427299 LINC00337Q8N6G1 96 aa3.35□□□□□ -1.87
LINC00458-202ENST00000427299 ACACBO00763 2458 aa3.35□□□□□ -1.87
LINC00458-202ENST00000427299 USP9XQ93008 2570 aaPredicted RBP3.34□□□□□ -1.87
LINC00458-202ENST00000427299 IGLV8-61A0A075B6I0 122 aa3.34□□□□□ -1.87
LINC00458-202ENST00000427299 PLAC8L1A1L4L8 177 aa3.34□□□□□ -1.87
LINC00458-202ENST00000427299 LYRM9A8MSI8 78 aa3.34□□□□□ -1.87
LINC00458-202ENST00000427299 TMEM256-PLSCR3K7ERE1 68 aa3.34□□□□□ -1.87
LINC00458-202ENST00000427299 CCL18P55774 89 aa3.34□□□□□ -1.87
LINC00458-202ENST00000427299 HIST1H4AP62805 103 aaKnown RBP3.34□□□□□ -1.87
LINC00458-202ENST00000427299 RPL18AQ02543 176 aaKnown RBP3.34□□□□□ -1.87
LINC00458-202ENST00000427299 EGFEM1PQ0D2K5 195 aa3.34□□□□□ -1.87
LINC00458-202ENST00000427299 C5orf38Q86SI9 138 aa3.34□□□□□ -1.87
LINC00458-202ENST00000427299 SMIM11BQ8TCY0 68 aa3.34□□□□□ -1.87
LINC00458-202ENST00000427299 LINC00526Q96FQ7 95 aa3.34□□□□□ -1.87
LINC00458-202ENST00000427299 OBSCN-AS1Q96MR7 158 aa3.34□□□□□ -1.87
LINC00458-202ENST00000427299 Q9UF83 564 aa3.34□□□□□ -1.87
LINC00458-202ENST00000427299 PRO0255Q9UI72 69 aa3.34□□□□□ -1.87
LINC00458-202ENST00000427299 KLK5Q9Y337 293 aaPredicted RBP3.34□□□□□ -1.87
LINC00458-202ENST00000427299 CELSR2Q9HCU4 2923 aa3.34□□□□□ -1.87
LINC00458-202ENST00000427299 NAV2Q8IVL1 2488 aa3.33□□□□□ -1.88
LINC00458-202ENST00000427299 IGKV2-28A0A075B6P5 120 aa3.33□□□□□ -1.88
LINC00458-202ENST00000427299 IGKV3OR2-268A0A0C4DH90 116 aa3.33□□□□□ -1.88
LINC00458-202ENST00000427299 LINC00959A0A1B0GUT2 108 aa3.33□□□□□ -1.88
LINC00458-202ENST00000427299 J3KT08 172 aa3.33□□□□□ -1.88
LINC00458-202ENST00000427299 LECT2O14960 151 aa3.33□□□□□ -1.88
LINC00458-202ENST00000427299 IGKV2D-28P01615 120 aa3.33□□□□□ -1.88
LINC00458-202ENST00000427299 COX7CP15954 63 aa3.33□□□□□ -1.88
LINC00458-202ENST00000427299 TMEM258P61165 79 aa3.33□□□□□ -1.88
LINC00458-202ENST00000427299 OR13C6PQ8NH95 151 aa3.33□□□□□ -1.88
LINC00458-202ENST00000427299 MRAPQ8TCY5 172 aa3.33□□□□□ -1.88
LINC00458-202ENST00000427299 SMCR5Q8TEV8 140 aa3.33□□□□□ -1.88
LINC00458-202ENST00000427299 LINC00167Q96N53 147 aa3.33□□□□□ -1.88
LINC00458-202ENST00000427299 CELA1Q9UNI1 258 aa3.33□□□□□ -1.88
LINC00458-202ENST00000427299 MYO18BQ8IUG5 2567 aa3.33□□□□□ -1.88
LINC00458-202ENST00000427299 PIEZO1Q92508 2521 aa3.32□□□□□ -1.88
LINC00458-202ENST00000427299 IGLV4-60A0A075B6I1 120 aa3.32□□□□□ -1.88
LINC00458-202ENST00000427299 TRBV10-3A0A0K0K1G6 114 aa3.32□□□□□ -1.88
LINC00458-202ENST00000427299 hADV29S1A0JD25 119 aa3.32□□□□□ -1.88
LINC00458-202ENST00000427299 PRM2P04554 102 aa3.32□□□□□ -1.88
LINC00458-202ENST00000427299 CRYGAP11844 174 aa3.32□□□□□ -1.88
LINC00458-202ENST00000427299 PDE6GP18545 87 aa3.32□□□□□ -1.88
LINC00458-202ENST00000427299 PFN2P35080 140 aa3.32□□□□□ -1.88
LINC00458-202ENST00000427299 APOC4P55056 127 aa3.32□□□□□ -1.88
LINC00458-202ENST00000427299 NKAPP1Q8N9T2 125 aa3.32□□□□□ -1.88
LINC00458-202ENST00000427299 UBL5Q9BZL1 73 aa3.32□□□□□ -1.88
LINC00458-202ENST00000427299 C14orf132Q9NPU4 83 aa3.32□□□□□ -1.88
LINC00458-202ENST00000427299 FAM208BQ5VWN6 2430 aa3.32□□□□□ -1.88
LINC00458-202ENST00000427299 USP9YO00507 2555 aaPredicted RBP3.31□□□□□ -1.88
LINC00458-202ENST00000427299 LRRK2Q5S007 2527 aa3.31□□□□□ -1.88
LINC00458-202ENST00000427299 XCL1P47992 114 aa3.31□□□□□ -1.88
LINC00458-202ENST00000427299 SMIM20Q8N5G0 67 aa3.31□□□□□ -1.88
LINC00458-202ENST00000427299 LINC01006Q8NI28 216 aa3.31□□□□□ -1.88
LINC00458-202ENST00000427299 C11orf68Q9H3H3 251 aaKnown RBP3.31□□□□□ -1.88
LINC00458-202ENST00000427299 UBR5O95071 2799 aaPredicted RBP3.31□□□□□ -1.88
LINC00458-202ENST00000427299 IGSF10Q6WRI0 2623 aa3.31□□□□□ -1.88
LINC00458-202ENST00000427299 TLN2Q9Y4G6 2542 aa3.31□□□□□ -1.88
LINC00458-202ENST00000427299 UTP20O75691 2785 aaKnown RBP3.3□□□□□ -1.88
LINC00458-202ENST00000427299 SETXQ7Z333 2677 aaKnown RBP3.3□□□□□ -1.88
LINC00458-202ENST00000427299 FAM168BA1KXE4 195 aa3.3□□□□□ -1.88
LINC00458-202ENST00000427299 NDUFC2-KCTD14E9PQ53 114 aa3.3□□□□□ -1.88
LINC00458-202ENST00000427299 BCE1O60756 84 aa3.3□□□□□ -1.88
LINC00458-202ENST00000427299 CCKP06307 115 aa3.3□□□□□ -1.88
LINC00458-202ENST00000427299 SERP2Q8N6R1 65 aa3.3□□□□□ -1.88
LINC00458-202ENST00000427299 WFDC10AQ9H1F0 79 aa3.3□□□□□ -1.88
LINC00458-202ENST00000427299 ANK3Q12955 4377 aaKnown RBP3.3□□□□□ -1.88
LINC00458-202ENST00000427299 MXRA5Q9NR99 2828 aa3.29□□□□□ -1.88
LINC00458-202ENST00000427299 ZANQ9Y493 2812 aa3.29□□□□□ -1.88
LINC00458-202ENST00000427299 FLNCQ14315 2725 aa3.29□□□□□ -1.88
LINC00458-202ENST00000427299 CFAP46Q8IYW2 2715 aa3.29□□□□□ -1.88
LINC00458-202ENST00000427299 LOC110117498A0A087WWA1 95 aa3.29□□□□□ -1.88
LINC00458-202ENST00000427299 ANGP03950 147 aaKnown RBP3.29□□□□□ -1.88
LINC00458-202ENST00000427299 DEFB130BP0DP73 79 aa3.29□□□□□ -1.88
LINC00458-202ENST00000427299 DEFB130AP0DP74 79 aa3.29□□□□□ -1.88
LINC00458-202ENST00000427299 MIFP14174 115 aa3.29□□□□□ -1.88
LINC00458-202ENST00000427299 DAD1P61803 113 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms