RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 V9GYY9 64 aa13.56□□□□□ -0.24
HCG18-235ENST00000426882 F8P00451 2351 aa13.56□□□□□ -0.24
HCG18-235ENST00000426882 SMIM26A0A096LP01 95 aa13.56□□□□□ -0.24
HCG18-235ENST00000426882 Q8N9L7 120 aa13.55□□□□□ -0.24
HCG18-235ENST00000426882 BPTFQ12830 3046 aa13.55□□□□□ -0.24
HCG18-235ENST00000426882 C22orf24Q9Y442 160 aa13.54□□□□□ -0.24
HCG18-235ENST00000426882 PRLHP81277 87 aa13.53□□□□□ -0.24
HCG18-235ENST00000426882 SERP1Q9Y6X1 66 aa13.53□□□□□ -0.24
HCG18-235ENST00000426882 HECTD1Q9ULT8 2610 aa13.51□□□□□ -0.25
HCG18-235ENST00000426882 DEFB116Q30KQ4 102 aa13.51□□□□□ -0.25
HCG18-235ENST00000426882 SPATA3Q8NHX4 192 aa13.51□□□□□ -0.25
HCG18-235ENST00000426882 CXCL6P80162 114 aa13.48□□□□□ -0.25
HCG18-235ENST00000426882 KIAA0087Q14695 138 aa13.48□□□□□ -0.25
HCG18-235ENST00000426882 TMEM254Q8TBM7 123 aa13.48□□□□□ -0.25
HCG18-235ENST00000426882 SVIPQ8NHG7 77 aa13.48□□□□□ -0.25
HCG18-235ENST00000426882 Q8NAQ8 132 aa13.47□□□□□ -0.25
HCG18-235ENST00000426882 H3BNG1 76 aa13.47□□□□□ -0.25
HCG18-235ENST00000426882 IGLV5-52A0A0A0MRZ9 124 aa13.46□□□□□ -0.25
HCG18-235ENST00000426882 CIRBP-AS1Q8TBR5 109 aa13.46□□□□□ -0.26
HCG18-235ENST00000426882 SMCR5Q8TEV8 140 aa13.45□□□□□ -0.26
HCG18-235ENST00000426882 LINC00167Q96N53 147 aa13.45□□□□□ -0.26
HCG18-235ENST00000426882 USP24Q9UPU5 2620 aa13.45□□□□□ -0.26
HCG18-235ENST00000426882 IGHV6-1A0A0B4J1U7 121 aa13.44□□□□□ -0.26
HCG18-235ENST00000426882 A6NED7 52 aa13.43□□□□□ -0.26
HCG18-235ENST00000426882 A0A096LNT2 108 aa13.42□□□□□ -0.26
HCG18-235ENST00000426882 A0A0C4DFX4 3053 aa13.42□□□□□ -0.26
HCG18-235ENST00000426882 ELOF1P60002 83 aaKnown RBP13.41□□□□□ -0.26
HCG18-235ENST00000426882 LAMA3Q16787 3333 aa13.41□□□□□ -0.26
HCG18-235ENST00000426882 EIF4EBP3O60516 100 aaPredicted RBP13.4□□□□□ -0.26
HCG18-235ENST00000426882 MKI67P46013 3256 aaKnown RBP13.4□□□□□ -0.26
HCG18-235ENST00000426882 HCG22E2RYF7 251 aa13.4□□□□□ -0.26
HCG18-235ENST00000426882 CSNK1G2-AS1Q8NCQ2 148 aa13.4□□□□□ -0.26
HCG18-235ENST00000426882 TRBV7-6A0A0J9YX20 115 aa13.39□□□□□ -0.27
HCG18-235ENST00000426882 KRTAP24-1Q3LI83 254 aa13.38□□□□□ -0.27
HCG18-235ENST00000426882 PRR15LQ9BU68 103 aa13.38□□□□□ -0.27
HCG18-235ENST00000426882 TRANK1O15050 2925 aa13.37□□□□□ -0.27
HCG18-235ENST00000426882 Q6ZQT0 140 aa13.37□□□□□ -0.27
HCG18-235ENST00000426882 CENPEQ02224 2701 aa13.35□□□□□ -0.27
HCG18-235ENST00000426882 H0Y9P7 68 aa13.35□□□□□ -0.27
HCG18-235ENST00000426882 C1orf134Q5TEV5 83 aa13.35□□□□□ -0.27
HCG18-235ENST00000426882 CRYGAP11844 174 aa13.35□□□□□ -0.27
HCG18-235ENST00000426882 PCOTHQ58A44 107 aa13.34□□□□□ -0.27
HCG18-235ENST00000426882 MGAM2Q2M2H8 2515 aa13.33□□□□□ -0.28
HCG18-235ENST00000426882 LOC110117498A0A087WWA1 95 aa13.32□□□□□ -0.28
HCG18-235ENST00000426882 SMIM29Q86T20 159 aa13.32□□□□□ -0.28
HCG18-235ENST00000426882 GIG44P09565 113 aaPredicted RBP13.31□□□□□ -0.28
HCG18-235ENST00000426882 GVQW2A0A096LPI5 108 aaPredicted RBP13.31□□□□□ -0.28
HCG18-235ENST00000426882 NHLRC4P0CG21 123 aaPredicted RBP13.3□□□□□ -0.28
HCG18-235ENST00000426882 Q6ZRX8 168 aa13.3□□□□□ -0.28
HCG18-235ENST00000426882 BRCA2P51587 3418 aa13.3□□□□□ -0.28
HCG18-235ENST00000426882 MDFIQ99750 246 aa13.3□□□□□ -0.28
HCG18-235ENST00000426882 CFAP54Q96N23 3096 aa13.3□□□□□ -0.28
HCG18-235ENST00000426882 FLNAP21333 2647 aaKnown RBP13.3□□□□□ -0.28
HCG18-235ENST00000426882 LINC00588Q9Y4M8 146 aa13.29□□□□□ -0.28
HCG18-235ENST00000426882 LAMA2P24043 3122 aaKnown RBP13.29□□□□□ -0.28
HCG18-235ENST00000426882 C19orf73Q9NVV2 129 aa13.28□□□□□ -0.28
HCG18-235ENST00000426882 BCE1O60756 84 aa13.27□□□□□ -0.29
HCG18-235ENST00000426882 Q6ZRP5 223 aa13.27□□□□□ -0.29
HCG18-235ENST00000426882 IGLV6-57P01721 117 aa13.27□□□□□ -0.29
HCG18-235ENST00000426882 VPREB1P12018 145 aa13.27□□□□□ -0.29
HCG18-235ENST00000426882 Q8NBF4 154 aa13.26□□□□□ -0.29
HCG18-235ENST00000426882 ST20-AS1Q8NBB2 130 aa13.24□□□□□ -0.29
HCG18-235ENST00000426882 A0A1B0GW54 56 aa13.24□□□□□ -0.29
HCG18-235ENST00000426882 PSPHP1O15172 72 aa13.23□□□□□ -0.29
HCG18-235ENST00000426882 RETNLBQ9BQ08 111 aa13.23□□□□□ -0.29
HCG18-235ENST00000426882 hDV103S1A0JD37 113 aa13.23□□□□□ -0.29
HCG18-235ENST00000426882 LINC00476Q8WZB0 136 aa13.23□□□□□ -0.29
HCG18-235ENST00000426882 K7ERS5 55 aa13.22□□□□□ -0.29
HCG18-235ENST00000426882 PHF5AQ7RTV0 110 aaKnown RBP13.22□□□□□ -0.29
HCG18-235ENST00000426882 ZNF575Q86XF7 245 aa13.21□□□□□ -0.29
HCG18-235ENST00000426882 C1orf64Q8NEQ6 169 aa13.21□□□□□ -0.29
HCG18-235ENST00000426882 C1orf195Q5TG92 126 aa13.21□□□□□ -0.3
HCG18-235ENST00000426882 ITPR3Q14573 2671 aa13.2□□□□□ -0.3
HCG18-235ENST00000426882 DNAH10OSP0CZ25 163 aa13.2□□□□□ -0.3
HCG18-235ENST00000426882 MGAQ8IWI9 3026 aa13.18□□□□□ -0.3
HCG18-235ENST00000426882 C16orf90A8MZG2 172 aa13.17□□□□□ -0.3
HCG18-235ENST00000426882 PRR34Q9NV39 138 aa13.17□□□□□ -0.3
HCG18-235ENST00000426882 MOBPQ13875 183 aa13.17□□□□□ -0.3
HCG18-235ENST00000426882 LINC00612Q8N6U2 182 aa13.16□□□□□ -0.3
HCG18-235ENST00000426882 TM2D3Q9BRN9 247 aa13.16□□□□□ -0.3
HCG18-235ENST00000426882 EPM2AB3EWF7 344 aa13.15□□□□□ -0.3
HCG18-235ENST00000426882 KRTAP10-3P60369 221 aa13.15□□□□□ -0.3
HCG18-235ENST00000426882 ATRQ13535 2644 aa13.15□□□□□ -0.3
HCG18-235ENST00000426882 FAM168BA1KXE4 195 aa13.14□□□□□ -0.31
HCG18-235ENST00000426882 SERTAD4-AS1Q5TG53 156 aa13.13□□□□□ -0.31
HCG18-235ENST00000426882 NBDYA0A0U1RRE5 68 aa13.13□□□□□ -0.31
HCG18-235ENST00000426882 CHTF8P0CG12 524 aa13.13□□□□□ -0.31
HCG18-235ENST00000426882 PMAIP1Q13794 54 aa13.11□□□□□ -0.31
HCG18-235ENST00000426882 LINC00528Q8N1L1 170 aa13.11□□□□□ -0.31
HCG18-235ENST00000426882 PRUNE2Q8WUY3 3088 aa13.1□□□□□ -0.31
HCG18-235ENST00000426882 ZNF292O60281 2723 aa13.1□□□□□ -0.31
HCG18-235ENST00000426882 RPS28P62857 69 aaKnown RBP13.1□□□□□ -0.31
HCG18-235ENST00000426882 KRTAP1-3Q8IUG1 177 aa13.1□□□□□ -0.31
HCG18-235ENST00000426882 CFAP46Q8IYW2 2715 aa13.09□□□□□ -0.31
HCG18-235ENST00000426882 UNC80Q8N2C7 3258 aa13.09□□□□□ -0.31
HCG18-235ENST00000426882 KRTAP10-11P60412 298 aa13.08□□□□□ -0.31
HCG18-235ENST00000426882 KCNQ1DNQ9H478 68 aa13.08□□□□□ -0.31
HCG18-235ENST00000426882 WDFY4Q6ZS81 3184 aa13.07□□□□□ -0.32
HCG18-235ENST00000426882 MAST4O15021 2626 aa13.07□□□□□ -0.32
HCG18-235ENST00000426882 LIMD2Q9BT23 127 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms