RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 PACRGQ96M98 296 aaPredicted RBP3.8□□□□□ -1.8
NIF3L1-207ENST00000426253 TIMM17AQ99595 171 aa3.8□□□□□ -1.8
NIF3L1-207ENST00000426253 GEMIN7Q9H840 131 aaKnown RBP3.8□□□□□ -1.8
NIF3L1-207ENST00000426253 TOMM7Q9P0U1 55 aa3.8□□□□□ -1.8
NIF3L1-207ENST00000426253 TRBV30A0A0K0K1B3 111 aa3.79□□□□□ -1.8
NIF3L1-207ENST00000426253 LINC01546A6NGU7 62 aa3.79□□□□□ -1.8
NIF3L1-207ENST00000426253 LINC01549A6NIU2 74 aa3.79□□□□□ -1.8
NIF3L1-207ENST00000426253 APOC3P02656 99 aa3.79□□□□□ -1.8
NIF3L1-207ENST00000426253 MT-ND6P03923 174 aa3.79□□□□□ -1.8
NIF3L1-207ENST00000426253 CKS1BP61024 79 aa3.79□□□□□ -1.8
NIF3L1-207ENST00000426253 HERVK_113P63121 156 aa3.79□□□□□ -1.8
NIF3L1-207ENST00000426253 FA2HQ7L5A8 372 aa3.79□□□□□ -1.8
NIF3L1-207ENST00000426253 PHF5AQ7RTV0 110 aaKnown RBP3.79□□□□□ -1.8
NIF3L1-207ENST00000426253 SMCO4Q9NRQ5 59 aa3.79□□□□□ -1.8
NIF3L1-207ENST00000426253 CDKN2A-AS1Q9UH64 79 aa3.79□□□□□ -1.8
NIF3L1-207ENST00000426253 TRAPPC1Q9Y5R8 145 aa3.79□□□□□ -1.8
NIF3L1-207ENST00000426253 FAM168BA1KXE4 195 aa3.78□□□□□ -1.8
NIF3L1-207ENST00000426253 SNAPINO95295 136 aa3.78□□□□□ -1.8
NIF3L1-207ENST00000426253 KRTAP7-1Q8IUC3 87 aa3.78□□□□□ -1.8
NIF3L1-207ENST00000426253 Q8IZM0 81 aa3.78□□□□□ -1.8
NIF3L1-207ENST00000426253 LINC01600Q96MT4 127 aa3.78□□□□□ -1.8
NIF3L1-207ENST00000426253 CST9LQ9H4G1 147 aa3.78□□□□□ -1.8
NIF3L1-207ENST00000426253 PSORS1C2Q9UIG4 136 aa3.78□□□□□ -1.8
NIF3L1-207ENST00000426253 TINCRA0A1B0GVN0 87 aa3.77□□□□□ -1.81
NIF3L1-207ENST00000426253 NDUFC2-KCTD14E9PQ53 114 aa3.77□□□□□ -1.81
NIF3L1-207ENST00000426253 LINC00614P0C842 121 aa3.77□□□□□ -1.81
NIF3L1-207ENST00000426253 PMVKQ15126 192 aa3.77□□□□□ -1.81
NIF3L1-207ENST00000426253 NDUFA5Q16718 116 aa3.77□□□□□ -1.81
NIF3L1-207ENST00000426253 PDZD11Q5EBL8 140 aa3.77□□□□□ -1.81
NIF3L1-207ENST00000426253 C1orf137Q5JT78 98 aa3.77□□□□□ -1.81
NIF3L1-207ENST00000426253 REG3GQ6UW15 175 aa3.77□□□□□ -1.81
NIF3L1-207ENST00000426253 FAM19A5Q7Z5A7 132 aaPredicted RBP3.77□□□□□ -1.81
NIF3L1-207ENST00000426253 SVBPQ8N300 66 aa3.77□□□□□ -1.81
NIF3L1-207ENST00000426253 LINC00469Q8N7U9 141 aa3.77□□□□□ -1.81
NIF3L1-207ENST00000426253 RPL37AP8A6NKH3 93 aa3.76□□□□□ -1.81
NIF3L1-207ENST00000426253 NDUFA6P56556 154 aa3.76□□□□□ -1.81
NIF3L1-207ENST00000426253 C9orf129Q5T035 196 aaKnown RBP3.76□□□□□ -1.81
NIF3L1-207ENST00000426253 C18orf32Q8TCD1 76 aa3.76□□□□□ -1.81
NIF3L1-207ENST00000426253 COX7B2Q8TF08 81 aa3.76□□□□□ -1.81
NIF3L1-207ENST00000426253 KRTAP16-1A8MUX0 517 aa3.75□□□□□ -1.81
NIF3L1-207ENST00000426253 F8VRH5 84 aa3.75□□□□□ -1.81
NIF3L1-207ENST00000426253 IGLV7-43P04211 117 aa3.75□□□□□ -1.81
NIF3L1-207ENST00000426253 KRTAP10-8P60410 259 aa3.75□□□□□ -1.81
NIF3L1-207ENST00000426253 RAB5BP61020 215 aa3.75□□□□□ -1.81
NIF3L1-207ENST00000426253 UBE2BP63146 152 aa3.75□□□□□ -1.81
NIF3L1-207ENST00000426253 KRTAP11-1Q8IUC1 163 aa3.75□□□□□ -1.81
NIF3L1-207ENST00000426253 Q8N377 158 aa3.75□□□□□ -1.81
NIF3L1-207ENST00000426253 XAGE1AQ9HD64 81 aa3.75□□□□□ -1.81
NIF3L1-207ENST00000426253 H3BRM9 83 aa3.74□□□□□ -1.81
NIF3L1-207ENST00000426253 M0QXV9 152 aa3.74□□□□□ -1.81
NIF3L1-207ENST00000426253 HBDP02042 147 aa3.74□□□□□ -1.81
NIF3L1-207ENST00000426253 SPINK8P0C7L1 97 aa3.74□□□□□ -1.81
NIF3L1-207ENST00000426253 CXCL5P42830 114 aa3.74□□□□□ -1.81
NIF3L1-207ENST00000426253 PMCHL1Q16048 86 aa3.74□□□□□ -1.81
NIF3L1-207ENST00000426253 C22orf24Q9Y442 160 aa3.74□□□□□ -1.81
NIF3L1-207ENST00000426253 A0A096LNJ9 63 aa3.73□□□□□ -1.81
NIF3L1-207ENST00000426253 ATP5LO75964 103 aa3.73□□□□□ -1.81
NIF3L1-207ENST00000426253 BAGE3Q86Y29 109 aa3.73□□□□□ -1.81
NIF3L1-207ENST00000426253 DIRC1Q969H9 104 aa3.73□□□□□ -1.81
NIF3L1-207ENST00000426253 KRTAP2-2Q9BYT5 123 aa3.73□□□□□ -1.81
NIF3L1-207ENST00000426253 IGLC3P0DOY3 106 aa3.72□□□□□ -1.81
NIF3L1-207ENST00000426253 CHCHD1Q96BP2 118 aaKnown RBP3.72□□□□□ -1.81
NIF3L1-207ENST00000426253 YPEL4Q96NS1 127 aa3.72□□□□□ -1.81
NIF3L1-207ENST00000426253 H0Y9J4 135 aa3.71□□□□□ -1.82
NIF3L1-207ENST00000426253 PFN2P35080 140 aa3.71□□□□□ -1.82
NIF3L1-207ENST00000426253 TMEM170BQ5T4T1 132 aa3.71□□□□□ -1.82
NIF3L1-207ENST00000426253 SLC7A5P1Q8MH63 180 aa3.71□□□□□ -1.82
NIF3L1-207ENST00000426253 LINC00167Q96N53 147 aa3.71□□□□□ -1.82
NIF3L1-207ENST00000426253 CHTOPQ9Y3Y2 248 aaKnown RBP3.71□□□□□ -1.82
NIF3L1-207ENST00000426253 C11orf86A6NJI1 115 aa3.7□□□□□ -1.82
NIF3L1-207ENST00000426253 NUPR1O60356 82 aa3.7□□□□□ -1.82
NIF3L1-207ENST00000426253 ZNF861PO60384 105 aa3.7□□□□□ -1.82
NIF3L1-207ENST00000426253 ZNF22P17026 224 aaPredicted RBP3.7□□□□□ -1.82
NIF3L1-207ENST00000426253 MRPL55Q7Z7F7 128 aaKnown RBP3.7□□□□□ -1.82
NIF3L1-207ENST00000426253 CBLN2Q8IUK8 224 aa3.7□□□□□ -1.82
NIF3L1-207ENST00000426253 ZNF625Q96I27 306 aaPredicted RBP3.7□□□□□ -1.82
NIF3L1-207ENST00000426253 TP73-AS1Q9UF72 201 aa3.7□□□□□ -1.82
NIF3L1-207ENST00000426253 TRAV12-1A0A0B4J245 112 aa3.69□□□□□ -1.82
NIF3L1-207ENST00000426253 HSBP1O75506 76 aa3.69□□□□□ -1.82
NIF3L1-207ENST00000426253 TRGC2P03986 189 aa3.69□□□□□ -1.82
NIF3L1-207ENST00000426253 COX17Q14061 63 aa3.69□□□□□ -1.82
NIF3L1-207ENST00000426253 FAM19A2Q8N3H0 131 aa3.69□□□□□ -1.82
NIF3L1-207ENST00000426253 IFI27L1Q96BM0 104 aa3.69□□□□□ -1.82
NIF3L1-207ENST00000426253 TMEM223A0PJW6 202 aa3.68□□□□□ -1.82
NIF3L1-207ENST00000426253 SFTA2Q6UW10 78 aa3.68□□□□□ -1.82
NIF3L1-207ENST00000426253 NKAPP1Q8N9T2 125 aa3.68□□□□□ -1.82
NIF3L1-207ENST00000426253 ERG28Q9UKR5 140 aa3.68□□□□□ -1.82
NIF3L1-207ENST00000426253 IGLV1-50A0A075B6I6 118 aa3.67□□□□□ -1.82
NIF3L1-207ENST00000426253 COLCA2A8K830 154 aa3.67□□□□□ -1.82
NIF3L1-207ENST00000426253 BCE1O60756 84 aa3.67□□□□□ -1.82
NIF3L1-207ENST00000426253 LEPROTL1O95214 131 aa3.67□□□□□ -1.82
NIF3L1-207ENST00000426253 RPL28P46779 137 aaKnown RBP3.67□□□□□ -1.82
NIF3L1-207ENST00000426253 LINC00158P58513 81 aa3.67□□□□□ -1.82
NIF3L1-207ENST00000426253 SND1-IT1Q9HBX3 110 aa3.67□□□□□ -1.82
NIF3L1-207ENST00000426253 IGKV2-28A0A075B6P5 120 aa3.66□□□□□ -1.82
NIF3L1-207ENST00000426253 H0Y8G0 127 aa3.66□□□□□ -1.82
NIF3L1-207ENST00000426253 SCO1O75880 301 aa3.66□□□□□ -1.82
NIF3L1-207ENST00000426253 IGKV2D-28P01615 120 aa3.66□□□□□ -1.82
NIF3L1-207ENST00000426253 KRTAP1-4P0C5Y4 121 aa3.66□□□□□ -1.82
NIF3L1-207ENST00000426253 SERF1AO75920 110 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms