RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 Q8N3U1 123 aa9.01□□□□□ -0.97
COL12A1-205ENST00000425443 A0A087WYN8 130 aa9.01□□□□□ -0.97
COL12A1-205ENST00000425443 LINC00959A0A1B0GUT2 108 aa9□□□□□ -0.97
COL12A1-205ENST00000425443 HTN3P15516 51 aa9□□□□□ -0.97
COL12A1-205ENST00000425443 APOC4P55056 127 aa9□□□□□ -0.97
COL12A1-205ENST00000425443 IGHV3OR16-9A0A0B4J2B5 98 aa8.99□□□□□ -0.97
COL12A1-205ENST00000425443 CCL18P55774 89 aa8.99□□□□□ -0.97
COL12A1-205ENST00000425443 DAD1P61803 113 aa8.99□□□□□ -0.97
COL12A1-205ENST00000425443 NSD1Q96L73 2696 aaPredicted RBP8.99□□□□□ -0.97
COL12A1-205ENST00000425443 DNAL4O96015 105 aa8.98□□□□□ -0.97
COL12A1-205ENST00000425443 SLPIP03973 132 aa8.98□□□□□ -0.97
COL12A1-205ENST00000425443 PRR3P79522 188 aaKnown RBP8.98□□□□□ -0.97
COL12A1-205ENST00000425443 SMIM11BQ8TCY0 68 aa8.98□□□□□ -0.97
COL12A1-205ENST00000425443 A0A087WZ39 114 aa8.98□□□□□ -0.97
COL12A1-205ENST00000425443 LYRM9A8MSI8 78 aa8.98□□□□□ -0.97
COL12A1-205ENST00000425443 NDUFC2-KCTD14E9PQ53 114 aa8.98□□□□□ -0.97
COL12A1-205ENST00000425443 TRAV13-2A0A0B4J235 113 aa8.97□□□□□ -0.97
COL12A1-205ENST00000425443 RPL28P46779 137 aaKnown RBP8.97□□□□□ -0.97
COL12A1-205ENST00000425443 C14orf132Q9NPU4 83 aa8.97□□□□□ -0.97
COL12A1-205ENST00000425443 LINC00612Q8N6U2 182 aa8.96□□□□□ -0.97
COL12A1-205ENST00000425443 IGHV4-28A0A0C4DH34 117 aa8.96□□□□□ -0.98
COL12A1-205ENST00000425443 GHRHP01286 108 aa8.96□□□□□ -0.98
COL12A1-205ENST00000425443 INAFM2P0DMQ5 153 aa8.96□□□□□ -0.98
COL12A1-205ENST00000425443 WFDC9Q8NEX5 89 aa8.96□□□□□ -0.98
COL12A1-205ENST00000425443 ANGP03950 147 aaKnown RBP8.96□□□□□ -0.98
COL12A1-205ENST00000425443 LYPD5Q6UWN5 251 aa8.96□□□□□ -0.98
COL12A1-205ENST00000425443 LECT2O14960 151 aa8.95□□□□□ -0.98
COL12A1-205ENST00000425443 LINC00269Q8N2A0 174 aa8.95□□□□□ -0.98
COL12A1-205ENST00000425443 TRAV23DV6A0A075B6W5 121 aa8.95□□□□□ -0.98
COL12A1-205ENST00000425443 TRBV7-6A0A0J9YX20 115 aa8.94□□□□□ -0.98
COL12A1-205ENST00000425443 C9orf116Q5BN46 136 aaPredicted RBP8.94□□□□□ -0.98
COL12A1-205ENST00000425443 FLNBO75369 2602 aaKnown RBP8.94□□□□□ -0.98
COL12A1-205ENST00000425443 IBA57-AS1B1ANH7 110 aa8.94□□□□□ -0.98
COL12A1-205ENST00000425443 A0A1B0GUV1 79 aa8.94□□□□□ -0.98
COL12A1-205ENST00000425443 SNURFQ9Y675 71 aa8.94□□□□□ -0.98
COL12A1-205ENST00000425443 HIVEP1P15822 2718 aa8.93□□□□□ -0.98
COL12A1-205ENST00000425443 CCKP06307 115 aa8.93□□□□□ -0.98
COL12A1-205ENST00000425443 EPM2AB3EWF7 344 aa8.92□□□□□ -0.98
COL12A1-205ENST00000425443 PKD1L1Q8TDX9 2849 aa8.92□□□□□ -0.98
COL12A1-205ENST00000425443 NCR3O14931 201 aa8.91□□□□□ -0.98
COL12A1-205ENST00000425443 SPART-AS1P0CW21 52 aa8.91□□□□□ -0.98
COL12A1-205ENST00000425443 RBM12B-AS1Q9P1G2 102 aa8.91□□□□□ -0.98
COL12A1-205ENST00000425443 CELA1Q9UNI1 258 aa8.91□□□□□ -0.98
COL12A1-205ENST00000425443 H7BZZ5 65 aa8.9□□□□□ -0.98
COL12A1-205ENST00000425443 MIFP14174 115 aa8.9□□□□□ -0.98
COL12A1-205ENST00000425443 REG3AQ06141 175 aa8.9□□□□□ -0.98
COL12A1-205ENST00000425443 CHCHD10Q8WYQ3 142 aaPredicted RBP8.89□□□□□ -0.99
COL12A1-205ENST00000425443 IGHV4-30-4P0DP06 118 aa8.89□□□□□ -0.99
COL12A1-205ENST00000425443 FAM229BQ4G0N7 80 aa8.89□□□□□ -0.99
COL12A1-205ENST00000425443 Q8IZM0 81 aa8.89□□□□□ -0.99
COL12A1-205ENST00000425443 F8WEM9 126 aa8.88□□□□□ -0.99
COL12A1-205ENST00000425443 CD164L2Q6UWJ8 174 aa8.87□□□□□ -0.99
COL12A1-205ENST00000425443 RMI2Q96E14 147 aa8.87□□□□□ -0.99
COL12A1-205ENST00000425443 C6orf223Q8N319 242 aa8.87□□□□□ -0.99
COL12A1-205ENST00000425443 Q8NAQ8 132 aa8.87□□□□□ -0.99
COL12A1-205ENST00000425443 NANOS2P60321 138 aaKnown RBP8.87□□□□□ -0.99
COL12A1-205ENST00000425443 LINC00846Q9NV44 126 aa8.87□□□□□ -0.99
COL12A1-205ENST00000425443 NOTCH1P46531 2555 aa8.86□□□□□ -0.99
COL12A1-205ENST00000425443 Q8NDZ9 215 aa8.86□□□□□ -0.99
COL12A1-205ENST00000425443 OBSCN-AS1Q96MR7 158 aa8.86□□□□□ -0.99
COL12A1-205ENST00000425443 STAB1Q9NY15 2570 aa8.85□□□□□ -0.99
COL12A1-205ENST00000425443 H0YGX0 51 aa8.84□□□□□ -0.99
COL12A1-205ENST00000425443 KLK12Q9UKR0 248 aa8.84□□□□□ -0.99
COL12A1-205ENST00000425443 F8P00451 2351 aa8.84□□□□□ -0.99
COL12A1-205ENST00000425443 PRR15Q8IV56 129 aa8.84□□□□□ -0.99
COL12A1-205ENST00000425443 OXLD1Q5BKU9 147 aa8.83□□□□□ -1
COL12A1-205ENST00000425443 Q6ZRU5 148 aa8.83□□□□□ -1
COL12A1-205ENST00000425443 MAST4O15021 2626 aa8.83□□□□□ -1
COL12A1-205ENST00000425443 LELP1Q5T871 98 aa8.83□□□□□ -1
COL12A1-205ENST00000425443 C10orf25Q5T742 122 aa8.82□□□□□ -1
COL12A1-205ENST00000425443 KIAA0087Q14695 138 aa8.82□□□□□ -1
COL12A1-205ENST00000425443 UNQ6190/PRO20217Q6UXQ8 127 aa8.82□□□□□ -1
COL12A1-205ENST00000425443 LRCOL1A6NCL2 159 aa8.8□□□□□ -1
COL12A1-205ENST00000425443 ORMDL1Q9P0S3 153 aa8.8□□□□□ -1
COL12A1-205ENST00000425443 SPAG11BQ08648 103 aa8.8□□□□□ -1
COL12A1-205ENST00000425443 C6orf99Q4VX62 202 aa8.8□□□□□ -1
COL12A1-205ENST00000425443 FBN1P35555 2871 aaKnown RBP8.8□□□□□ -1
COL12A1-205ENST00000425443 Q6JHZ5 121 aa8.79□□□□□ -1
COL12A1-205ENST00000425443 COX17Q14061 63 aa8.79□□□□□ -1
COL12A1-205ENST00000425443 XAGE1AQ9HD64 81 aa8.79□□□□□ -1
COL12A1-205ENST00000425443 TENM3Q9P273 2699 aa8.79□□□□□ -1
COL12A1-205ENST00000425443 Q8N814 137 aa8.77□□□□□ -1.01
COL12A1-205ENST00000425443 ENHOQ6UWT2 76 aa8.76□□□□□ -1.01
COL12A1-205ENST00000425443 LINC00167Q96N53 147 aa8.76□□□□□ -1.01
COL12A1-205ENST00000425443 CYSRT1A8MQ03 144 aa8.76□□□□□ -1.01
COL12A1-205ENST00000425443 HIGD2BQ4VC39 106 aa8.75□□□□□ -1.01
COL12A1-205ENST00000425443 A8MU10 97 aa8.74□□□□□ -1.01
COL12A1-205ENST00000425443 PSPHP1O15172 72 aa8.74□□□□□ -1.01
COL12A1-205ENST00000425443 KPRPQ5T749 579 aaPredicted RBP8.74□□□□□ -1.01
COL12A1-205ENST00000425443 Q6ZTC4 211 aa8.73□□□□□ -1.01
COL12A1-205ENST00000425443 KRTAP10-11P60412 298 aa8.72□□□□□ -1.01
COL12A1-205ENST00000425443 LAMTOR3Q9UHA4 124 aa8.72□□□□□ -1.01
COL12A1-205ENST00000425443 WFDC10BQ8IUB3 73 aa8.72□□□□□ -1.01
COL12A1-205ENST00000425443 PRR34Q9NV39 138 aa8.72□□□□□ -1.01
COL12A1-205ENST00000425443 NBEAL1Q6ZS30 2694 aa8.72□□□□□ -1.01
COL12A1-205ENST00000425443 M0R2N4 97 aa8.71□□□□□ -1.01
COL12A1-205ENST00000425443 BAHCC1Q9P281 2608 aa8.7□□□□□ -1.02
COL12A1-205ENST00000425443 SCXQ7RTU7 201 aa8.7□□□□□ -1.02
COL12A1-205ENST00000425443 C8orf87E5RJ46 101 aa8.7□□□□□ -1.02
COL12A1-205ENST00000425443 COL6A5A8TX70 2615 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms