RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 C10orf25Q5T742 122 aa8.67□□□□□ -1.02
HLA-DMB-258ENST00000418107 GVQW2A0A096LPI5 108 aaPredicted RBP8.66□□□□□ -1.02
HLA-DMB-258ENST00000418107 F8WDY8 70 aa8.66□□□□□ -1.02
HLA-DMB-258ENST00000418107 TAX1BP3O14907 124 aa8.66□□□□□ -1.02
HLA-DMB-258ENST00000418107 A0A1B0GV90 55 aa8.65□□□□□ -1.02
HLA-DMB-258ENST00000418107 LECT2O14960 151 aa8.65□□□□□ -1.02
HLA-DMB-258ENST00000418107 TRBV30A0A0K0K1B3 111 aa8.64□□□□□ -1.03
HLA-DMB-258ENST00000418107 CFC1BP0CG36 223 aa8.64□□□□□ -1.03
HLA-DMB-258ENST00000418107 CFC1P0CG37 223 aa8.64□□□□□ -1.03
HLA-DMB-258ENST00000418107 SYCNQ0VAF6 134 aa8.64□□□□□ -1.03
HLA-DMB-258ENST00000418107 A0A1B0GWB2 263 aa8.63□□□□□ -1.03
HLA-DMB-258ENST00000418107 EPM2AB3EWF7 344 aa8.63□□□□□ -1.03
HLA-DMB-258ENST00000418107 Q6ZRU5 148 aa8.63□□□□□ -1.03
HLA-DMB-258ENST00000418107 C6orf48Q9UBA6 75 aa8.63□□□□□ -1.03
HLA-DMB-258ENST00000418107 MYCBP2O75592 4640 aa8.63□□□□□ -1.03
HLA-DMB-258ENST00000418107 C9orf118A6NHY6 69 aa8.62□□□□□ -1.03
HLA-DMB-258ENST00000418107 SOSTDC1Q6X4U4 206 aa8.62□□□□□ -1.03
HLA-DMB-258ENST00000418107 PRO1854Q9UHT4 67 aa8.62□□□□□ -1.03
HLA-DMB-258ENST00000418107 A0A0B4J2C4 111 aa8.61□□□□□ -1.03
HLA-DMB-258ENST00000418107 H3BUT2 72 aa8.61□□□□□ -1.03
HLA-DMB-258ENST00000418107 H7C2G1 150 aa8.61□□□□□ -1.03
HLA-DMB-258ENST00000418107 EIF4EBP3O60516 100 aaPredicted RBP8.61□□□□□ -1.03
HLA-DMB-258ENST00000418107 Q1RN00 199 aa8.61□□□□□ -1.03
HLA-DMB-258ENST00000418107 CARD19Q96LW7 228 aa8.61□□□□□ -1.03
HLA-DMB-258ENST00000418107 NAA38Q9BRA0 125 aaKnown RBP8.61□□□□□ -1.03
HLA-DMB-258ENST00000418107 SND1-IT1Q9HBX3 110 aa8.61□□□□□ -1.03
HLA-DMB-258ENST00000418107 PGPEP1Q9NXJ5 209 aa8.61□□□□□ -1.03
HLA-DMB-258ENST00000418107 VPS13BQ7Z7G8 4022 aa8.61□□□□□ -1.03
HLA-DMB-258ENST00000418107 INAFM2P0DMQ5 153 aa8.61□□□□□ -1.03
HLA-DMB-258ENST00000418107 C14orf177Q52M58 125 aa8.61□□□□□ -1.03
HLA-DMB-258ENST00000418107 FUSP35637 526 aaKnown RBP eCLIP8.6□□□□□ -1.03
HLA-DMB-258ENST00000418107 VAMP3Q15836 100 aa8.6□□□□□ -1.03
HLA-DMB-258ENST00000418107 PPDPFQ9H3Y8 114 aa8.6□□□□□ -1.03
HLA-DMB-258ENST00000418107 FABP2P12104 132 aa8.58□□□□□ -1.04
HLA-DMB-258ENST00000418107 RPL13AP40429 203 aaKnown RBP8.58□□□□□ -1.04
HLA-DMB-258ENST00000418107 PSMB2P49721 201 aa8.58□□□□□ -1.04
HLA-DMB-258ENST00000418107 TSPAN13O95857 204 aa8.57□□□□□ -1.04
HLA-DMB-258ENST00000418107 WFDC2Q14508 124 aa8.57□□□□□ -1.04
HLA-DMB-258ENST00000418107 RNF151Q2KHN1 245 aa8.57□□□□□ -1.04
HLA-DMB-258ENST00000418107 GAGE2EQ4V326 116 aa8.57□□□□□ -1.04
HLA-DMB-258ENST00000418107 Q6ZRN7 208 aaPredicted RBP8.57□□□□□ -1.04
HLA-DMB-258ENST00000418107 GAGE2DQ9UEU5 116 aa8.57□□□□□ -1.04
HLA-DMB-258ENST00000418107 TRAV13-2A0A0B4J235 113 aa8.56□□□□□ -1.04
HLA-DMB-258ENST00000418107 LOC107984156A0A0G2JMH3 177 aa8.56□□□□□ -1.04
HLA-DMB-258ENST00000418107 NDUFC2-KCTD14E9PQ53 114 aa8.56□□□□□ -1.04
HLA-DMB-258ENST00000418107 SCGB1C2P0DMR2 95 aa8.56□□□□□ -1.04
HLA-DMB-258ENST00000418107 XGP55808 180 aa8.56□□□□□ -1.04
HLA-DMB-258ENST00000418107 RPL18AQ02543 176 aaKnown RBP8.56□□□□□ -1.04
HLA-DMB-258ENST00000418107 Q5VSD8 79 aa8.56□□□□□ -1.04
HLA-DMB-258ENST00000418107 ARL17AQ8IVW1 177 aa8.56□□□□□ -1.04
HLA-DMB-258ENST00000418107 OR13C6PQ8NH95 151 aa8.56□□□□□ -1.04
HLA-DMB-258ENST00000418107 XAGE1AQ9HD64 81 aa8.56□□□□□ -1.04
HLA-DMB-258ENST00000418107 FLG2Q5D862 2391 aaPredicted RBP8.55□□□□□ -1.04
HLA-DMB-258ENST00000418107 A0A1W2PPM0 123 aa8.55□□□□□ -1.04
HLA-DMB-258ENST00000418107 SLPIP03973 132 aa8.55□□□□□ -1.04
HLA-DMB-258ENST00000418107 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.54□□□□□ -1.04
HLA-DMB-258ENST00000418107 LYRM7Q5U5X0 104 aa8.54□□□□□ -1.04
HLA-DMB-258ENST00000418107 NDUFC2O95298 119 aa8.53□□□□□ -1.04
HLA-DMB-258ENST00000418107 IGKV2-28A0A075B6P5 120 aa8.52□□□□□ -1.05
HLA-DMB-258ENST00000418107 LOC107984640A0A0U1RRK4 108 aa8.52□□□□□ -1.05
HLA-DMB-258ENST00000418107 GAGE10A6NGK3 116 aa8.52□□□□□ -1.05
HLA-DMB-258ENST00000418107 IGKV2D-28P01615 120 aa8.52□□□□□ -1.05
HLA-DMB-258ENST00000418107 GTF2H5Q6ZYL4 71 aa8.52□□□□□ -1.05
HLA-DMB-258ENST00000418107 LRCOL1A6NCL2 159 aa8.51□□□□□ -1.05
HLA-DMB-258ENST00000418107 NCR3O14931 201 aa8.51□□□□□ -1.05
HLA-DMB-258ENST00000418107 KRTAP10-1P60331 282 aa8.51□□□□□ -1.05
HLA-DMB-258ENST00000418107 PRR3P79522 188 aaKnown RBP8.51□□□□□ -1.05
HLA-DMB-258ENST00000418107 GAGE2BQ13066 116 aa8.51□□□□□ -1.05
HLA-DMB-258ENST00000418107 Q6ZRP5 223 aa8.51□□□□□ -1.05
HLA-DMB-258ENST00000418107 LINC00337Q8N6G1 96 aa8.51□□□□□ -1.05
HLA-DMB-258ENST00000418107 SPCS1Q9Y6A9 102 aa8.51□□□□□ -1.05
HLA-DMB-258ENST00000418107 COX6CP09669 75 aa8.5□□□□□ -1.05
HLA-DMB-258ENST00000418107 TLX1NBP0CAT3 122 aa8.5□□□□□ -1.05
HLA-DMB-258ENST00000418107 CNBPP62633 177 aaKnown RBP8.5□□□□□ -1.05
HLA-DMB-258ENST00000418107 S100A7L2Q5SY68 101 aa8.5□□□□□ -1.05
HLA-DMB-258ENST00000418107 SRRM2Q9UQ35 2752 aaKnown RBP8.5□□□□□ -1.05
HLA-DMB-258ENST00000418107 SMR3BP02814 79 aaPredicted RBP8.49□□□□□ -1.05
HLA-DMB-258ENST00000418107 DNAH8Q96JB1 4490 aa8.49□□□□□ -1.05
HLA-DMB-258ENST00000418107 A0A087WTM6 91 aa8.48□□□□□ -1.05
HLA-DMB-258ENST00000418107 K7EP34 96 aa8.48□□□□□ -1.05
HLA-DMB-258ENST00000418107 TRIAP1O43715 76 aa8.48□□□□□ -1.05
HLA-DMB-258ENST00000418107 NKAPP1Q8N9T2 125 aa8.48□□□□□ -1.05
HLA-DMB-258ENST00000418107 PKIGQ9Y2B9 76 aa8.48□□□□□ -1.05
HLA-DMB-258ENST00000418107 HAMPP81172 84 aa8.47□□□□□ -1.05
HLA-DMB-258ENST00000418107 UBE2V1Q13404 147 aa8.47□□□□□ -1.05
HLA-DMB-258ENST00000418107 Q8N814 137 aa8.47□□□□□ -1.05
HLA-DMB-258ENST00000418107 TMEM126AQ9H061 195 aa8.47□□□□□ -1.05
HLA-DMB-258ENST00000418107 TRBV10-2A0A0K0K1G8 114 aa8.46□□□□□ -1.06
HLA-DMB-258ENST00000418107 C9orf129Q5T035 196 aaKnown RBP8.46□□□□□ -1.06
HLA-DMB-258ENST00000418107 Q8NDZ9 215 aa8.46□□□□□ -1.06
HLA-DMB-258ENST00000418107 TRBV20-1A0A075B6N2 111 aa8.45□□□□□ -1.06
HLA-DMB-258ENST00000418107 IGKV2-24A0A0C4DH68 120 aa8.45□□□□□ -1.06
HLA-DMB-258ENST00000418107 M0R378 163 aa8.45□□□□□ -1.06
HLA-DMB-258ENST00000418107 VPREB1P12018 145 aa8.45□□□□□ -1.06
HLA-DMB-258ENST00000418107 SMIM11BQ8TCY0 68 aa8.45□□□□□ -1.06
HLA-DMB-258ENST00000418107 FAM229AH3BQW9 127 aa8.44□□□□□ -1.06
HLA-DMB-258ENST00000418107 RPL28P46779 137 aaKnown RBP8.44□□□□□ -1.06
HLA-DMB-258ENST00000418107 TCL1BO95988 128 aa8.43□□□□□ -1.06
HLA-DMB-258ENST00000418107 ATXN8Q156A1 80 aa8.43□□□□□ -1.06
HLA-DMB-258ENST00000418107 C9orf163Q8N9P6 203 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms