RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 NDUFA1O15239 70 aa10.46□□□□□ -0.73
SHMT2-202ENST00000414700 TRACP01848 142 aa10.46□□□□□ -0.73
SHMT2-202ENST00000414700 RPS28P62857 69 aaKnown RBP10.46□□□□□ -0.73
SHMT2-202ENST00000414700 REG3AQ06141 175 aa10.46□□□□□ -0.73
SHMT2-202ENST00000414700 HIST1H4AP62805 103 aaKnown RBP10.46□□□□□ -0.74
SHMT2-202ENST00000414700 GAGE2AQ6NT46 116 aa10.46□□□□□ -0.74
SHMT2-202ENST00000414700 ENHOQ6UWT2 76 aa10.46□□□□□ -0.74
SHMT2-202ENST00000414700 FAM19A5Q7Z5A7 132 aaPredicted RBP10.46□□□□□ -0.74
SHMT2-202ENST00000414700 C2orf48Q96LS8 159 aa10.46□□□□□ -0.74
SHMT2-202ENST00000414700 ATOX1O00244 68 aa10.45□□□□□ -0.74
SHMT2-202ENST00000414700 COX6A2Q02221 97 aa10.45□□□□□ -0.74
SHMT2-202ENST00000414700 IGLV10-54A0A075B6I4 117 aa10.45□□□□□ -0.74
SHMT2-202ENST00000414700 LINC00959A0A1B0GUT2 108 aa10.45□□□□□ -0.74
SHMT2-202ENST00000414700 CIRBPQ14011 172 aaKnown RBP10.45□□□□□ -0.74
SHMT2-202ENST00000414700 LINC00242Q5T6M2 205 aa10.45□□□□□ -0.74
SHMT2-202ENST00000414700 PRR34Q9NV39 138 aa10.45□□□□□ -0.74
SHMT2-202ENST00000414700 INAFM2P0DMQ5 153 aa10.44□□□□□ -0.74
SHMT2-202ENST00000414700 OR13C6PQ8NH95 151 aa10.43□□□□□ -0.74
SHMT2-202ENST00000414700 LINC00308Q8TCZ7 52 aa10.43□□□□□ -0.74
SHMT2-202ENST00000414700 COPS9Q8WXC6 57 aa10.43□□□□□ -0.74
SHMT2-202ENST00000414700 KRTAP1-5Q9BYS1 174 aa10.43□□□□□ -0.74
SHMT2-202ENST00000414700 BAALC-AS2P0C853 105 aa10.43□□□□□ -0.74
SHMT2-202ENST00000414700 C3orf84H3BNL1 204 aa10.42□□□□□ -0.74
SHMT2-202ENST00000414700 XCL1P47992 114 aa10.41□□□□□ -0.74
SHMT2-202ENST00000414700 CDKN2A-AS1Q9UH64 79 aa10.41□□□□□ -0.74
SHMT2-202ENST00000414700 IGLV5-45A0A087WSX0 123 aa10.4□□□□□ -0.74
SHMT2-202ENST00000414700 CRPP02741 224 aa10.4□□□□□ -0.74
SHMT2-202ENST00000414700 FAM19A3Q7Z5A8 133 aa10.4□□□□□ -0.74
SHMT2-202ENST00000414700 C22orf24Q9Y442 160 aa10.4□□□□□ -0.74
SHMT2-202ENST00000414700 ALMS1Q8TCU4 4167 aa10.4□□□□□ -0.74
SHMT2-202ENST00000414700 Q9HAA7 133 aa10.4□□□□□ -0.75
SHMT2-202ENST00000414700 CHCHD10Q8WYQ3 142 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-202ENST00000414700 HYDINQ4G0P3 5121 aa10.39□□□□□ -0.75
SHMT2-202ENST00000414700 SS18Q15532 418 aa10.38□□□□□ -0.75
SHMT2-202ENST00000414700 IGHV3OR16-9A0A0B4J2B5 98 aa10.38□□□□□ -0.75
SHMT2-202ENST00000414700 hADV29S1A0JD25 119 aa10.38□□□□□ -0.75
SHMT2-202ENST00000414700 IBA57-AS1B1ANH7 110 aa10.38□□□□□ -0.75
SHMT2-202ENST00000414700 TMEM258P61165 79 aa10.38□□□□□ -0.75
SHMT2-202ENST00000414700 RPL18AQ02543 176 aaKnown RBP10.38□□□□□ -0.75
SHMT2-202ENST00000414700 DNAH2Q9P225 4427 aa10.37□□□□□ -0.75
SHMT2-202ENST00000414700 IGLV5-39A0A0G2JS06 123 aa10.36□□□□□ -0.75
SHMT2-202ENST00000414700 LY6G6CO95867 125 aa10.36□□□□□ -0.75
SHMT2-202ENST00000414700 SOSTDC1Q6X4U4 206 aa10.36□□□□□ -0.75
SHMT2-202ENST00000414700 LINC00476Q8WZB0 136 aa10.36□□□□□ -0.75
SHMT2-202ENST00000414700 MALP21145 153 aa10.35□□□□□ -0.75
SHMT2-202ENST00000414700 KRTAP26-1Q6PEX3 210 aa10.35□□□□□ -0.75
SHMT2-202ENST00000414700 FAM218AQ96MZ4 157 aa10.35□□□□□ -0.75
SHMT2-202ENST00000414700 DNAH6Q9C0G6 4158 aa10.35□□□□□ -0.75
SHMT2-202ENST00000414700 IGKV2D-24A0A075B6R9 120 aa10.34□□□□□ -0.75
SHMT2-202ENST00000414700 NBDYA0A0U1RRE5 68 aa10.34□□□□□ -0.75
SHMT2-202ENST00000414700 M0R2N4 97 aa10.34□□□□□ -0.75
SHMT2-202ENST00000414700 Q6JHZ5 121 aa10.34□□□□□ -0.75
SHMT2-202ENST00000414700 CD164L2Q6UWJ8 174 aa10.34□□□□□ -0.75
SHMT2-202ENST00000414700 SACSQ9NZJ4 4579 aa10.34□□□□□ -0.75
SHMT2-202ENST00000414700 SERP2Q8N6R1 65 aa10.33□□□□□ -0.76
SHMT2-202ENST00000414700 C1orf43Q9BWL3 253 aa10.33□□□□□ -0.76
SHMT2-202ENST00000414700 DNAL4O96015 105 aa10.33□□□□□ -0.76
SHMT2-202ENST00000414700 DPH3Q96FX2 82 aa10.33□□□□□ -0.76
SHMT2-202ENST00000414700 CYSTM1Q9H1C7 97 aa10.33□□□□□ -0.76
SHMT2-202ENST00000414700 A0A087WZ39 114 aa10.32□□□□□ -0.76
SHMT2-202ENST00000414700 SMIM1B2RUZ4 78 aa10.32□□□□□ -0.76
SHMT2-202ENST00000414700 ZNF625Q96I27 306 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-202ENST00000414700 A0A0U1RRA0 63 aa10.31□□□□□ -0.76
SHMT2-202ENST00000414700 RPL28P46779 137 aaKnown RBP10.3□□□□□ -0.76
SHMT2-202ENST00000414700 TRAV13-2A0A0B4J235 113 aa10.29□□□□□ -0.76
SHMT2-202ENST00000414700 KMT2CQ8NEZ4 4911 aaKnown RBP10.29□□□□□ -0.76
SHMT2-202ENST00000414700 OBSCN-AS1Q96MR7 158 aa10.28□□□□□ -0.76
SHMT2-202ENST00000414700 IGKV3D-7A0A0C4DH55 119 aa10.27□□□□□ -0.77
SHMT2-202ENST00000414700 Q6ZR54 194 aa10.27□□□□□ -0.77
SHMT2-202ENST00000414700 FRAS1Q86XX4 4008 aa10.27□□□□□ -0.77
SHMT2-202ENST00000414700 USP17L23D6RBM5 183 aa10.26□□□□□ -0.77
SHMT2-202ENST00000414700 C14orf132Q9NPU4 83 aa10.26□□□□□ -0.77
SHMT2-202ENST00000414700 TOMM7Q9P0U1 55 aa10.26□□□□□ -0.77
SHMT2-202ENST00000414700 OXTP01178 125 aa10.25□□□□□ -0.77
SHMT2-202ENST00000414700 C15orf56Q8N910 161 aa10.24□□□□□ -0.77
SHMT2-202ENST00000414700 DSCR8Q96T75 97 aa10.24□□□□□ -0.77
SHMT2-202ENST00000414700 LINC00846Q9NV44 126 aa10.24□□□□□ -0.77
SHMT2-202ENST00000414700 LECT2O14960 151 aa10.24□□□□□ -0.77
SHMT2-202ENST00000414700 Q6ZRN7 208 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-202ENST00000414700 LINC01561Q8N1V8 128 aa10.24□□□□□ -0.77
SHMT2-202ENST00000414700 RMI2Q96E14 147 aa10.24□□□□□ -0.77
SHMT2-202ENST00000414700 A0A087WVE0 104 aa10.23□□□□□ -0.77
SHMT2-202ENST00000414700 A0A087WYN8 130 aa10.23□□□□□ -0.77
SHMT2-202ENST00000414700 KIAA0087Q14695 138 aa10.23□□□□□ -0.77
SHMT2-202ENST00000414700 HIGD2BQ4VC39 106 aa10.23□□□□□ -0.77
SHMT2-202ENST00000414700 COX7B2Q8TF08 81 aa10.23□□□□□ -0.77
SHMT2-202ENST00000414700 H0YGX0 51 aa10.22□□□□□ -0.77
SHMT2-202ENST00000414700 C9orf129Q5T035 196 aaKnown RBP10.22□□□□□ -0.77
SHMT2-202ENST00000414700 C6orf223Q8N319 242 aa10.22□□□□□ -0.77
SHMT2-202ENST00000414700 Q5XG85 94 aa10.21□□□□□ -0.77
SHMT2-202ENST00000414700 LINC00337Q8N6G1 96 aa10.21□□□□□ -0.77
SHMT2-202ENST00000414700 NDUFC2-KCTD14E9PQ53 114 aa10.21□□□□□ -0.78
SHMT2-202ENST00000414700 PSCAO43653 123 aa10.21□□□□□ -0.78
SHMT2-202ENST00000414700 DNAH17Q9UFH2 4485 aa10.21□□□□□ -0.78
SHMT2-202ENST00000414700 IGKV2-28A0A075B6P5 120 aa10.19□□□□□ -0.78
SHMT2-202ENST00000414700 IGKV2D-28P01615 120 aa10.19□□□□□ -0.78
SHMT2-202ENST00000414700 SPAG11BQ08648 103 aa10.19□□□□□ -0.78
SHMT2-202ENST00000414700 C4orf26Q17RF5 130 aa10.19□□□□□ -0.78
SHMT2-202ENST00000414700 C6orf226Q5I0X4 101 aa10.19□□□□□ -0.78
SHMT2-202ENST00000414700 Q8IZM0 81 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms