RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 GAGE6Q13070 117 aa8.45□□□□□ -1.06
CHRNA1-205ENST00000409542 MRPL23Q16540 153 aaKnown RBP8.45□□□□□ -1.06
CHRNA1-205ENST00000409542 Q1RN00 199 aa8.45□□□□□ -1.06
CHRNA1-205ENST00000409542 KRTAP29-1A8MX34 341 aaPredicted RBP8.44□□□□□ -1.06
CHRNA1-205ENST00000409542 ATXN8Q156A1 80 aa8.44□□□□□ -1.06
CHRNA1-205ENST00000409542 FAT3Q8TDW7 4589 aa8.43□□□□□ -1.06
CHRNA1-205ENST00000409542 LINC00308Q8TCZ7 52 aa8.43□□□□□ -1.06
CHRNA1-205ENST00000409542 LINC01600Q96MT4 127 aa8.43□□□□□ -1.06
CHRNA1-205ENST00000409542 CHCHD5Q9BSY4 110 aa8.43□□□□□ -1.06
CHRNA1-205ENST00000409542 H7C2G1 150 aa8.42□□□□□ -1.06
CHRNA1-205ENST00000409542 TRIAP1O43715 76 aa8.42□□□□□ -1.06
CHRNA1-205ENST00000409542 FOXI1Q12951 378 aa8.42□□□□□ -1.06
CHRNA1-205ENST00000409542 TEN1Q86WV5 123 aa8.42□□□□□ -1.06
CHRNA1-205ENST00000409542 IGLV4-60A0A075B6I1 120 aa8.41□□□□□ -1.06
CHRNA1-205ENST00000409542 GYPEP15421 78 aa8.41□□□□□ -1.06
CHRNA1-205ENST00000409542 PPDPFLQ8WWR9 84 aa8.41□□□□□ -1.06
CHRNA1-205ENST00000409542 COX6CP09669 75 aa8.4□□□□□ -1.06
CHRNA1-205ENST00000409542 NPC2P61916 151 aa8.4□□□□□ -1.06
CHRNA1-205ENST00000409542 COX7B2Q8TF08 81 aa8.4□□□□□ -1.06
CHRNA1-205ENST00000409542 A0A1B0GUV1 79 aa8.39□□□□□ -1.07
CHRNA1-205ENST00000409542 SLC25A20O43772 301 aa8.39□□□□□ -1.07
CHRNA1-205ENST00000409542 RPL13AP40429 203 aaKnown RBP8.39□□□□□ -1.07
CHRNA1-205ENST00000409542 LINC01620Q4KN68 170 aa8.39□□□□□ -1.07
CHRNA1-205ENST00000409542 C4orf48Q5BLP8 95 aa8.39□□□□□ -1.07
CHRNA1-205ENST00000409542 MEIG1Q5JSS6 88 aa8.39□□□□□ -1.07
CHRNA1-205ENST00000409542 Q8N814 137 aa8.39□□□□□ -1.07
CHRNA1-205ENST00000409542 DAND5Q8N907 189 aa8.39□□□□□ -1.07
CHRNA1-205ENST00000409542 A0A087WZ39 114 aa8.38□□□□□ -1.07
CHRNA1-205ENST00000409542 IGHV3OR16-9A0A0B4J2B5 98 aa8.38□□□□□ -1.07
CHRNA1-205ENST00000409542 GAGE12HA6NDE8 117 aa8.38□□□□□ -1.07
CHRNA1-205ENST00000409542 C9JAW5 83 aa8.38□□□□□ -1.07
CHRNA1-205ENST00000409542 NTN5Q8WTR8 489 aaPredicted RBP8.38□□□□□ -1.07
CHRNA1-205ENST00000409542 PSCAO43653 123 aa8.38□□□□□ -1.07
CHRNA1-205ENST00000409542 SOSTDC1Q6X4U4 206 aa8.38□□□□□ -1.07
CHRNA1-205ENST00000409542 LINC00528Q8N1L1 170 aa8.38□□□□□ -1.07
CHRNA1-205ENST00000409542 LINC01561Q8N1V8 128 aa8.38□□□□□ -1.07
CHRNA1-205ENST00000409542 ANKRD29Q8N6D5 301 aa8.38□□□□□ -1.07
CHRNA1-205ENST00000409542 CARD19Q96LW7 228 aa8.38□□□□□ -1.07
CHRNA1-205ENST00000409542 TRBV10-2A0A0K0K1G8 114 aa8.37□□□□□ -1.07
CHRNA1-205ENST00000409542 LINC00959A0A1B0GUT2 108 aa8.37□□□□□ -1.07
CHRNA1-205ENST00000409542 PLA2G1BP04054 148 aaKnown RBP8.37□□□□□ -1.07
CHRNA1-205ENST00000409542 IBA57-AS1B1ANH7 110 aa8.36□□□□□ -1.07
CHRNA1-205ENST00000409542 C21orf62-AS1Q17RA5 79 aa8.36□□□□□ -1.07
CHRNA1-205ENST00000409542 Q6ZSA8 131 aa8.36□□□□□ -1.07
CHRNA1-205ENST00000409542 SIGMAR1Q99720 223 aa8.36□□□□□ -1.07
CHRNA1-205ENST00000409542 Q9HAA7 133 aa8.36□□□□□ -1.07
CHRNA1-205ENST00000409542 LST1O00453 97 aa8.35□□□□□ -1.07
CHRNA1-205ENST00000409542 KRTAP10-4P60372 401 aaPredicted RBP8.35□□□□□ -1.07
CHRNA1-205ENST00000409542 SERTAD4-AS1Q5TG53 156 aa8.35□□□□□ -1.07
CHRNA1-205ENST00000409542 PKHD1L1Q86WI1 4243 aa8.35□□□□□ -1.07
CHRNA1-205ENST00000409542 IGKV3OR2-268A0A0C4DH90 116 aa8.34□□□□□ -1.07
CHRNA1-205ENST00000409542 H3BT86 120 aa8.34□□□□□ -1.07
CHRNA1-205ENST00000409542 SCGB1A1P11684 91 aa8.34□□□□□ -1.07
CHRNA1-205ENST00000409542 SS18Q15532 418 aa8.34□□□□□ -1.07
CHRNA1-205ENST00000409542 A0A0U1RRA0 63 aa8.33□□□□□ -1.08
CHRNA1-205ENST00000409542 LINC01556Q5JQF7 62 aa8.33□□□□□ -1.08
CHRNA1-205ENST00000409542 TMEM262E9PQX1 116 aa8.32□□□□□ -1.08
CHRNA1-205ENST00000409542 TOMM7Q9P0U1 55 aa8.32□□□□□ -1.08
CHRNA1-205ENST00000409542 TRAV13-2A0A0B4J235 113 aa8.32□□□□□ -1.08
CHRNA1-205ENST00000409542 COX7A2LO14548 114 aa8.32□□□□□ -1.08
CHRNA1-205ENST00000409542 LECT2O14960 151 aa8.32□□□□□ -1.08
CHRNA1-205ENST00000409542 C5orf38Q86SI9 138 aa8.32□□□□□ -1.08
CHRNA1-205ENST00000409542 Q8N3U1 123 aa8.32□□□□□ -1.08
CHRNA1-205ENST00000409542 C2orf82Q6UX34 121 aa8.31□□□□□ -1.08
CHRNA1-205ENST00000409542 Q8IZM0 81 aa8.31□□□□□ -1.08
CHRNA1-205ENST00000409542 MIR7-3HGQ8N6C7 128 aa8.31□□□□□ -1.08
CHRNA1-205ENST00000409542 CLEC2BQ92478 149 aa8.31□□□□□ -1.08
CHRNA1-205ENST00000409542 CDIP1Q9H305 208 aa8.31□□□□□ -1.08
CHRNA1-205ENST00000409542 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.3□□□□□ -1.08
CHRNA1-205ENST00000409542 SCXQ7RTU7 201 aa8.3□□□□□ -1.08
CHRNA1-205ENST00000409542 PLA2G2DQ9UNK4 145 aa8.3□□□□□ -1.08
CHRNA1-205ENST00000409542 LINC00158P58513 81 aa8.29□□□□□ -1.08
CHRNA1-205ENST00000409542 UBE2WQ96B02 151 aa8.29□□□□□ -1.08
CHRNA1-205ENST00000409542 CRPP02741 224 aa8.28□□□□□ -1.08
CHRNA1-205ENST00000409542 XCL1P47992 114 aa8.28□□□□□ -1.08
CHRNA1-205ENST00000409542 CD164L2Q6UWJ8 174 aa8.28□□□□□ -1.08
CHRNA1-205ENST00000409542 SND1-IT1Q9HBX3 110 aa8.28□□□□□ -1.08
CHRNA1-205ENST00000409542 TRACP01848 142 aa8.27□□□□□ -1.09
CHRNA1-205ENST00000409542 RPL28P46779 137 aaKnown RBP8.27□□□□□ -1.09
CHRNA1-205ENST00000409542 C6orf226Q5I0X4 101 aa8.27□□□□□ -1.09
CHRNA1-205ENST00000409542 IGKV2-28A0A075B6P5 120 aa8.26□□□□□ -1.09
CHRNA1-205ENST00000409542 OXTP01178 125 aa8.26□□□□□ -1.09
CHRNA1-205ENST00000409542 IGKV2D-28P01615 120 aa8.26□□□□□ -1.09
CHRNA1-205ENST00000409542 CXCL5P42830 114 aa8.26□□□□□ -1.09
CHRNA1-205ENST00000409542 LELP1Q5T871 98 aa8.26□□□□□ -1.09
CHRNA1-205ENST00000409542 LINC00269Q8N2A0 174 aa8.26□□□□□ -1.09
CHRNA1-205ENST00000409542 LINC00337Q8N6G1 96 aa8.26□□□□□ -1.09
CHRNA1-205ENST00000409542 CIRBP-AS1Q8TBR5 109 aa8.26□□□□□ -1.09
CHRNA1-205ENST00000409542 CHCHD10Q8WYQ3 142 aaPredicted RBP8.26□□□□□ -1.09
CHRNA1-205ENST00000409542 REG3AQ06141 175 aa8.25□□□□□ -1.09
CHRNA1-205ENST00000409542 CLPSL2Q6UWE3 100 aa8.25□□□□□ -1.09
CHRNA1-205ENST00000409542 TEX49A0A1B0GTD5 131 aa8.24□□□□□ -1.09
CHRNA1-205ENST00000409542 ANGP03950 147 aaKnown RBP8.24□□□□□ -1.09
CHRNA1-205ENST00000409542 KIAA0087Q14695 138 aa8.24□□□□□ -1.09
CHRNA1-205ENST00000409542 PFN2P35080 140 aa8.23□□□□□ -1.09
CHRNA1-205ENST00000409542 TRAV8-4A0A0B4J246 113 aa8.22□□□□□ -1.09
CHRNA1-205ENST00000409542 CKS1BP61024 79 aa8.22□□□□□ -1.09
CHRNA1-205ENST00000409542 COX17Q14061 63 aa8.22□□□□□ -1.09
CHRNA1-205ENST00000409542 CFAP161Q6P656 301 aa8.22□□□□□ -1.09
CHRNA1-205ENST00000409542 FAM240AA0A1B0GVK7 77 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms