RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 DEFB130BP0DP73 79 aa9.79□□□□□ -0.84
DUSP28-202ENST00000405954 DEFB130AP0DP74 79 aa9.79□□□□□ -0.84
DUSP28-202ENST00000405954 TRBV7-4A0A0J9YYF1 115 aa9.78□□□□□ -0.84
DUSP28-202ENST00000405954 PRR15Q8IV56 129 aa9.78□□□□□ -0.84
DUSP28-202ENST00000405954 ACANP16112 2415 aa9.78□□□□□ -0.84
DUSP28-202ENST00000405954 SLURP1P55000 103 aa9.77□□□□□ -0.84
DUSP28-202ENST00000405954 LINC00575Q6W349 94 aa9.77□□□□□ -0.85
DUSP28-202ENST00000405954 SPATA3Q8NHX4 192 aa9.77□□□□□ -0.85
DUSP28-202ENST00000405954 A8MUN3 132 aa9.77□□□□□ -0.85
DUSP28-202ENST00000405954 LMO4P61968 165 aa9.77□□□□□ -0.85
DUSP28-202ENST00000405954 LINC01006Q8NI28 216 aa9.77□□□□□ -0.85
DUSP28-202ENST00000405954 DOPEY1Q5JWR5 2465 aa9.77□□□□□ -0.85
DUSP28-202ENST00000405954 DIRC1Q969H9 104 aa9.76□□□□□ -0.85
DUSP28-202ENST00000405954 IGHV4-61A0A0C4DH41 118 aa9.76□□□□□ -0.85
DUSP28-202ENST00000405954 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.76□□□□□ -0.85
DUSP28-202ENST00000405954 NBEAL2Q6ZNJ1 2754 aa9.75□□□□□ -0.85
DUSP28-202ENST00000405954 UBE2BP63146 152 aa9.75□□□□□ -0.85
DUSP28-202ENST00000405954 A6NED7 52 aa9.74□□□□□ -0.85
DUSP28-202ENST00000405954 IGHV3OR16-9A0A0B4J2B5 98 aa9.74□□□□□ -0.85
DUSP28-202ENST00000405954 C1orf64Q8NEQ6 169 aa9.73□□□□□ -0.85
DUSP28-202ENST00000405954 LINC00959A0A1B0GUT2 108 aa9.72□□□□□ -0.85
DUSP28-202ENST00000405954 ANGP03950 147 aaKnown RBP9.72□□□□□ -0.85
DUSP28-202ENST00000405954 F8P00451 2351 aa9.72□□□□□ -0.85
DUSP28-202ENST00000405954 XAGE1AQ9HD64 81 aa9.72□□□□□ -0.85
DUSP28-202ENST00000405954 TRAV22A0A0B4J277 110 aa9.71□□□□□ -0.85
DUSP28-202ENST00000405954 NBPF19A0A087WUL8 3843 aa9.71□□□□□ -0.86
DUSP28-202ENST00000405954 LOC110117498A0A087WWA1 95 aa9.71□□□□□ -0.86
DUSP28-202ENST00000405954 CD164L2Q6UWJ8 174 aa9.71□□□□□ -0.86
DUSP28-202ENST00000405954 PRR15LQ9BU68 103 aa9.7□□□□□ -0.86
DUSP28-202ENST00000405954 TRBV6-8A0A0A6YYG3 113 aa9.7□□□□□ -0.86
DUSP28-202ENST00000405954 IGHV4-59P01825 116 aa9.7□□□□□ -0.86
DUSP28-202ENST00000405954 C6orf223Q8N319 242 aa9.7□□□□□ -0.86
DUSP28-202ENST00000405954 MAP6D1Q9H9H5 199 aa9.7□□□□□ -0.86
DUSP28-202ENST00000405954 SMIM29Q86T20 159 aa9.69□□□□□ -0.86
DUSP28-202ENST00000405954 COX7BP24311 80 aa9.69□□□□□ -0.86
DUSP28-202ENST00000405954 CR1P17927 2039 aa9.69□□□□□ -0.86
DUSP28-202ENST00000405954 IGHV4-30-2A0A087WSY4 118 aa9.69□□□□□ -0.86
DUSP28-202ENST00000405954 FBXL19-AS1Q494R0 122 aa9.69□□□□□ -0.86
DUSP28-202ENST00000405954 A0A096LNT2 108 aa9.68□□□□□ -0.86
DUSP28-202ENST00000405954 C1orf158Q8N1D5 194 aa9.68□□□□□ -0.86
DUSP28-202ENST00000405954 LY6G6DO95868 133 aa9.68□□□□□ -0.86
DUSP28-202ENST00000405954 IGLV1-40P01703 118 aa9.68□□□□□ -0.86
DUSP28-202ENST00000405954 Q6ZRU5 148 aa9.68□□□□□ -0.86
DUSP28-202ENST00000405954 KLK12Q9UKR0 248 aa9.68□□□□□ -0.86
DUSP28-202ENST00000405954 UBE2AP49459 152 aa9.68□□□□□ -0.86
DUSP28-202ENST00000405954 A6NDX4 124 aa9.66□□□□□ -0.86
DUSP28-202ENST00000405954 LYRM9A8MSI8 78 aa9.66□□□□□ -0.86
DUSP28-202ENST00000405954 KLK9Q2XQG4 91 aa9.66□□□□□ -0.86
DUSP28-202ENST00000405954 LINC01356Q8N9X3 169 aa9.66□□□□□ -0.86
DUSP28-202ENST00000405954 RBM12B-AS1Q9P1G2 102 aa9.66□□□□□ -0.86
DUSP28-202ENST00000405954 SETXQ7Z333 2677 aaKnown RBP9.66□□□□□ -0.86
DUSP28-202ENST00000405954 Q6ZRP5 223 aa9.66□□□□□ -0.86
DUSP28-202ENST00000405954 Q8IZM0 81 aa9.66□□□□□ -0.86
DUSP28-202ENST00000405954 GCN1Q92616 2671 aaKnown RBP9.66□□□□□ -0.86
DUSP28-202ENST00000405954 hDV103S1A0JD37 113 aa9.66□□□□□ -0.86
DUSP28-202ENST00000405954 C18orf65Q6ZTR6 163 aa9.65□□□□□ -0.86
DUSP28-202ENST00000405954 GYPEP15421 78 aa9.65□□□□□ -0.87
DUSP28-202ENST00000405954 MP68P56378 58 aa9.65□□□□□ -0.87
DUSP28-202ENST00000405954 H3BQ85 93 aa9.64□□□□□ -0.87
DUSP28-202ENST00000405954 ERC2-IT1O76042 136 aa9.64□□□□□ -0.87
DUSP28-202ENST00000405954 SPAG11BQ08648 103 aa9.64□□□□□ -0.87
DUSP28-202ENST00000405954 Q6ZTC4 211 aa9.63□□□□□ -0.87
DUSP28-202ENST00000405954 LINC00167Q96N53 147 aa9.63□□□□□ -0.87
DUSP28-202ENST00000405954 KTN1-AS1Q86SY8 53 aa9.62□□□□□ -0.87
DUSP28-202ENST00000405954 CCL19Q99731 98 aa9.62□□□□□ -0.87
DUSP28-202ENST00000405954 ESM1Q9NQ30 184 aa9.62□□□□□ -0.87
DUSP28-202ENST00000405954 ITPR2Q14571 2701 aa9.62□□□□□ -0.87
DUSP28-202ENST00000405954 UNQ6190/PRO20217Q6UXQ8 127 aa9.62□□□□□ -0.87
DUSP28-202ENST00000405954 FLNAP21333 2647 aaKnown RBP9.62□□□□□ -0.87
DUSP28-202ENST00000405954 HCG22E2RYF7 251 aa9.62□□□□□ -0.87
DUSP28-202ENST00000405954 C4orf48Q5BLP8 95 aa9.62□□□□□ -0.87
DUSP28-202ENST00000405954 CHCHD10Q8WYQ3 142 aaPredicted RBP9.61□□□□□ -0.87
DUSP28-202ENST00000405954 ZNF73O43830 326 aaPredicted RBP9.61□□□□□ -0.87
DUSP28-202ENST00000405954 HTN3P15516 51 aa9.61□□□□□ -0.87
DUSP28-202ENST00000405954 DEFB112Q30KQ8 113 aa9.6□□□□□ -0.87
DUSP28-202ENST00000405954 PLA2G2AP14555 144 aa9.6□□□□□ -0.87
DUSP28-202ENST00000405954 C10orf25Q5T742 122 aa9.59□□□□□ -0.87
DUSP28-202ENST00000405954 DEFB116Q30KQ4 102 aa9.59□□□□□ -0.87
DUSP28-202ENST00000405954 OCR1Q9BZK8 76 aa9.59□□□□□ -0.87
DUSP28-202ENST00000405954 IGKV4-1P06312 121 aa9.59□□□□□ -0.87
DUSP28-202ENST00000405954 APOC4P55056 127 aa9.59□□□□□ -0.87
DUSP28-202ENST00000405954 SYCNQ0VAF6 134 aa9.59□□□□□ -0.87
DUSP28-202ENST00000405954 Q1T7F1 81 aa9.59□□□□□ -0.87
DUSP28-202ENST00000405954 WFDC13Q8IUB5 93 aa9.58□□□□□ -0.88
DUSP28-202ENST00000405954 A8MU10 97 aa9.58□□□□□ -0.88
DUSP28-202ENST00000405954 LINC00208Q96KT6 92 aa9.58□□□□□ -0.88
DUSP28-202ENST00000405954 COX17Q14061 63 aa9.57□□□□□ -0.88
DUSP28-202ENST00000405954 ETDCA0A1B0GVM5 59 aa9.57□□□□□ -0.88
DUSP28-202ENST00000405954 MSMBP08118 114 aa9.57□□□□□ -0.88
DUSP28-202ENST00000405954 ITPR3Q14573 2671 aa9.57□□□□□ -0.88
DUSP28-202ENST00000405954 DNAJC9-AS1A6NH13 148 aa9.57□□□□□ -0.88
DUSP28-202ENST00000405954 TENM4Q6N022 2769 aa9.56□□□□□ -0.88
DUSP28-202ENST00000405954 WFDC10BQ8IUB3 73 aa9.56□□□□□ -0.88
DUSP28-202ENST00000405954 HIVEP2P31629 2446 aa9.56□□□□□ -0.88
DUSP28-202ENST00000405954 APCP25054 2843 aa9.55□□□□□ -0.88
DUSP28-202ENST00000405954 NDUFB1O75438 58 aa9.55□□□□□ -0.88
DUSP28-202ENST00000405954 C9orf66Q5T8R8 295 aa9.55□□□□□ -0.88
DUSP28-202ENST00000405954 C16orf74Q96GX8 76 aa9.55□□□□□ -0.88
DUSP28-202ENST00000405954 NDUFS5O43920 106 aa9.54□□□□□ -0.88
DUSP28-202ENST00000405954 REG3AQ06141 175 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms