RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 PKD1L1Q8TDX9 2849 aa6.54□□□□□ -1.36
SMC1B-202ENST00000404354 HIVEP1P15822 2718 aa6.54□□□□□ -1.36
SMC1B-202ENST00000404354 TRAV25A0A0B4J276 109 aa6.54□□□□□ -1.36
SMC1B-202ENST00000404354 REG3AQ06141 175 aa6.54□□□□□ -1.36
SMC1B-202ENST00000404354 Q5XG85 94 aa6.54□□□□□ -1.36
SMC1B-202ENST00000404354 FASNP49327 2511 aaKnown RBP6.54□□□□□ -1.36
SMC1B-202ENST00000404354 C19orf73Q9NVV2 129 aa6.54□□□□□ -1.36
SMC1B-202ENST00000404354 LINC01547P58512 204 aaPredicted RBP6.53□□□□□ -1.36
SMC1B-202ENST00000404354 KIAA0087Q14695 138 aa6.53□□□□□ -1.36
SMC1B-202ENST00000404354 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.53□□□□□ -1.36
SMC1B-202ENST00000404354 FAM236DA0A1B0GTK5 79 aa6.52□□□□□ -1.36
SMC1B-202ENST00000404354 FAM236CP0DP71 79 aa6.52□□□□□ -1.36
SMC1B-202ENST00000404354 DEFB135Q30KP9 77 aa6.52□□□□□ -1.36
SMC1B-202ENST00000404354 DEFB113Q30KQ7 82 aa6.52□□□□□ -1.37
SMC1B-202ENST00000404354 LINC00575Q6W349 94 aa6.52□□□□□ -1.37
SMC1B-202ENST00000404354 Q6ZVQ6 151 aa6.52□□□□□ -1.37
SMC1B-202ENST00000404354 KLK12Q9UKR0 248 aa6.52□□□□□ -1.37
SMC1B-202ENST00000404354 SPAG11BQ08648 103 aa6.51□□□□□ -1.37
SMC1B-202ENST00000404354 Q6ZQT0 140 aa6.51□□□□□ -1.37
SMC1B-202ENST00000404354 CYSRT1A8MQ03 144 aa6.51□□□□□ -1.37
SMC1B-202ENST00000404354 F8WEM9 126 aa6.51□□□□□ -1.37
SMC1B-202ENST00000404354 TRBV10-3A0A0K0K1G6 114 aa6.51□□□□□ -1.37
SMC1B-202ENST00000404354 DAD1P61803 113 aa6.51□□□□□ -1.37
SMC1B-202ENST00000404354 TM2D3Q9BRN9 247 aa6.51□□□□□ -1.37
SMC1B-202ENST00000404354 TENM1Q9UKZ4 2725 aa6.5□□□□□ -1.37
SMC1B-202ENST00000404354 IGLV1-51P01701 117 aa6.5□□□□□ -1.37
SMC1B-202ENST00000404354 CD164L2Q6UWJ8 174 aa6.5□□□□□ -1.37
SMC1B-202ENST00000404354 PRO0255Q9UI72 69 aa6.5□□□□□ -1.37
SMC1B-202ENST00000404354 HIGD2BQ4VC39 106 aa6.5□□□□□ -1.37
SMC1B-202ENST00000404354 H7BZZ5 65 aa6.49□□□□□ -1.37
SMC1B-202ENST00000404354 LINC00474Q9P2X8 69 aa6.49□□□□□ -1.37
SMC1B-202ENST00000404354 HECTD1Q9ULT8 2610 aa6.49□□□□□ -1.37
SMC1B-202ENST00000404354 HELZ2Q9BYK8 2649 aaKnown RBP6.48□□□□□ -1.37
SMC1B-202ENST00000404354 NDUFC2O95298 119 aa6.48□□□□□ -1.37
SMC1B-202ENST00000404354 DEFB105AQ8NG35 78 aa6.48□□□□□ -1.37
SMC1B-202ENST00000404354 LINC00167Q96N53 147 aa6.48□□□□□ -1.37
SMC1B-202ENST00000404354 BAHCC1Q9P281 2608 aa6.48□□□□□ -1.37
SMC1B-202ENST00000404354 ZNF561-AS1K7EIQ3 104 aa6.48□□□□□ -1.37
SMC1B-202ENST00000404354 LINC00336Q6ZUF6 198 aa6.48□□□□□ -1.37
SMC1B-202ENST00000404354 A0A1B0GUV1 79 aa6.47□□□□□ -1.37
SMC1B-202ENST00000404354 ATP5EP2Q5VTU8 51 aa6.47□□□□□ -1.37
SMC1B-202ENST00000404354 LYPD5Q6UWN5 251 aa6.47□□□□□ -1.37
SMC1B-202ENST00000404354 IGHV4-28A0A0C4DH34 117 aa6.46□□□□□ -1.37
SMC1B-202ENST00000404354 X6R8D5 127 aa6.46□□□□□ -1.37
SMC1B-202ENST00000404354 TRRAPQ9Y4A5 3859 aa6.46□□□□□ -1.37
SMC1B-202ENST00000404354 C3orf84H3BNL1 204 aa6.46□□□□□ -1.38
SMC1B-202ENST00000404354 MPLKIPQ8TAP9 179 aa6.46□□□□□ -1.38
SMC1B-202ENST00000404354 MUC7Q8TAX7 377 aa6.46□□□□□ -1.38
SMC1B-202ENST00000404354 SMR3AQ99954 134 aa6.46□□□□□ -1.38
SMC1B-202ENST00000404354 CELA1Q9UNI1 258 aa6.46□□□□□ -1.38
SMC1B-202ENST00000404354 PKIGQ9Y2B9 76 aa6.46□□□□□ -1.38
SMC1B-202ENST00000404354 TRAV7A0A075B6U4 112 aa6.45□□□□□ -1.38
SMC1B-202ENST00000404354 C1orf43Q9BWL3 253 aa6.45□□□□□ -1.38
SMC1B-202ENST00000404354 BPY2O14599 106 aa6.44□□□□□ -1.38
SMC1B-202ENST00000404354 PRB2P02812 416 aaPredicted RBP6.44□□□□□ -1.38
SMC1B-202ENST00000404354 LRCOL1A6NCL2 159 aa6.44□□□□□ -1.38
SMC1B-202ENST00000404354 A0A0U1RQV1 116 aa6.44□□□□□ -1.38
SMC1B-202ENST00000404354 DIRC1Q969H9 104 aa6.44□□□□□ -1.38
SMC1B-202ENST00000404354 COX17Q14061 63 aa6.43□□□□□ -1.38
SMC1B-202ENST00000404354 KRTAP1-3Q8IUG1 177 aa6.43□□□□□ -1.38
SMC1B-202ENST00000404354 C6orf48Q9UBA6 75 aa6.43□□□□□ -1.38
SMC1B-202ENST00000404354 ZNF73O43830 326 aaPredicted RBP6.43□□□□□ -1.38
SMC1B-202ENST00000404354 CMC4P56277 68 aaPredicted RBP6.43□□□□□ -1.38
SMC1B-202ENST00000404354 KMT2BQ9UMN6 2715 aaPredicted RBP6.41□□□□□ -1.38
SMC1B-202ENST00000404354 COX7BP24311 80 aa6.41□□□□□ -1.38
SMC1B-202ENST00000404354 FP248Q71RG6 208 aaPredicted RBP6.41□□□□□ -1.38
SMC1B-202ENST00000404354 IGLV6-57P01721 117 aa6.41□□□□□ -1.38
SMC1B-202ENST00000404354 NREPQ16612 68 aa6.41□□□□□ -1.38
SMC1B-202ENST00000404354 SERP1Q9Y6X1 66 aa6.41□□□□□ -1.38
SMC1B-202ENST00000404354 KRTAP10-3P60369 221 aa6.4□□□□□ -1.38
SMC1B-202ENST00000404354 LOC110117498A0A087WWA1 95 aa6.4□□□□□ -1.38
SMC1B-202ENST00000404354 BRK1Q8WUW1 75 aa6.4□□□□□ -1.38
SMC1B-202ENST00000404354 CAMK2N2Q96S95 79 aa6.4□□□□□ -1.38
SMC1B-202ENST00000404354 TRBV7-6A0A0J9YX20 115 aa6.4□□□□□ -1.39
SMC1B-202ENST00000404354 MIFP14174 115 aa6.4□□□□□ -1.39
SMC1B-202ENST00000404354 FAM229BQ4G0N7 80 aa6.39□□□□□ -1.39
SMC1B-202ENST00000404354 NDUFC2-KCTD14E9PQ53 114 aa6.39□□□□□ -1.39
SMC1B-202ENST00000404354 KLKP1Q107X0 134 aa6.38□□□□□ -1.39
SMC1B-202ENST00000404354 TMEM254Q8TBM7 123 aa6.38□□□□□ -1.39
SMC1B-202ENST00000404354 OTOGQ6ZRI0 2925 aa6.38□□□□□ -1.39
SMC1B-202ENST00000404354 MRAPQ8TCY5 172 aa6.38□□□□□ -1.39
SMC1B-202ENST00000404354 PRR4Q16378 134 aa6.37□□□□□ -1.39
SMC1B-202ENST00000404354 WFDC10BQ8IUB3 73 aa6.37□□□□□ -1.39
SMC1B-202ENST00000404354 HIGD2AQ9BW72 106 aa6.37□□□□□ -1.39
SMC1B-202ENST00000404354 NOTCH1P46531 2555 aa6.37□□□□□ -1.39
SMC1B-202ENST00000404354 LINC00612Q8N6U2 182 aa6.37□□□□□ -1.39
SMC1B-202ENST00000404354 FAM30AQ9NZY2 134 aa6.37□□□□□ -1.39
SMC1B-202ENST00000404354 MAST4O15021 2626 aa6.37□□□□□ -1.39
SMC1B-202ENST00000404354 ANK3Q12955 4377 aaKnown RBP6.37□□□□□ -1.39
SMC1B-202ENST00000404354 Q6ZRU5 148 aa6.37□□□□□ -1.39
SMC1B-202ENST00000404354 TENM3Q9P273 2699 aa6.36□□□□□ -1.39
SMC1B-202ENST00000404354 FLNBO75369 2602 aaKnown RBP6.36□□□□□ -1.39
SMC1B-202ENST00000404354 TRBV7-4A0A0J9YYF1 115 aa6.36□□□□□ -1.39
SMC1B-202ENST00000404354 A0A0J9YWU9 116 aa6.36□□□□□ -1.39
SMC1B-202ENST00000404354 RPL37AP8A6NKH3 93 aa6.36□□□□□ -1.39
SMC1B-202ENST00000404354 IGHV4-30-4P0DP06 118 aa6.36□□□□□ -1.39
SMC1B-202ENST00000404354 CXCL6P80162 114 aa6.36□□□□□ -1.39
SMC1B-202ENST00000404354 SMIM26A0A096LP01 95 aa6.35□□□□□ -1.39
SMC1B-202ENST00000404354 A0A0G2JQZ4 141 aa6.35□□□□□ -1.39
SMC1B-202ENST00000404354 A0A1W2PNN7 141 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms