RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 LINC01549A6NIU2 74 aa5.11□□□□□ -1.59
NUP43-204ENST00000403890 C9JQL5 133 aa5.11□□□□□ -1.59
NUP43-204ENST00000403890 RAB5BP61020 215 aa5.11□□□□□ -1.59
NUP43-204ENST00000403890 PDZD11Q5EBL8 140 aa5.11□□□□□ -1.59
NUP43-204ENST00000403890 ZC2HC1BQ5TFG8 222 aa5.11□□□□□ -1.59
NUP43-204ENST00000403890 PLEKHB2Q96CS7 222 aa5.11□□□□□ -1.59
NUP43-204ENST00000403890 CDKN2A-AS1Q9UH64 79 aa5.11□□□□□ -1.59
NUP43-204ENST00000403890 IGLV8-61A0A075B6I0 122 aa5.1□□□□□ -1.59
NUP43-204ENST00000403890 IGIPA6NJ69 53 aa5.1□□□□□ -1.59
NUP43-204ENST00000403890 SPINK1P00995 79 aa5.1□□□□□ -1.59
NUP43-204ENST00000403890 PNRC1Q12796 327 aaPredicted RBP5.1□□□□□ -1.59
NUP43-204ENST00000403890 COX7B2Q8TF08 81 aa5.1□□□□□ -1.59
NUP43-204ENST00000403890 SCGB3A1Q96QR1 104 aa5.1□□□□□ -1.59
NUP43-204ENST00000403890 TIMM17AQ99595 171 aa5.1□□□□□ -1.59
NUP43-204ENST00000403890 PRLHP81277 87 aa5.09□□□□□ -1.59
NUP43-204ENST00000403890 ERASQ7Z444 233 aa5.09□□□□□ -1.59
NUP43-204ENST00000403890 TINCRA0A1B0GVN0 87 aa5.08□□□□□ -1.6
NUP43-204ENST00000403890 H3BRM9 83 aa5.08□□□□□ -1.6
NUP43-204ENST00000403890 ATP5LO75964 103 aa5.08□□□□□ -1.6
NUP43-204ENST00000403890 RPL24P83731 157 aaKnown RBP5.08□□□□□ -1.6
NUP43-204ENST00000403890 PCOTHQ58A44 107 aa5.08□□□□□ -1.6
NUP43-204ENST00000403890 Q8NBF4 154 aa5.08□□□□□ -1.6
NUP43-204ENST00000403890 TOMM6Q96B49 74 aa5.08□□□□□ -1.6
NUP43-204ENST00000403890 FCGBPQ9Y6R7 5405 aaPredicted RBP5.07□□□□□ -1.6
NUP43-204ENST00000403890 SYNE2Q8WXH0 6885 aaKnown RBP5.07□□□□□ -1.6
NUP43-204ENST00000403890 IGKV2-28A0A075B6P5 120 aa5.07□□□□□ -1.6
NUP43-204ENST00000403890 IGKV2D-28P01615 120 aa5.07□□□□□ -1.6
NUP43-204ENST00000403890 FAM19A1Q7Z5A9 133 aa5.07□□□□□ -1.6
NUP43-204ENST00000403890 GNB1LQ9BYB4 327 aa5.07□□□□□ -1.6
NUP43-204ENST00000403890 MACF1Q9UPN3 7388 aaKnown RBP5.06□□□□□ -1.6
NUP43-204ENST00000403890 SSPOA2VEC9 5147 aa5.06□□□□□ -1.6
NUP43-204ENST00000403890 IGLV5-37A0A075B6J1 123 aa5.06□□□□□ -1.6
NUP43-204ENST00000403890 RAB14P61106 215 aa5.06□□□□□ -1.6
NUP43-204ENST00000403890 FAM19A2Q8N3H0 131 aa5.06□□□□□ -1.6
NUP43-204ENST00000403890 SMIM1B2RUZ4 78 aa5.05□□□□□ -1.6
NUP43-204ENST00000403890 PFN2P35080 140 aa5.05□□□□□ -1.6
NUP43-204ENST00000403890 COX6B2Q6YFQ2 88 aa5.05□□□□□ -1.6
NUP43-204ENST00000403890 CBLN2Q8IUK8 224 aa5.05□□□□□ -1.6
NUP43-204ENST00000403890 SPINK8P0C7L1 97 aa5.04□□□□□ -1.6
NUP43-204ENST00000403890 PMVKQ15126 192 aa5.04□□□□□ -1.6
NUP43-204ENST00000403890 KIAA1644Q3SXP7 199 aa5.04□□□□□ -1.6
NUP43-204ENST00000403890 Q8N377 158 aa5.04□□□□□ -1.6
NUP43-204ENST00000403890 SPRR4Q96PI1 79 aa5.04□□□□□ -1.6
NUP43-204ENST00000403890 TMEM126AQ9H061 195 aa5.04□□□□□ -1.6
NUP43-204ENST00000403890 CST9LQ9H4G1 147 aa5.04□□□□□ -1.6
NUP43-204ENST00000403890 SMCO4Q9NRQ5 59 aa5.04□□□□□ -1.6
NUP43-204ENST00000403890 KRTAP4-16G5E9R7 235 aaPredicted RBP5.03□□□□□ -1.6
NUP43-204ENST00000403890 SLC25A20O43772 301 aa5.03□□□□□ -1.6
NUP43-204ENST00000403890 NDUFA6P56556 154 aa5.03□□□□□ -1.6
NUP43-204ENST00000403890 RPS29P62273 56 aaKnown RBP5.03□□□□□ -1.6
NUP43-204ENST00000403890 COX17Q14061 63 aa5.03□□□□□ -1.6
NUP43-204ENST00000403890 FA2HQ7L5A8 372 aa5.03□□□□□ -1.6
NUP43-204ENST00000403890 HIGD2AQ9BW72 106 aa5.03□□□□□ -1.6
NUP43-204ENST00000403890 USH2AO75445 5202 aa5.02□□□□□ -1.61
NUP43-204ENST00000403890 IGLV5-45A0A087WSX0 123 aa5.02□□□□□ -1.61
NUP43-204ENST00000403890 TMEM238C9JI98 176 aa5.02□□□□□ -1.61
NUP43-204ENST00000403890 SCO1O75880 301 aa5.02□□□□□ -1.61
NUP43-204ENST00000403890 S100PP25815 95 aa5.02□□□□□ -1.61
NUP43-204ENST00000403890 SFTA2Q6UW10 78 aa5.02□□□□□ -1.61
NUP43-204ENST00000403890 FLGP20930 4061 aaPredicted RBP5.01□□□□□ -1.61
NUP43-204ENST00000403890 TRAV9-1A0A075B6T8 112 aa5.01□□□□□ -1.61
NUP43-204ENST00000403890 M0R378 163 aa5.01□□□□□ -1.61
NUP43-204ENST00000403890 ATP6V1G1O75348 118 aa5.01□□□□□ -1.61
NUP43-204ENST00000403890 CFC1P0CG37 223 aa5.01□□□□□ -1.61
NUP43-204ENST00000403890 ADCYAP1P18509 176 aa5.01□□□□□ -1.61
NUP43-204ENST00000403890 COX19Q49B96 90 aa5.01□□□□□ -1.61
NUP43-204ENST00000403890 ZNF706Q9Y5V0 76 aaPredicted RBP5.01□□□□□ -1.61
NUP43-204ENST00000403890 S100A12P80511 92 aa5□□□□□ -1.61
NUP43-204ENST00000403890 SND1-IT1Q9HBX3 110 aa5□□□□□ -1.61
NUP43-204ENST00000403890 ERG28Q9UKR5 140 aa5□□□□□ -1.61
NUP43-204ENST00000403890 LINC00158P58513 81 aa4.99□□□□□ -1.61
NUP43-204ENST00000403890 FABP9Q0Z7S8 132 aa4.99□□□□□ -1.61
NUP43-204ENST00000403890 VPREB1P12018 145 aa4.98□□□□□ -1.61
NUP43-204ENST00000403890 ZNF625Q96I27 306 aaPredicted RBP4.98□□□□□ -1.61
NUP43-204ENST00000403890 LINC01546A6NGU7 62 aa4.97□□□□□ -1.61
NUP43-204ENST00000403890 IGLC3P0DOY3 106 aa4.97□□□□□ -1.61
NUP43-204ENST00000403890 TMEM170BQ5T4T1 132 aa4.97□□□□□ -1.61
NUP43-204ENST00000403890 IGLV5-39A0A0G2JS06 123 aa4.96□□□□□ -1.62
NUP43-204ENST00000403890 LINC00587B1AMM8 73 aa4.96□□□□□ -1.62
NUP43-204ENST00000403890 SSBP3-AS1Q7Z2R9 100 aa4.96□□□□□ -1.62
NUP43-204ENST00000403890 BAGE3Q86Y29 109 aa4.96□□□□□ -1.62
NUP43-204ENST00000403890 LINC00614P0C842 121 aa4.95□□□□□ -1.62
NUP43-204ENST00000403890 A0A0U1RRA0 63 aa4.94□□□□□ -1.62
NUP43-204ENST00000403890 ETDCA0A1B0GVM5 59 aa4.94□□□□□ -1.62
NUP43-204ENST00000403890 ZNF22P17026 224 aaPredicted RBP4.94□□□□□ -1.62
NUP43-204ENST00000403890 MOBPQ13875 183 aa4.94□□□□□ -1.62
NUP43-204ENST00000403890 UQCC3Q6UW78 93 aa4.94□□□□□ -1.62
NUP43-204ENST00000403890 SMCR5Q8TEV8 140 aa4.94□□□□□ -1.62
NUP43-204ENST00000403890 SEC11CQ9BY50 192 aa4.94□□□□□ -1.62
NUP43-204ENST00000403890 IGLV9-49A0A0B4J1Y8 123 aa4.93□□□□□ -1.62
NUP43-204ENST00000403890 TMEM218A2RU14 115 aa4.93□□□□□ -1.62
NUP43-204ENST00000403890 C9orf92A6NGG3 77 aa4.93□□□□□ -1.62
NUP43-204ENST00000403890 PRYO14603 147 aa4.93□□□□□ -1.62
NUP43-204ENST00000403890 HBDP02042 147 aa4.93□□□□□ -1.62
NUP43-204ENST00000403890 LINC00483Q53H64 154 aa4.93□□□□□ -1.62
NUP43-204ENST00000403890 MEIG1Q5JSS6 88 aa4.93□□□□□ -1.62
NUP43-204ENST00000403890 CLLU1Q5K131 121 aa4.92□□□□□ -1.62
NUP43-204ENST00000403890 BOD1L2Q8IYS8 172 aa4.92□□□□□ -1.62
NUP43-204ENST00000403890 MAP1LC3CQ9BXW4 147 aa4.92□□□□□ -1.62
NUP43-204ENST00000403890 CHTOPQ9Y3Y2 248 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms