RNA–Protein interactions for RNA: ENST00000400564.5

SAMSN1-202, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 1 (best) BASIC

Gene SAMSN1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-202ENST00000400564 TMEM131LA2VDJ0 1609 aa0.58□□□□□ -2.32
SAMSN1-202ENST00000400564 KIAA0556O60303 1618 aa0.58□□□□□ -2.32
SAMSN1-202ENST00000400564 PPRC1Q5VV67 1664 aaKnown RBP0.58□□□□□ -2.32
SAMSN1-202ENST00000400564 MYMXA0A1B0GTQ4 84 aa0.57□□□□□ -2.32
SAMSN1-202ENST00000400564 SPRR1BP22528 89 aa0.57□□□□□ -2.32
SAMSN1-202ENST00000400564 LINC00643Q86TS7 51 aa0.57□□□□□ -2.32
SAMSN1-202ENST00000400564 FXYD6Q9H0Q3 95 aa0.57□□□□□ -2.32
SAMSN1-202ENST00000400564 SYNE2Q8WXH0 6885 aaKnown RBP0.57□□□□□ -2.32
SAMSN1-202ENST00000400564 PKDREJQ9NTG1 2253 aa0.57□□□□□ -2.32
SAMSN1-202ENST00000400564 SYNE1Q8NF91 8797 aaKnown RBP0.57□□□□□ -2.32
SAMSN1-202ENST00000400564 U3KQA8 63 aa0.57□□□□□ -2.32
SAMSN1-202ENST00000400564 NAV2Q8IVL1 2488 aa0.56□□□□□ -2.32
SAMSN1-202ENST00000400564 KIF20BQ96Q89 1820 aa0.56□□□□□ -2.32
SAMSN1-202ENST00000400564 MAGI2Q86UL8 1455 aa0.56□□□□□ -2.32
SAMSN1-202ENST00000400564 VWFP04275 2813 aa0.56□□□□□ -2.32
SAMSN1-202ENST00000400564 MAP3K4Q9Y6R4 1608 aa0.56□□□□□ -2.32
SAMSN1-202ENST00000400564 LRP1Q07954 4544 aaKnown RBP0.56□□□□□ -2.32
SAMSN1-202ENST00000400564 PRKDCP78527 4128 aaKnown RBP0.56□□□□□ -2.32
SAMSN1-202ENST00000400564 A0A1B0GUT8 65 aa0.56□□□□□ -2.32
SAMSN1-202ENST00000400564 DIP2BQ9P265 1576 aa0.56□□□□□ -2.32
SAMSN1-202ENST00000400564 FSIP2Q5CZC0 6907 aa0.55□□□□□ -2.32
SAMSN1-202ENST00000400564 ALKQ9UM73 1620 aa0.55□□□□□ -2.32
SAMSN1-202ENST00000400564 CHD6Q8TD26 2715 aa0.55□□□□□ -2.32
SAMSN1-202ENST00000400564 TSC2P49815 1807 aa0.55□□□□□ -2.32
SAMSN1-202ENST00000400564 SUPT6HQ7KZ85 1726 aaKnown RBP0.55□□□□□ -2.32
SAMSN1-202ENST00000400564 ZFYVE26Q68DK2 2539 aa0.55□□□□□ -2.32
SAMSN1-202ENST00000400564 KANTRA0A1W2PQU2 76 aa0.55□□□□□ -2.32
SAMSN1-202ENST00000400564 I3L3M4 83 aa0.55□□□□□ -2.32
SAMSN1-202ENST00000400564 ACYP1P07311 99 aa0.55□□□□□ -2.32
SAMSN1-202ENST00000400564 S100A13Q99584 98 aa0.55□□□□□ -2.32
SAMSN1-202ENST00000400564 ERVK-7P63135 1459 aa0.55□□□□□ -2.32
SAMSN1-202ENST00000400564 LRRC37AA6NMS7 1700 aa0.54□□□□□ -2.32
SAMSN1-202ENST00000400564 RGPD1P0DJD0 1748 aa0.54□□□□□ -2.32
SAMSN1-202ENST00000400564 KMT2DO14686 5537 aa0.54□□□□□ -2.32
SAMSN1-202ENST00000400564 SPTY2D1-AS1A0A0U1RR47 76 aa0.54□□□□□ -2.32
SAMSN1-202ENST00000400564 CEBPZOSA8MTT3 80 aa0.54□□□□□ -2.32
SAMSN1-202ENST00000400564 ST20Q9HBF5 79 aa0.54□□□□□ -2.32
SAMSN1-202ENST00000400564 MDN1Q9NU22 5596 aa0.54□□□□□ -2.32
SAMSN1-202ENST00000400564 PKD1L3Q7Z443 1732 aa0.53□□□□□ -2.32
SAMSN1-202ENST00000400564 FMN2Q9NZ56 1722 aa0.53□□□□□ -2.32
SAMSN1-202ENST00000400564 CPSF4LA6NMK7 179 aaKnown RBP0.53□□□□□ -2.32
SAMSN1-202ENST00000400564 ADIRFQ15847 76 aa0.53□□□□□ -2.32
SAMSN1-202ENST00000400564 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.53□□□□□ -2.33
SAMSN1-202ENST00000400564 NCOR1O75376 2440 aa0.53□□□□□ -2.33
SAMSN1-202ENST00000400564 UBR4Q5T4S7 5183 aa0.53□□□□□ -2.33
SAMSN1-202ENST00000400564 HUWE1Q7Z6Z7 4374 aaKnown RBP0.52□□□□□ -2.33
SAMSN1-202ENST00000400564 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.52□□□□□ -2.332e-7■■■■□ 26.3
SAMSN1-202ENST00000400564 ATP7BP35670 1465 aa0.52□□□□□ -2.33
SAMSN1-202ENST00000400564 CELSR1Q9NYQ6 3014 aa0.52□□□□□ -2.33
SAMSN1-202ENST00000400564 DEFB105AQ8NG35 78 aa0.52□□□□□ -2.33
SAMSN1-202ENST00000400564 APLNQ9ULZ1 77 aa0.52□□□□□ -2.33
SAMSN1-202ENST00000400564 RGPD2P0DJD1 1756 aa0.51□□□□□ -2.33
SAMSN1-202ENST00000400564 CACNA1AO00555 2505 aa0.51□□□□□ -2.33
SAMSN1-202ENST00000400564 ATRQ13535 2644 aa0.5□□□□□ -2.33
SAMSN1-202ENST00000400564 KMT2AQ03164 3969 aa0.5□□□□□ -2.33
SAMSN1-202ENST00000400564 GAFA1Q96PS6 74 aa0.5□□□□□ -2.33
SAMSN1-202ENST00000400564 REV3LO60673 3130 aa0.5□□□□□ -2.33
SAMSN1-202ENST00000400564 UBR3Q6ZT12 1888 aa0.5□□□□□ -2.33
SAMSN1-202ENST00000400564 NKTRP30414 1462 aaKnown RBP0.5□□□□□ -2.33
SAMSN1-202ENST00000400564 LRRC9Q6ZRR7 1453 aa0.5□□□□□ -2.33
SAMSN1-202ENST00000400564 KDM5DQ9BY66 1539 aa0.5□□□□□ -2.33
SAMSN1-202ENST00000400564 COL6A3P12111 3177 aa0.5□□□□□ -2.33
SAMSN1-202ENST00000400564 CNOT1A5YKK6 2376 aaKnown RBP0.49□□□□□ -2.33
SAMSN1-202ENST00000400564 KLK9Q2XQG4 91 aa0.49□□□□□ -2.33
SAMSN1-202ENST00000400564 TENM4Q6N022 2769 aa0.49□□□□□ -2.33
SAMSN1-202ENST00000400564 LRRC7Q96NW7 1537 aa0.49□□□□□ -2.33
SAMSN1-202ENST00000400564 DCAF1Q9Y4B6 1507 aa0.49□□□□□ -2.33
SAMSN1-202ENST00000400564 ZNF831Q5JPB2 1677 aa0.49□□□□□ -2.33
SAMSN1-202ENST00000400564 FAT4Q6V0I7 4981 aa0.48□□□□□ -2.33
SAMSN1-202ENST00000400564 SPINK4O60575 86 aa0.48□□□□□ -2.33
SAMSN1-202ENST00000400564 COX7BP24311 80 aa0.48□□□□□ -2.33
SAMSN1-202ENST00000400564 DEFB121Q5J5C9 76 aa0.48□□□□□ -2.33
SAMSN1-202ENST00000400564 QSER1Q2KHR3 1735 aa0.48□□□□□ -2.33
SAMSN1-202ENST00000400564 COL14A1Q05707 1796 aaKnown RBP0.48□□□□□ -2.33
SAMSN1-202ENST00000400564 PKD1L1Q8TDX9 2849 aa0.48□□□□□ -2.33
SAMSN1-202ENST00000400564 MUC2Q02817 5179 aa0.48□□□□□ -2.33
SAMSN1-202ENST00000400564 BVES-AS1Q5T3Y7 98 aa0.47□□□□□ -2.33
SAMSN1-202ENST00000400564 WFDC9Q8NEX5 89 aa0.47□□□□□ -2.33
SAMSN1-202ENST00000400564 MRPL34Q9BQ48 92 aaKnown RBP0.47□□□□□ -2.33
SAMSN1-202ENST00000400564 CSPG4Q6UVK1 2322 aa0.47□□□□□ -2.33
SAMSN1-202ENST00000400564 TRAV21A0A0B4J279 112 aa0.46□□□□□ -2.34
SAMSN1-202ENST00000400564 UBR5O95071 2799 aaPredicted RBP0.46□□□□□ -2.34
SAMSN1-202ENST00000400564 SPTA1P02549 2419 aa0.46□□□□□ -2.34
SAMSN1-202ENST00000400564 RPL38P63173 70 aaKnown RBP0.45□□□□□ -2.34
SAMSN1-202ENST00000400564 IGSF10Q6WRI0 2623 aa0.45□□□□□ -2.34
SAMSN1-202ENST00000400564 LTN1O94822 1766 aa0.45□□□□□ -2.34
SAMSN1-202ENST00000400564 H3BUT2 72 aa0.45□□□□□ -2.34
SAMSN1-202ENST00000400564 USP32Q8NFA0 1604 aa0.44□□□□□ -2.34
SAMSN1-202ENST00000400564 MAP3K1Q13233 1512 aa0.44□□□□□ -2.34
SAMSN1-202ENST00000400564 CLIP1P30622 1438 aa0.44□□□□□ -2.34
SAMSN1-202ENST00000400564 SCN11AQ9UI33 1791 aa0.44□□□□□ -2.34
SAMSN1-202ENST00000400564 PHGR1C9JFL3 82 aa0.44□□□□□ -2.34
SAMSN1-202ENST00000400564 NDUFB1O75438 58 aa0.44□□□□□ -2.34
SAMSN1-202ENST00000400564 H1FX-AS1Q4G0G2 97 aa0.44□□□□□ -2.34
SAMSN1-202ENST00000400564 HEPN1Q6WQI6 88 aa0.44□□□□□ -2.34
SAMSN1-202ENST00000400564 POLR1AO95602 1720 aaPredicted RBP0.43□□□□□ -2.34
SAMSN1-202ENST00000400564 RRBP1Q9P2E9 1410 aaKnown RBP0.43□□□□□ -2.34
SAMSN1-202ENST00000400564 CFAP74Q9C0B2 1584 aa0.43□□□□□ -2.34
SAMSN1-202ENST00000400564 CEP170BQ9Y4F5 1589 aaPredicted RBP0.43□□□□□ -2.34
SAMSN1-202ENST00000400564 CCL22O00626 93 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms