RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 KRTAP10-11P60412 298 aa8.24□□□□□ -1.09
CACNA1C-213ENST00000399629 SMIM29Q86T20 159 aa8.23□□□□□ -1.09
CACNA1C-213ENST00000399629 SMIM26A0A096LP01 95 aa8.23□□□□□ -1.09
CACNA1C-213ENST00000399629 LINC00304Q8N9R0 145 aa8.23□□□□□ -1.09
CACNA1C-213ENST00000399629 Q9UF83 564 aa8.22□□□□□ -1.09
CACNA1C-213ENST00000399629 LINC00476Q8WZB0 136 aa8.22□□□□□ -1.09
CACNA1C-213ENST00000399629 COL27A1Q8IZC6 1860 aaPredicted RBP8.22□□□□□ -1.09
CACNA1C-213ENST00000399629 CCDC179H3BU77 68 aa8.21□□□□□ -1.09
CACNA1C-213ENST00000399629 DNAH10OSP0CZ25 163 aa8.21□□□□□ -1.09
CACNA1C-213ENST00000399629 GVQW2A0A096LPI5 108 aaPredicted RBP8.21□□□□□ -1.1
CACNA1C-213ENST00000399629 Q6ZRX8 168 aa8.21□□□□□ -1.1
CACNA1C-213ENST00000399629 PLXNB1O43157 2135 aa8.2□□□□□ -1.1
CACNA1C-213ENST00000399629 IGHV3OR16-9A0A0B4J2B5 98 aa8.2□□□□□ -1.1
CACNA1C-213ENST00000399629 IGLV8-61A0A075B6I0 122 aa8.2□□□□□ -1.1
CACNA1C-213ENST00000399629 CXCL6P80162 114 aa8.2□□□□□ -1.1
CACNA1C-213ENST00000399629 ELOF1P60002 83 aaKnown RBP8.2□□□□□ -1.1
CACNA1C-213ENST00000399629 C9orf92A6NGG3 77 aa8.19□□□□□ -1.1
CACNA1C-213ENST00000399629 URB1-AS1Q96HZ7 61 aa8.18□□□□□ -1.1
CACNA1C-213ENST00000399629 ST20-AS1Q8NBB2 130 aa8.18□□□□□ -1.1
CACNA1C-213ENST00000399629 FAM19A4Q96LR4 140 aa8.18□□□□□ -1.1
CACNA1C-213ENST00000399629 TTC28Q96AY4 2481 aa8.18□□□□□ -1.1
CACNA1C-213ENST00000399629 SPAG11AQ6PDA7 123 aa8.17□□□□□ -1.1
CACNA1C-213ENST00000399629 IGLV5-39A0A0G2JS06 123 aa8.17□□□□□ -1.1
CACNA1C-213ENST00000399629 NAV2Q8IVL1 2488 aa8.17□□□□□ -1.1
CACNA1C-213ENST00000399629 C8orf87E5RJ46 101 aa8.17□□□□□ -1.1
CACNA1C-213ENST00000399629 TMEM254Q8TBM7 123 aa8.16□□□□□ -1.1
CACNA1C-213ENST00000399629 TM2D3Q9BRN9 247 aa8.16□□□□□ -1.1
CACNA1C-213ENST00000399629 TRAV22A0A0B4J277 110 aa8.15□□□□□ -1.1
CACNA1C-213ENST00000399629 FAM168BA1KXE4 195 aa8.15□□□□□ -1.1
CACNA1C-213ENST00000399629 RBM12B-AS1Q9P1G2 102 aa8.14□□□□□ -1.11
CACNA1C-213ENST00000399629 ABCA2Q9BZC7 2435 aa8.14□□□□□ -1.11
CACNA1C-213ENST00000399629 LINC00846Q9NV44 126 aa8.14□□□□□ -1.11
CACNA1C-213ENST00000399629 PTPRBP23467 1997 aa8.14□□□□□ -1.11
CACNA1C-213ENST00000399629 LINC00310P59036 64 aa8.13□□□□□ -1.11
CACNA1C-213ENST00000399629 A0A087WTM6 91 aa8.12□□□□□ -1.11
CACNA1C-213ENST00000399629 A0A1B0GW54 56 aa8.1□□□□□ -1.11
CACNA1C-213ENST00000399629 C19orf73Q9NVV2 129 aa8.1□□□□□ -1.11
CACNA1C-213ENST00000399629 ATRXP46100 2492 aa8.1□□□□□ -1.11
CACNA1C-213ENST00000399629 IGLV5-37A0A075B6J1 123 aa8.1□□□□□ -1.11
CACNA1C-213ENST00000399629 LINC00528Q8N1L1 170 aa8.09□□□□□ -1.11
CACNA1C-213ENST00000399629 DSCR10P59022 87 aa8.09□□□□□ -1.11
CACNA1C-213ENST00000399629 SSBP3-AS1Q7Z2R9 100 aa8.08□□□□□ -1.12
CACNA1C-213ENST00000399629 OBSCN-AS1Q96MR7 158 aa8.08□□□□□ -1.12
CACNA1C-213ENST00000399629 A0A096LNJ9 63 aa8.08□□□□□ -1.12
CACNA1C-213ENST00000399629 ZNF861PO60384 105 aa8.07□□□□□ -1.12
CACNA1C-213ENST00000399629 KRTAP10-3P60369 221 aa8.06□□□□□ -1.12
CACNA1C-213ENST00000399629 VPREB1P12018 145 aa8.06□□□□□ -1.12
CACNA1C-213ENST00000399629 CCDC168Q8NDH2 2452 aa8.05□□□□□ -1.12
CACNA1C-213ENST00000399629 H3BPC8 53 aa8.05□□□□□ -1.12
CACNA1C-213ENST00000399629 APLNQ9ULZ1 77 aa8.05□□□□□ -1.12
CACNA1C-213ENST00000399629 MRPL34Q9BQ48 92 aaKnown RBP8.05□□□□□ -1.12
CACNA1C-213ENST00000399629 IGLV5-45A0A087WSX0 123 aa8.04□□□□□ -1.12
CACNA1C-213ENST00000399629 LOC101927531A0A1B0GV80 90 aa8.04□□□□□ -1.12
CACNA1C-213ENST00000399629 MUC4Q99102 2169 aa8.04□□□□□ -1.12
CACNA1C-213ENST00000399629 NCOR2Q9Y618 2525 aa8.04□□□□□ -1.12
CACNA1C-213ENST00000399629 IGLV1-50A0A075B6I6 118 aa8.04□□□□□ -1.12
CACNA1C-213ENST00000399629 LINC01546A6NGU7 62 aa8.04□□□□□ -1.12
CACNA1C-213ENST00000399629 A8MWP4 228 aa8.03□□□□□ -1.12
CACNA1C-213ENST00000399629 M0R2T5 61 aa8.02□□□□□ -1.13
CACNA1C-213ENST00000399629 Q6ZQT0 140 aa8.02□□□□□ -1.13
CACNA1C-213ENST00000399629 PCNTO95613 3336 aa8.01□□□□□ -1.13
CACNA1C-213ENST00000399629 TRBV7-4A0A0J9YYF1 115 aa8.01□□□□□ -1.13
CACNA1C-213ENST00000399629 IGLV7-43P04211 117 aa8.01□□□□□ -1.13
CACNA1C-213ENST00000399629 CACNA1AO00555 2505 aa8.01□□□□□ -1.13
CACNA1C-213ENST00000399629 IGF2RP11717 2491 aa8.01□□□□□ -1.13
CACNA1C-213ENST00000399629 LRRK2Q5S007 2527 aa8□□□□□ -1.13
CACNA1C-213ENST00000399629 LOC110117498A0A087WWA1 95 aa8□□□□□ -1.13
CACNA1C-213ENST00000399629 CSNK1G2-AS1Q8NCQ2 148 aa7.99□□□□□ -1.13
CACNA1C-213ENST00000399629 FAM218AQ96MZ4 157 aa7.99□□□□□ -1.13
CACNA1C-213ENST00000399629 IGLV6-57P01721 117 aa7.98□□□□□ -1.13
CACNA1C-213ENST00000399629 CENPFP49454 3210 aa7.97□□□□□ -1.13
CACNA1C-213ENST00000399629 LINC01554Q52M75 96 aa7.96□□□□□ -1.14
CACNA1C-213ENST00000399629 C15orf56Q8N910 161 aa7.96□□□□□ -1.14
CACNA1C-213ENST00000399629 Q6ZSA8 131 aa7.95□□□□□ -1.14
CACNA1C-213ENST00000399629 ANAPC11Q9NYG5 84 aa7.95□□□□□ -1.14
CACNA1C-213ENST00000399629 K7EQZ3 153 aa7.94□□□□□ -1.14
CACNA1C-213ENST00000399629 C9orf163Q8N9P6 203 aa7.94□□□□□ -1.14
CACNA1C-213ENST00000399629 PCSK5Q92824 1860 aa7.94□□□□□ -1.14
CACNA1C-213ENST00000399629 KCNQ1DNQ9H478 68 aa7.94□□□□□ -1.14
CACNA1C-213ENST00000399629 ZNF575Q86XF7 245 aa7.94□□□□□ -1.14
CACNA1C-213ENST00000399629 CASC10Q5T4H9 136 aa7.93□□□□□ -1.14
CACNA1C-213ENST00000399629 PSORS1C2Q9UIG4 136 aa7.93□□□□□ -1.14
CACNA1C-213ENST00000399629 IGFL1Q6UW32 110 aa7.93□□□□□ -1.14
CACNA1C-213ENST00000399629 C8orf17Q9NRJ1 99 aa7.93□□□□□ -1.14
CACNA1C-213ENST00000399629 LINC01600Q96MT4 127 aa7.92□□□□□ -1.14
CACNA1C-213ENST00000399629 A0A1B0GVX0 72 aa7.91□□□□□ -1.14
CACNA1C-213ENST00000399629 PIEZO2Q9H5I5 2752 aa7.91□□□□□ -1.14
CACNA1C-213ENST00000399629 A0A096LNT2 108 aa7.91□□□□□ -1.14
CACNA1C-213ENST00000399629 PIEZO1Q92508 2521 aa7.9□□□□□ -1.14
CACNA1C-213ENST00000399629 CRIPTQ9P021 101 aa7.9□□□□□ -1.15
CACNA1C-213ENST00000399629 C9orf129Q5T035 196 aaKnown RBP7.89□□□□□ -1.15
CACNA1C-213ENST00000399629 IGLV7-46A0A075B6I9 117 aa7.88□□□□□ -1.15
CACNA1C-213ENST00000399629 TNP2Q05952 138 aa7.88□□□□□ -1.15
CACNA1C-213ENST00000399629 A0A1W2PNN7 141 aa7.87□□□□□ -1.15
CACNA1C-213ENST00000399629 PRR34Q9NV39 138 aa7.87□□□□□ -1.15
CACNA1C-213ENST00000399629 TLX1NBP0CAT3 122 aa7.86□□□□□ -1.15
CACNA1C-213ENST00000399629 PLA2G2DQ9UNK4 145 aa7.86□□□□□ -1.15
CACNA1C-213ENST00000399629 KLK9Q2XQG4 91 aa7.85□□□□□ -1.15
CACNA1C-213ENST00000399629 SPRR4Q96PI1 79 aa7.84□□□□□ -1.15
CACNA1C-213ENST00000399629 KRTAP1-3Q8IUG1 177 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms