RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 SEC61GP60059 68 aa6.31□□□□□ -1.4
CAPN3-206ENST00000397163 C1orf195Q5TG92 126 aa6.31□□□□□ -1.4
CAPN3-206ENST00000397163 FN1P02751 2386 aaKnown RBP6.31□□□□□ -1.4
CAPN3-206ENST00000397163 SMIM26A0A096LP01 95 aa6.3□□□□□ -1.4
CAPN3-206ENST00000397163 DNAJC9-AS1A6NH13 148 aa6.3□□□□□ -1.4
CAPN3-206ENST00000397163 C9orf116Q5BN46 136 aaPredicted RBP6.3□□□□□ -1.4
CAPN3-206ENST00000397163 SPATA3Q8NHX4 192 aa6.3□□□□□ -1.4
CAPN3-206ENST00000397163 TM2D3Q9BRN9 247 aa6.3□□□□□ -1.4
CAPN3-206ENST00000397163 CR1P17927 2039 aa6.3□□□□□ -1.4
CAPN3-206ENST00000397163 IGLV10-54A0A075B6I4 117 aa6.3□□□□□ -1.4
CAPN3-206ENST00000397163 F8WDY8 70 aa6.3□□□□□ -1.4
CAPN3-206ENST00000397163 TEX15Q9BXT5 2789 aa6.29□□□□□ -1.4
CAPN3-206ENST00000397163 EPM2AB3EWF7 344 aa6.29□□□□□ -1.4
CAPN3-206ENST00000397163 LINC00482Q8N8I6 264 aa6.29□□□□□ -1.4
CAPN3-206ENST00000397163 C19orf73Q9NVV2 129 aa6.29□□□□□ -1.4
CAPN3-206ENST00000397163 LAMTOR3Q9UHA4 124 aa6.29□□□□□ -1.4
CAPN3-206ENST00000397163 ITPR3Q14573 2671 aa6.29□□□□□ -1.4
CAPN3-206ENST00000397163 TRAV7A0A075B6U4 112 aa6.29□□□□□ -1.4
CAPN3-206ENST00000397163 A0A1B0GUV1 79 aa6.29□□□□□ -1.4
CAPN3-206ENST00000397163 LINC00269Q8N2A0 174 aa6.29□□□□□ -1.4
CAPN3-206ENST00000397163 PDZD2O15018 2839 aa6.29□□□□□ -1.4
CAPN3-206ENST00000397163 KRTAP1-3Q8IUG1 177 aa6.29□□□□□ -1.4
CAPN3-206ENST00000397163 V9GYY9 64 aa6.29□□□□□ -1.4
CAPN3-206ENST00000397163 LINC01547P58512 204 aaPredicted RBP6.28□□□□□ -1.4
CAPN3-206ENST00000397163 IGLV1-51P01701 117 aa6.28□□□□□ -1.4
CAPN3-206ENST00000397163 COX17Q14061 63 aa6.28□□□□□ -1.4
CAPN3-206ENST00000397163 TRBV10-3A0A0K0K1G6 114 aa6.27□□□□□ -1.41
CAPN3-206ENST00000397163 KIAA0087Q14695 138 aa6.27□□□□□ -1.41
CAPN3-206ENST00000397163 CD164L2Q6UWJ8 174 aa6.27□□□□□ -1.41
CAPN3-206ENST00000397163 LINC00575Q6W349 94 aa6.27□□□□□ -1.41
CAPN3-206ENST00000397163 CHCHD10Q8WYQ3 142 aaPredicted RBP6.27□□□□□ -1.41
CAPN3-206ENST00000397163 ACANP16112 2415 aa6.27□□□□□ -1.41
CAPN3-206ENST00000397163 ANGP03950 147 aaKnown RBP6.27□□□□□ -1.41
CAPN3-206ENST00000397163 KLKP1Q107X0 134 aa6.27□□□□□ -1.41
CAPN3-206ENST00000397163 Q8N3U1 123 aa6.27□□□□□ -1.41
CAPN3-206ENST00000397163 ESM1Q9NQ30 184 aa6.27□□□□□ -1.41
CAPN3-206ENST00000397163 FLNAP21333 2647 aaKnown RBP6.26□□□□□ -1.41
CAPN3-206ENST00000397163 Q8NDZ9 215 aa6.26□□□□□ -1.41
CAPN3-206ENST00000397163 PRO0255Q9UI72 69 aa6.26□□□□□ -1.41
CAPN3-206ENST00000397163 LRCOL1A6NCL2 159 aa6.26□□□□□ -1.41
CAPN3-206ENST00000397163 Q6ZQT0 140 aa6.26□□□□□ -1.41
CAPN3-206ENST00000397163 Q6ZVQ6 151 aa6.26□□□□□ -1.41
CAPN3-206ENST00000397163 ZNF561-AS1K7EIQ3 104 aa6.25□□□□□ -1.41
CAPN3-206ENST00000397163 Q8N9L7 120 aa6.25□□□□□ -1.41
CAPN3-206ENST00000397163 REG3AQ06141 175 aa6.25□□□□□ -1.41
CAPN3-206ENST00000397163 LINC01006Q8NI28 216 aa6.25□□□□□ -1.41
CAPN3-206ENST00000397163 NBEAL2Q6ZNJ1 2754 aa6.24□□□□□ -1.41
CAPN3-206ENST00000397163 IGHV4-28A0A0C4DH34 117 aa6.24□□□□□ -1.41
CAPN3-206ENST00000397163 DAD1P61803 113 aa6.24□□□□□ -1.41
CAPN3-206ENST00000397163 Q6ZQY7 126 aa6.23□□□□□ -1.41
CAPN3-206ENST00000397163 LOC110117498A0A087WWA1 95 aa6.23□□□□□ -1.41
CAPN3-206ENST00000397163 MIFP14174 115 aa6.23□□□□□ -1.41
CAPN3-206ENST00000397163 UNQ6190/PRO20217Q6UXQ8 127 aa6.23□□□□□ -1.41
CAPN3-206ENST00000397163 C6orf223Q8N319 242 aa6.23□□□□□ -1.41
CAPN3-206ENST00000397163 LINC00612Q8N6U2 182 aa6.23□□□□□ -1.41
CAPN3-206ENST00000397163 SPAG11BQ08648 103 aa6.23□□□□□ -1.41
CAPN3-206ENST00000397163 C10orf25Q5T742 122 aa6.23□□□□□ -1.41
CAPN3-206ENST00000397163 HIVEP2P31629 2446 aa6.22□□□□□ -1.41
CAPN3-206ENST00000397163 NF1P21359 2839 aa6.22□□□□□ -1.41
CAPN3-206ENST00000397163 F8P00451 2351 aa6.21□□□□□ -1.41
CAPN3-206ENST00000397163 DEFB4AO15263 64 aa6.21□□□□□ -1.42
CAPN3-206ENST00000397163 NREPQ16612 68 aa6.21□□□□□ -1.42
CAPN3-206ENST00000397163 TEP1Q99973 2627 aaKnown RBP6.21□□□□□ -1.42
CAPN3-206ENST00000397163 PRB2P02812 416 aaPredicted RBP6.21□□□□□ -1.42
CAPN3-206ENST00000397163 TRBV7-4A0A0J9YYF1 115 aa6.2□□□□□ -1.42
CAPN3-206ENST00000397163 CYSRT1A8MQ03 144 aa6.2□□□□□ -1.42
CAPN3-206ENST00000397163 X6R8D5 127 aa6.2□□□□□ -1.42
CAPN3-206ENST00000397163 BCE1O60756 84 aa6.2□□□□□ -1.42
CAPN3-206ENST00000397163 PDE6GP18545 87 aa6.2□□□□□ -1.42
CAPN3-206ENST00000397163 TMEM254Q8TBM7 123 aa6.2□□□□□ -1.42
CAPN3-206ENST00000397163 IGLV6-57P01721 117 aa6.19□□□□□ -1.42
CAPN3-206ENST00000397163 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.19□□□□□ -1.42
CAPN3-206ENST00000397163 OTOGQ6ZRI0 2925 aa6.19□□□□□ -1.42
CAPN3-206ENST00000397163 MUC7Q8TAX7 377 aa6.19□□□□□ -1.42
CAPN3-206ENST00000397163 DIRC1Q969H9 104 aa6.19□□□□□ -1.42
CAPN3-206ENST00000397163 XAGE1AQ9HD64 81 aa6.18□□□□□ -1.42
CAPN3-206ENST00000397163 HIVEP1P15822 2718 aa6.18□□□□□ -1.42
CAPN3-206ENST00000397163 MTORP42345 2549 aa6.18□□□□□ -1.42
CAPN3-206ENST00000397163 CXCL6P80162 114 aa6.18□□□□□ -1.42
CAPN3-206ENST00000397163 BPY2O14599 106 aa6.18□□□□□ -1.42
CAPN3-206ENST00000397163 LYRM9A8MSI8 78 aa6.17□□□□□ -1.42
CAPN3-206ENST00000397163 H3BQ85 93 aa6.17□□□□□ -1.42
CAPN3-206ENST00000397163 KRTAP1-1Q07627 177 aa6.17□□□□□ -1.42
CAPN3-206ENST00000397163 C9orf66Q5T8R8 295 aa6.17□□□□□ -1.42
CAPN3-206ENST00000397163 HIGD2AQ9BW72 106 aa6.17□□□□□ -1.42
CAPN3-206ENST00000397163 A0A0J9YWU9 116 aa6.17□□□□□ -1.42
CAPN3-206ENST00000397163 IGHV4-30-4P0DP06 118 aa6.17□□□□□ -1.42
CAPN3-206ENST00000397163 HTN3P15516 51 aa6.17□□□□□ -1.42
CAPN3-206ENST00000397163 SMR3AQ99954 134 aa6.17□□□□□ -1.42
CAPN3-206ENST00000397163 KLK12Q9UKR0 248 aa6.17□□□□□ -1.42
CAPN3-206ENST00000397163 DEFB135Q30KP9 77 aa6.16□□□□□ -1.42
CAPN3-206ENST00000397163 COX7BP24311 80 aa6.16□□□□□ -1.42
CAPN3-206ENST00000397163 ZNF73O43830 326 aaPredicted RBP6.15□□□□□ -1.42
CAPN3-206ENST00000397163 FUSP35637 526 aaKnown RBP eCLIP6.15□□□□□ -1.42
CAPN3-206ENST00000397163 ESRGQ1W209 222 aa6.15□□□□□ -1.42
CAPN3-206ENST00000397163 PRYO14603 147 aa6.15□□□□□ -1.43
CAPN3-206ENST00000397163 CELA1Q9UNI1 258 aa6.15□□□□□ -1.43
CAPN3-206ENST00000397163 ZNF469Q96JG9 3925 aaPredicted RBP6.15□□□□□ -1.43
CAPN3-206ENST00000397163 PSPHP1O15172 72 aa6.14□□□□□ -1.43
CAPN3-206ENST00000397163 NDUFC1O43677 76 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms