RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 MYO18AQ92614 2054 aaKnown RBP2.1□□□□□ -2.07
HMGB1P10-201ENST00000395823 CACNA1HO95180 2353 aa2.09□□□□□ -2.07
HMGB1P10-201ENST00000395823 MYH4Q9Y623 1939 aa2.09□□□□□ -2.07
HMGB1P10-201ENST00000395823 RGPD2P0DJD1 1756 aa2.09□□□□□ -2.07
HMGB1P10-201ENST00000395823 M0R135 149 aa2.09□□□□□ -2.07
HMGB1P10-201ENST00000395823 NDUFB1O75438 58 aa2.09□□□□□ -2.07
HMGB1P10-201ENST00000395823 PRB1P04280 392 aa2.09□□□□□ -2.07
HMGB1P10-201ENST00000395823 DEFB103AP81534 67 aa2.09□□□□□ -2.07
HMGB1P10-201ENST00000395823 PCOTHQ58A44 107 aa2.09□□□□□ -2.07
HMGB1P10-201ENST00000395823 ZNF563Q8TA94 476 aa2.09□□□□□ -2.07
HMGB1P10-201ENST00000395823 COL11A1P12107 1806 aaPredicted RBP2.09□□□□□ -2.08
HMGB1P10-201ENST00000395823 SPAG17Q6Q759 2223 aa2.09□□□□□ -2.08
HMGB1P10-201ENST00000395823 MRC1P22897 1456 aa2.08□□□□□ -2.08
HMGB1P10-201ENST00000395823 NINQ8N4C6 2090 aa2.08□□□□□ -2.08
HMGB1P10-201ENST00000395823 IGKV3D-7A0A0C4DH55 119 aa2.08□□□□□ -2.08
HMGB1P10-201ENST00000395823 IGKV3OR2-268A0A0C4DH90 116 aa2.08□□□□□ -2.08
HMGB1P10-201ENST00000395823 CTXND1A0A1B0GTU2 59 aa2.08□□□□□ -2.08
HMGB1P10-201ENST00000395823 INE1O15225 51 aa2.08□□□□□ -2.08
HMGB1P10-201ENST00000395823 RNASE3P12724 160 aaKnown RBP2.08□□□□□ -2.08
HMGB1P10-201ENST00000395823 IL9P15248 144 aa2.08□□□□□ -2.08
HMGB1P10-201ENST00000395823 RPL37AP61513 92 aaKnown RBP2.08□□□□□ -2.08
HMGB1P10-201ENST00000395823 COX17Q14061 63 aa2.08□□□□□ -2.08
HMGB1P10-201ENST00000395823 SMIM4Q8WVI0 70 aa2.08□□□□□ -2.08
HMGB1P10-201ENST00000395823 SNURFQ9Y675 71 aa2.08□□□□□ -2.08
HMGB1P10-201ENST00000395823 NOTCH1P46531 2555 aa2.08□□□□□ -2.08
HMGB1P10-201ENST00000395823 C5P01031 1676 aa2.08□□□□□ -2.08
HMGB1P10-201ENST00000395823 LMO7Q8WWI1 1683 aa2.08□□□□□ -2.08
HMGB1P10-201ENST00000395823 FN1P02751 2386 aaKnown RBP2.08□□□□□ -2.08
HMGB1P10-201ENST00000395823 NUMA1Q14980 2115 aa2.08□□□□□ -2.08
HMGB1P10-201ENST00000395823 FBN1P35555 2871 aaKnown RBP2.08□□□□□ -2.08
HMGB1P10-201ENST00000395823 COL12A1Q99715 3063 aa2.07□□□□□ -2.08
HMGB1P10-201ENST00000395823 E9PCH4 1651 aa2.07□□□□□ -2.08
HMGB1P10-201ENST00000395823 LOC110117498A0A087WWA1 95 aa2.07□□□□□ -2.08
HMGB1P10-201ENST00000395823 FXYD6-FXYD2A0A087WZ82 144 aa2.07□□□□□ -2.08
HMGB1P10-201ENST00000395823 A0A1B0GUT8 65 aa2.07□□□□□ -2.08
HMGB1P10-201ENST00000395823 C10orf142B7Z368 130 aa2.07□□□□□ -2.08
HMGB1P10-201ENST00000395823 M0R2N4 97 aa2.07□□□□□ -2.08
HMGB1P10-201ENST00000395823 HMGA1P17096 107 aaKnown RBP2.07□□□□□ -2.08
HMGB1P10-201ENST00000395823 WFDC6Q9BQY6 131 aa2.07□□□□□ -2.08
HMGB1P10-201ENST00000395823 FXYD6Q9H0Q3 95 aa2.07□□□□□ -2.08
HMGB1P10-201ENST00000395823 C4AP0C0L4 1744 aa2.07□□□□□ -2.08
HMGB1P10-201ENST00000395823 ITPR1Q14643 2758 aa2.07□□□□□ -2.08
HMGB1P10-201ENST00000395823 CCDC168Q8NDH2 2452 aa2.07□□□□□ -2.08
HMGB1P10-201ENST00000395823 A0A0G2JMZ2 1700 aa2.06□□□□□ -2.08
HMGB1P10-201ENST00000395823 LY75O60449 1722 aa2.06□□□□□ -2.08
HMGB1P10-201ENST00000395823 DSPP15924 2871 aaKnown RBP2.06□□□□□ -2.08
HMGB1P10-201ENST00000395823 AFDNP55196 1824 aaKnown RBP2.06□□□□□ -2.08
HMGB1P10-201ENST00000395823 M0R3E3 92 aa2.06□□□□□ -2.08
HMGB1P10-201ENST00000395823 KRTAP5-9P26371 169 aa2.06□□□□□ -2.08
HMGB1P10-201ENST00000395823 FXYD3Q14802 87 aa2.06□□□□□ -2.08
HMGB1P10-201ENST00000395823 FAM103A1Q9BTL3 118 aaKnown RBP2.06□□□□□ -2.08
HMGB1P10-201ENST00000395823 ATRQ13535 2644 aa2.06□□□□□ -2.08
HMGB1P10-201ENST00000395823 NBEAL1Q6ZS30 2694 aa2.06□□□□□ -2.08
HMGB1P10-201ENST00000395823 ABCC6O95255 1503 aa2.06□□□□□ -2.08
HMGB1P10-201ENST00000395823 EP300Q09472 2414 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P10-201ENST00000395823 LRRK2Q5S007 2527 aa2.06□□□□□ -2.08
HMGB1P10-201ENST00000395823 IGSF10Q6WRI0 2623 aa2.05□□□□□ -2.08
HMGB1P10-201ENST00000395823 NF1P21359 2839 aa2.05□□□□□ -2.08
HMGB1P10-201ENST00000395823 MYOFQ9NZM1 2061 aa2.05□□□□□ -2.08
HMGB1P10-201ENST00000395823 TRBV7-4A0A0J9YYF1 115 aa2.05□□□□□ -2.08
HMGB1P10-201ENST00000395823 IGKV2-29A2NJV5 120 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P10-201ENST00000395823 FXYD4P59646 89 aa2.05□□□□□ -2.08
HMGB1P10-201ENST00000395823 Q6ZRN7 208 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P10-201ENST00000395823 COA5Q86WW8 74 aa2.05□□□□□ -2.08
HMGB1P10-201ENST00000395823 KRTAP4-3Q9BYR4 195 aa2.05□□□□□ -2.08
HMGB1P10-201ENST00000395823 PROK2Q9HC23 129 aa2.05□□□□□ -2.08
HMGB1P10-201ENST00000395823 STAB1Q9NY15 2570 aa2.05□□□□□ -2.08
HMGB1P10-201ENST00000395823 BOD1L1Q8NFC6 3051 aa2.05□□□□□ -2.08
HMGB1P10-201ENST00000395823 GCC2Q8IWJ2 1684 aa2.05□□□□□ -2.08
HMGB1P10-201ENST00000395823 PCLOQ9Y6V0 5065 aa2.05□□□□□ -2.08
HMGB1P10-201ENST00000395823 FLNCQ14315 2725 aa2.04□□□□□ -2.08
HMGB1P10-201ENST00000395823 TRIOO75962 3097 aa2.04□□□□□ -2.08
HMGB1P10-201ENST00000395823 WDFY3Q8IZQ1 3526 aa2.04□□□□□ -2.08
HMGB1P10-201ENST00000395823 UBR4Q5T4S7 5183 aa2.04□□□□□ -2.08
HMGB1P10-201ENST00000395823 NBPF19A0A087WUL8 3843 aa2.04□□□□□ -2.08
HMGB1P10-201ENST00000395823 NBDYA0A0U1RRE5 68 aa2.04□□□□□ -2.08
HMGB1P10-201ENST00000395823 COL5A3P25940 1745 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P10-201ENST00000395823 ZNF137PP52743 207 aa2.04□□□□□ -2.08
HMGB1P10-201ENST00000395823 MDC1Q14676 2089 aaKnown RBP2.04□□□□□ -2.08
HMGB1P10-201ENST00000395823 CDC42BPAQ5VT25 1732 aa2.04□□□□□ -2.08
HMGB1P10-201ENST00000395823 KDM3BQ7LBC6 1761 aa2.04□□□□□ -2.08
HMGB1P10-201ENST00000395823 ZGRF1Q86YA3 2104 aa2.04□□□□□ -2.08
HMGB1P10-201ENST00000395823 MED12LQ86YW9 2145 aa2.04□□□□□ -2.08
HMGB1P10-201ENST00000395823 EXPH5Q8NEV8 1989 aa2.04□□□□□ -2.08
HMGB1P10-201ENST00000395823 BAZ2BQ9UIF8 2168 aaKnown RBP2.04□□□□□ -2.08
HMGB1P10-201ENST00000395823 CRYBG1Q9Y4K1 1723 aa2.04□□□□□ -2.08
HMGB1P10-201ENST00000395823 OTOGLQ3ZCN5 2332 aa2.03□□□□□ -2.08
HMGB1P10-201ENST00000395823 RP1P56715 2156 aa2.03□□□□□ -2.08
HMGB1P10-201ENST00000395823 DOCK10Q96BY6 2186 aa2.03□□□□□ -2.08
HMGB1P10-201ENST00000395823 C4BP0C0L5 1744 aa2.03□□□□□ -2.08
HMGB1P10-201ENST00000395823 NRXN2Q9P2S2 1712 aa2.03□□□□□ -2.08
HMGB1P10-201ENST00000395823 TOGARAM1Q9Y4F4 1720 aa2.03□□□□□ -2.08
HMGB1P10-201ENST00000395823 FRYLO94915 3013 aa2.03□□□□□ -2.08
HMGB1P10-201ENST00000395823 NBEAL2Q6ZNJ1 2754 aa2.03□□□□□ -2.08
HMGB1P10-201ENST00000395823 A0A087WVE0 104 aa2.03□□□□□ -2.08
HMGB1P10-201ENST00000395823 C5orf56Q8N8D9 126 aa2.03□□□□□ -2.08
HMGB1P10-201ENST00000395823 MTORP42345 2549 aa2.03□□□□□ -2.08
HMGB1P10-201ENST00000395823 IGF2RP11717 2491 aa2.03□□□□□ -2.08
HMGB1P10-201ENST00000395823 RTTNQ86VV8 2226 aa2.03□□□□□ -2.08
HMGB1P10-201ENST00000395823 UBR3Q6ZT12 1888 aa2.03□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms