RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 LOC100131303A0A0U1RQF7 123 aa7.14□□□□□ -1.27
HIF1A-203ENST00000394997 WIPF1O43516 503 aa7.14□□□□□ -1.27
HIF1A-203ENST00000394997 SMIM1B2RUZ4 78 aa7.14□□□□□ -1.27
HIF1A-203ENST00000394997 CDC42SE2Q9NRR3 84 aa7.14□□□□□ -1.27
HIF1A-203ENST00000394997 C22orf24Q9Y442 160 aa7.14□□□□□ -1.27
HIF1A-203ENST00000394997 K7EQD1 137 aa7.13□□□□□ -1.27
HIF1A-203ENST00000394997 DPH3Q96FX2 82 aa7.13□□□□□ -1.27
HIF1A-203ENST00000394997 TRBV10-1A0A0K0K1A3 114 aa7.13□□□□□ -1.27
HIF1A-203ENST00000394997 LINC00337Q8N6G1 96 aa7.12□□□□□ -1.27
HIF1A-203ENST00000394997 PLECQ15149 4684 aaKnown RBP7.12□□□□□ -1.27
HIF1A-203ENST00000394997 CRYGAP11844 174 aa7.12□□□□□ -1.27
HIF1A-203ENST00000394997 PRR3P79522 188 aaKnown RBP7.12□□□□□ -1.27
HIF1A-203ENST00000394997 SS18Q15532 418 aa7.12□□□□□ -1.27
HIF1A-203ENST00000394997 CCL18P55774 89 aa7.11□□□□□ -1.27
HIF1A-203ENST00000394997 Q6JHZ5 121 aa7.11□□□□□ -1.27
HIF1A-203ENST00000394997 JMJD7-PLA2G4BH0Y9G9 81 aa7.1□□□□□ -1.27
HIF1A-203ENST00000394997 TRBV6-4A0A1B0GX49 114 aa7.1□□□□□ -1.27
HIF1A-203ENST00000394997 C16orf74Q96GX8 76 aa7.1□□□□□ -1.27
HIF1A-203ENST00000394997 HECTD4Q9Y4D8 3996 aa7.09□□□□□ -1.27
HIF1A-203ENST00000394997 FAM222AQ5U5X8 452 aa7.08□□□□□ -1.28
HIF1A-203ENST00000394997 TENM3Q9P273 2699 aa7.08□□□□□ -1.28
HIF1A-203ENST00000394997 C6orf99Q4VX62 202 aa7.08□□□□□ -1.28
HIF1A-203ENST00000394997 TMEM256-PLSCR3K7ERE1 68 aa7.08□□□□□ -1.28
HIF1A-203ENST00000394997 NDUFC2O95298 119 aa7.08□□□□□ -1.28
HIF1A-203ENST00000394997 RPL28P46779 137 aaKnown RBP7.08□□□□□ -1.28
HIF1A-203ENST00000394997 IGLV4-60A0A075B6I1 120 aa7.08□□□□□ -1.28
HIF1A-203ENST00000394997 F8WEM9 126 aa7.08□□□□□ -1.28
HIF1A-203ENST00000394997 DNAH2Q9P225 4427 aa7.07□□□□□ -1.28
HIF1A-203ENST00000394997 ANGP03950 147 aaKnown RBP7.07□□□□□ -1.28
HIF1A-203ENST00000394997 IGHV4-28A0A0C4DH34 117 aa7.07□□□□□ -1.28
HIF1A-203ENST00000394997 C9orf129Q5T035 196 aaKnown RBP7.07□□□□□ -1.28
HIF1A-203ENST00000394997 STARD9Q9P2P6 4700 aa7.06□□□□□ -1.28
HIF1A-203ENST00000394997 IGHV3OR16-9A0A0B4J2B5 98 aa7.06□□□□□ -1.28
HIF1A-203ENST00000394997 CYSTM1Q9H1C7 97 aa7.06□□□□□ -1.28
HIF1A-203ENST00000394997 RMI2Q96E14 147 aa7.06□□□□□ -1.28
HIF1A-203ENST00000394997 FRAS1Q86XX4 4008 aa7.04□□□□□ -1.28
HIF1A-203ENST00000394997 LRCOL1A6NCL2 159 aa7.04□□□□□ -1.28
HIF1A-203ENST00000394997 CCKP06307 115 aa7.04□□□□□ -1.28
HIF1A-203ENST00000394997 Q8NAQ8 132 aa7.04□□□□□ -1.28
HIF1A-203ENST00000394997 VPS13DQ5THJ4 4388 aa7.04□□□□□ -1.28
HIF1A-203ENST00000394997 RPS28P62857 69 aaKnown RBP7.04□□□□□ -1.28
HIF1A-203ENST00000394997 LINC01561Q8N1V8 128 aa7.04□□□□□ -1.28
HIF1A-203ENST00000394997 LINC00269Q8N2A0 174 aa7.04□□□□□ -1.28
HIF1A-203ENST00000394997 IGKV2-28A0A075B6P5 120 aa7.03□□□□□ -1.28
HIF1A-203ENST00000394997 IBA57-AS1B1ANH7 110 aa7.03□□□□□ -1.28
HIF1A-203ENST00000394997 IGKV2D-28P01615 120 aa7.03□□□□□ -1.28
HIF1A-203ENST00000394997 GYPEP15421 78 aa7.03□□□□□ -1.28
HIF1A-203ENST00000394997 DEFB105AQ8NG35 78 aa7.03□□□□□ -1.28
HIF1A-203ENST00000394997 TRBV6-8A0A0A6YYG3 113 aa7.02□□□□□ -1.29
HIF1A-203ENST00000394997 CMC4P56277 68 aaPredicted RBP7.02□□□□□ -1.29
HIF1A-203ENST00000394997 C9orf116Q5BN46 136 aaPredicted RBP7.02□□□□□ -1.29
HIF1A-203ENST00000394997 Q6ZQY7 126 aa7.02□□□□□ -1.29
HIF1A-203ENST00000394997 ATP5EP2Q5VTU8 51 aa7.01□□□□□ -1.29
HIF1A-203ENST00000394997 Q8N3U1 123 aa7.01□□□□□ -1.29
HIF1A-203ENST00000394997 Q8NDZ9 215 aa7.01□□□□□ -1.29
HIF1A-203ENST00000394997 UBE2DNLQ8IWF7 75 aa7□□□□□ -1.29
HIF1A-203ENST00000394997 CELA1Q9UNI1 258 aa7□□□□□ -1.29
HIF1A-203ENST00000394997 DEFB4AO15263 64 aa7□□□□□ -1.29
HIF1A-203ENST00000394997 KIAA0087Q14695 138 aa7□□□□□ -1.29
HIF1A-203ENST00000394997 C2orf48Q96LS8 159 aa7□□□□□ -1.29
HIF1A-203ENST00000394997 NDUFC2-KCTD14E9PQ53 114 aa7□□□□□ -1.29
HIF1A-203ENST00000394997 PRR4Q16378 134 aa7□□□□□ -1.29
HIF1A-203ENST00000394997 XAGE1AQ9HD64 81 aa7□□□□□ -1.29
HIF1A-203ENST00000394997 A0A1B0GUV1 79 aa6.99□□□□□ -1.29
HIF1A-203ENST00000394997 SERP1Q9Y6X1 66 aa6.99□□□□□ -1.29
HIF1A-203ENST00000394997 A0A087WZ39 114 aa6.99□□□□□ -1.29
HIF1A-203ENST00000394997 SMIM26A0A096LP01 95 aa6.99□□□□□ -1.29
HIF1A-203ENST00000394997 Q8N814 137 aa6.99□□□□□ -1.29
HIF1A-203ENST00000394997 V9GYY9 64 aa6.99□□□□□ -1.29
HIF1A-203ENST00000394997 C1orf195Q5TG92 126 aa6.98□□□□□ -1.29
HIF1A-203ENST00000394997 LINC00336Q6ZUF6 198 aa6.98□□□□□ -1.29
HIF1A-203ENST00000394997 NREPQ16612 68 aa6.98□□□□□ -1.29
HIF1A-203ENST00000394997 TRAV7A0A075B6U4 112 aa6.97□□□□□ -1.29
HIF1A-203ENST00000394997 NANOS2P60321 138 aaKnown RBP6.97□□□□□ -1.29
HIF1A-203ENST00000394997 KMT2AQ03164 3969 aa6.97□□□□□ -1.29
HIF1A-203ENST00000394997 KRTAP10-11P60412 298 aa6.97□□□□□ -1.29
HIF1A-203ENST00000394997 KRTAP26-1Q6PEX3 210 aa6.97□□□□□ -1.29
HIF1A-203ENST00000394997 Q8N9L7 120 aa6.97□□□□□ -1.29
HIF1A-203ENST00000394997 PRO0628Q9UI54 55 aa6.97□□□□□ -1.29
HIF1A-203ENST00000394997 STAB2Q8WWQ8 2551 aa6.97□□□□□ -1.29
HIF1A-203ENST00000394997 C3orf84H3BNL1 204 aa6.96□□□□□ -1.29
HIF1A-203ENST00000394997 OXLD1Q5BKU9 147 aa6.96□□□□□ -1.29
HIF1A-203ENST00000394997 DNAH8Q96JB1 4490 aa6.96□□□□□ -1.3
HIF1A-203ENST00000394997 LINC00959A0A1B0GUT2 108 aa6.96□□□□□ -1.3
HIF1A-203ENST00000394997 DNAH6Q9C0G6 4158 aa6.96□□□□□ -1.3
HIF1A-203ENST00000394997 FBN3Q75N90 2809 aa6.96□□□□□ -1.3
HIF1A-203ENST00000394997 MIFP14174 115 aa6.95□□□□□ -1.3
HIF1A-203ENST00000394997 SPAG11BQ08648 103 aa6.95□□□□□ -1.3
HIF1A-203ENST00000394997 FUSP35637 526 aaKnown RBP eCLIP6.95□□□□□ -1.3
HIF1A-203ENST00000394997 TRAV10A0A0B4J240 114 aa6.95□□□□□ -1.3
HIF1A-203ENST00000394997 LINC00474Q9P2X8 69 aa6.95□□□□□ -1.3
HIF1A-203ENST00000394997 LINC01547P58512 204 aaPredicted RBP6.94□□□□□ -1.3
HIF1A-203ENST00000394997 TRBV7-6A0A0J9YX20 115 aa6.94□□□□□ -1.3
HIF1A-203ENST00000394997 ZNF561-AS1K7EIQ3 104 aa6.94□□□□□ -1.3
HIF1A-203ENST00000394997 EGFEM1PQ0D2K5 195 aa6.94□□□□□ -1.3
HIF1A-203ENST00000394997 Q6ZVQ6 151 aa6.94□□□□□ -1.3
HIF1A-203ENST00000394997 DIRC1Q969H9 104 aa6.94□□□□□ -1.3
HIF1A-203ENST00000394997 CHCHD10Q8WYQ3 142 aaPredicted RBP6.93□□□□□ -1.3
HIF1A-203ENST00000394997 PRR34Q9NV39 138 aa6.93□□□□□ -1.3
HIF1A-203ENST00000394997 KLK12Q9UKR0 248 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms