RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 NDUFA6P56556 154 aa5.22□□□□□ -1.57
ATG4A-205ENST00000394892 KRTAP13-2Q52LG2 175 aa5.22□□□□□ -1.57
ATG4A-205ENST00000394892 ZNF625Q96I27 306 aaPredicted RBP5.22□□□□□ -1.57
ATG4A-205ENST00000394892 SND1-IT1Q9HBX3 110 aa5.22□□□□□ -1.57
ATG4A-205ENST00000394892 HSBP1L1C9JCN9 74 aa5.21□□□□□ -1.58
ATG4A-205ENST00000394892 PFN2P35080 140 aa5.21□□□□□ -1.58
ATG4A-205ENST00000394892 LINC00310P59036 64 aa5.21□□□□□ -1.58
ATG4A-205ENST00000394892 BAGE3Q86Y29 109 aa5.21□□□□□ -1.58
ATG4A-205ENST00000394892 H3BRM9 83 aa5.2□□□□□ -1.58
ATG4A-205ENST00000394892 RPL13AP40429 203 aaKnown RBP5.2□□□□□ -1.58
ATG4A-205ENST00000394892 CBLN2Q8IUK8 224 aa5.2□□□□□ -1.58
ATG4A-205ENST00000394892 KRTAP9-2Q9BYQ4 174 aa5.2□□□□□ -1.58
ATG4A-205ENST00000394892 ERG28Q9UKR5 140 aa5.2□□□□□ -1.58
ATG4A-205ENST00000394892 IGKV2-28A0A075B6P5 120 aa5.19□□□□□ -1.58
ATG4A-205ENST00000394892 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.19□□□□□ -1.58
ATG4A-205ENST00000394892 TMEM238C9JI98 176 aa5.19□□□□□ -1.58
ATG4A-205ENST00000394892 ATP5LO75964 103 aa5.19□□□□□ -1.58
ATG4A-205ENST00000394892 SNAPINO95295 136 aa5.19□□□□□ -1.58
ATG4A-205ENST00000394892 SCGB1D1O95968 90 aa5.19□□□□□ -1.58
ATG4A-205ENST00000394892 IGKV2D-28P01615 120 aa5.19□□□□□ -1.58
ATG4A-205ENST00000394892 SVBPQ8N300 66 aa5.19□□□□□ -1.58
ATG4A-205ENST00000394892 MUC2Q02817 5179 aa5.19□□□□□ -1.58
ATG4A-205ENST00000394892 TMEM223A0PJW6 202 aa5.18□□□□□ -1.58
ATG4A-205ENST00000394892 M0R378 163 aa5.18□□□□□ -1.58
ATG4A-205ENST00000394892 RPL28P46779 137 aaKnown RBP5.18□□□□□ -1.58
ATG4A-205ENST00000394892 TMEM170BQ5T4T1 132 aa5.18□□□□□ -1.58
ATG4A-205ENST00000394892 FAM19A2Q8N3H0 131 aa5.18□□□□□ -1.58
ATG4A-205ENST00000394892 TRAV12-1A0A0B4J245 112 aa5.17□□□□□ -1.58
ATG4A-205ENST00000394892 TSPAN13O95857 204 aa5.17□□□□□ -1.58
ATG4A-205ENST00000394892 PRLHP81277 87 aa5.17□□□□□ -1.58
ATG4A-205ENST00000394892 PET117Q6UWS5 81 aa5.17□□□□□ -1.58
ATG4A-205ENST00000394892 NKAPP1Q8N9T2 125 aa5.17□□□□□ -1.58
ATG4A-205ENST00000394892 A0A0U1RRA0 63 aa5.16□□□□□ -1.58
ATG4A-205ENST00000394892 KRTAP9-6A0A140TA67 174 aa5.16□□□□□ -1.58
ATG4A-205ENST00000394892 PCP4P48539 62 aa5.16□□□□□ -1.58
ATG4A-205ENST00000394892 IFI27L1Q96BM0 104 aa5.16□□□□□ -1.58
ATG4A-205ENST00000394892 CHCHD1Q96BP2 118 aaKnown RBP5.16□□□□□ -1.58
ATG4A-205ENST00000394892 TMEM126AQ9H061 195 aa5.16□□□□□ -1.58
ATG4A-205ENST00000394892 A4D1N5 150 aa5.15□□□□□ -1.59
ATG4A-205ENST00000394892 TRGC2P03986 189 aa5.15□□□□□ -1.59
ATG4A-205ENST00000394892 TSPEAR-AS2P59090 65 aa5.15□□□□□ -1.59
ATG4A-205ENST00000394892 COX17Q14061 63 aa5.15□□□□□ -1.59
ATG4A-205ENST00000394892 SMIM13P0DJ93 91 aa5.14□□□□□ -1.59
ATG4A-205ENST00000394892 CRYGAP11844 174 aa5.14□□□□□ -1.59
ATG4A-205ENST00000394892 UBE2AP49459 152 aa5.14□□□□□ -1.59
ATG4A-205ENST00000394892 NDUFA5Q16718 116 aa5.14□□□□□ -1.59
ATG4A-205ENST00000394892 TYMSOSQ8TAI1 123 aa5.14□□□□□ -1.59
ATG4A-205ENST00000394892 PLEKHB2Q96CS7 222 aa5.14□□□□□ -1.59
ATG4A-205ENST00000394892 MUC17Q685J3 4493 aa5.14□□□□□ -1.59
ATG4A-205ENST00000394892 SERF1AO75920 110 aa5.13□□□□□ -1.59
ATG4A-205ENST00000394892 LINC00158P58513 81 aa5.13□□□□□ -1.59
ATG4A-205ENST00000394892 FAM19A1Q7Z5A9 133 aa5.13□□□□□ -1.59
ATG4A-205ENST00000394892 C3orf22Q8N5N4 141 aa5.13□□□□□ -1.59
ATG4A-205ENST00000394892 COLCA2A8K830 154 aa5.12□□□□□ -1.59
ATG4A-205ENST00000394892 KRTAP4-16G5E9R7 235 aaPredicted RBP5.12□□□□□ -1.59
ATG4A-205ENST00000394892 S100A1P23297 94 aa5.12□□□□□ -1.59
ATG4A-205ENST00000394892 S100A12P80511 92 aa5.12□□□□□ -1.59
ATG4A-205ENST00000394892 RPL24P83731 157 aaKnown RBP5.12□□□□□ -1.59
ATG4A-205ENST00000394892 FAM229BQ4G0N7 80 aa5.12□□□□□ -1.59
ATG4A-205ENST00000394892 MIR7-3HGQ8N6C7 128 aa5.12□□□□□ -1.59
ATG4A-205ENST00000394892 LOC105371267A0A1B0GV96 52 aa5.11□□□□□ -1.59
ATG4A-205ENST00000394892 HSBP1O75506 76 aa5.11□□□□□ -1.59
ATG4A-205ENST00000394892 RETNLBQ9BQ08 111 aa5.11□□□□□ -1.59
ATG4A-205ENST00000394892 PMCHL2Q9BQD1 86 aa5.11□□□□□ -1.59
ATG4A-205ENST00000394892 NDUFA12Q9UI09 145 aa5.11□□□□□ -1.59
ATG4A-205ENST00000394892 H0Y8G0 127 aa5.1□□□□□ -1.59
ATG4A-205ENST00000394892 SPRR1AP35321 89 aa5.1□□□□□ -1.59
ATG4A-205ENST00000394892 SFTA2Q6UW10 78 aa5.1□□□□□ -1.59
ATG4A-205ENST00000394892 BOD1L2Q8IYS8 172 aa5.1□□□□□ -1.59
ATG4A-205ENST00000394892 NCR3O14931 201 aa5.09□□□□□ -1.59
ATG4A-205ENST00000394892 DAND5Q8N907 189 aa5.09□□□□□ -1.59
ATG4A-205ENST00000394892 LINC00304Q8N9R0 145 aa5.09□□□□□ -1.59
ATG4A-205ENST00000394892 SPRR4Q96PI1 79 aa5.09□□□□□ -1.59
ATG4A-205ENST00000394892 KCNQ1DNQ9H478 68 aa5.09□□□□□ -1.59
ATG4A-205ENST00000394892 FAT4Q6V0I7 4981 aa5.08□□□□□ -1.6
ATG4A-205ENST00000394892 LOC107984156A0A0G2JMH3 177 aa5.08□□□□□ -1.6
ATG4A-205ENST00000394892 TRBV10-3A0A0K0K1G6 114 aa5.08□□□□□ -1.6
ATG4A-205ENST00000394892 LEPROTO15243 131 aa5.08□□□□□ -1.6
ATG4A-205ENST00000394892 LEPROTL1O95214 131 aa5.08□□□□□ -1.6
ATG4A-205ENST00000394892 ARL17AQ8IVW1 177 aa5.08□□□□□ -1.6
ATG4A-205ENST00000394892 SMCR5Q8TEV8 140 aa5.08□□□□□ -1.6
ATG4A-205ENST00000394892 HIGD2AQ9BW72 106 aa5.08□□□□□ -1.6
ATG4A-205ENST00000394892 ERC2-IT1O76042 136 aa5.07□□□□□ -1.6
ATG4A-205ENST00000394892 FABP4P15090 132 aa5.07□□□□□ -1.6
ATG4A-205ENST00000394892 HERV-K104P63124 156 aa5.07□□□□□ -1.6
ATG4A-205ENST00000394892 MEIG1Q5JSS6 88 aa5.07□□□□□ -1.6
ATG4A-205ENST00000394892 SOSTDC1Q6X4U4 206 aa5.07□□□□□ -1.6
ATG4A-205ENST00000394892 IGKV2D-26A0A0A0MRZ7 120 aa5.06□□□□□ -1.6
ATG4A-205ENST00000394892 MYMXA0A1B0GTQ4 84 aa5.06□□□□□ -1.6
ATG4A-205ENST00000394892 J3QQQ9 107 aa5.06□□□□□ -1.6
ATG4A-205ENST00000394892 PRYO14603 147 aa5.06□□□□□ -1.6
ATG4A-205ENST00000394892 ADAMTSL4-AS1Q5T5F5 129 aa5.06□□□□□ -1.6
ATG4A-205ENST00000394892 LINC00337Q8N6G1 96 aa5.06□□□□□ -1.6
ATG4A-205ENST00000394892 CDIP1Q9H305 208 aa5.06□□□□□ -1.6
ATG4A-205ENST00000394892 B5MCH6 92 aa5.05□□□□□ -1.6
ATG4A-205ENST00000394892 DPM2O94777 84 aa5.05□□□□□ -1.6
ATG4A-205ENST00000394892 Q9BRP9 147 aa5.05□□□□□ -1.6
ATG4A-205ENST00000394892 PPDPFQ9H3Y8 114 aa5.05□□□□□ -1.6
ATG4A-205ENST00000394892 PLNP26678 52 aa5.04□□□□□ -1.6
ATG4A-205ENST00000394892 LINC00483Q53H64 154 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms