RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 CASC2Q6XLA1 102 aa5.81□□□□□ -1.48
GABRA1-202ENST00000393943 Q6ZRX8 168 aa5.81□□□□□ -1.48
GABRA1-202ENST00000393943 HIVEP2P31629 2446 aa5.81□□□□□ -1.48
GABRA1-202ENST00000393943 IGKV4-1P06312 121 aa5.81□□□□□ -1.48
GABRA1-202ENST00000393943 LINC01556Q5JQF7 62 aa5.81□□□□□ -1.48
GABRA1-202ENST00000393943 CEP295Q9C0D2 2601 aa5.8□□□□□ -1.48
GABRA1-202ENST00000393943 C7orf33Q8WU49 177 aa5.8□□□□□ -1.48
GABRA1-202ENST00000393943 PRR15LQ9BU68 103 aa5.8□□□□□ -1.48
GABRA1-202ENST00000393943 PTPN13Q12923 2485 aa5.8□□□□□ -1.48
GABRA1-202ENST00000393943 H0Y9P7 68 aa5.8□□□□□ -1.48
GABRA1-202ENST00000393943 KCNQ1DNQ9H478 68 aa5.8□□□□□ -1.48
GABRA1-202ENST00000393943 C19orf73Q9NVV2 129 aa5.8□□□□□ -1.48
GABRA1-202ENST00000393943 CACNA1AO00555 2505 aa5.8□□□□□ -1.48
GABRA1-202ENST00000393943 PRB2P02812 416 aaPredicted RBP5.79□□□□□ -1.48
GABRA1-202ENST00000393943 PSPHP1O15172 72 aa5.78□□□□□ -1.48
GABRA1-202ENST00000393943 PRR4Q16378 134 aa5.78□□□□□ -1.48
GABRA1-202ENST00000393943 ZNF706Q9Y5V0 76 aaPredicted RBP5.78□□□□□ -1.48
GABRA1-202ENST00000393943 USP9XQ93008 2570 aaPredicted RBP5.78□□□□□ -1.48
GABRA1-202ENST00000393943 CYP4F30PQ9H0H9 118 aa5.78□□□□□ -1.48
GABRA1-202ENST00000393943 TP53AIP1Q9HCN2 124 aa5.77□□□□□ -1.49
GABRA1-202ENST00000393943 LINC00474Q9P2X8 69 aa5.77□□□□□ -1.49
GABRA1-202ENST00000393943 PLA2G2DQ9UNK4 145 aa5.77□□□□□ -1.49
GABRA1-202ENST00000393943 LRCOL1A6NCL2 159 aa5.76□□□□□ -1.49
GABRA1-202ENST00000393943 KRTAP10-9P60411 292 aa5.76□□□□□ -1.49
GABRA1-202ENST00000393943 OCR1Q9BZK8 76 aa5.76□□□□□ -1.49
GABRA1-202ENST00000393943 USP9YO00507 2555 aaPredicted RBP5.76□□□□□ -1.49
GABRA1-202ENST00000393943 MKI67P46013 3256 aaKnown RBP5.76□□□□□ -1.49
GABRA1-202ENST00000393943 A0A087WSZ3 146 aa5.76□□□□□ -1.49
GABRA1-202ENST00000393943 CYSTM1Q9H1C7 97 aa5.76□□□□□ -1.49
GABRA1-202ENST00000393943 Q8NAQ8 132 aa5.75□□□□□ -1.49
GABRA1-202ENST00000393943 BRCA2P51587 3418 aa5.75□□□□□ -1.49
GABRA1-202ENST00000393943 IGKV2-24A0A0C4DH68 120 aa5.75□□□□□ -1.49
GABRA1-202ENST00000393943 DOPEY1Q5JWR5 2465 aa5.75□□□□□ -1.49
GABRA1-202ENST00000393943 IGLV5-48A0A075B6I7 105 aa5.75□□□□□ -1.49
GABRA1-202ENST00000393943 PRR15Q8IV56 129 aa5.74□□□□□ -1.49
GABRA1-202ENST00000393943 Q9BRP9 147 aa5.74□□□□□ -1.49
GABRA1-202ENST00000393943 Q1T7F1 81 aa5.74□□□□□ -1.49
GABRA1-202ENST00000393943 C1orf64Q8NEQ6 169 aa5.74□□□□□ -1.49
GABRA1-202ENST00000393943 TLX1NBP0CAT3 122 aa5.73□□□□□ -1.49
GABRA1-202ENST00000393943 SPANXA2-OT1Q8N9U9 137 aa5.73□□□□□ -1.49
GABRA1-202ENST00000393943 Q6ZTC4 211 aa5.72□□□□□ -1.49
GABRA1-202ENST00000393943 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.72□□□□□ -1.49
GABRA1-202ENST00000393943 LINC00476Q8WZB0 136 aa5.72□□□□□ -1.49
GABRA1-202ENST00000393943 TLN2Q9Y4G6 2542 aa5.72□□□□□ -1.49
GABRA1-202ENST00000393943 Q6ZRP5 223 aa5.71□□□□□ -1.5
GABRA1-202ENST00000393943 Q8N377 158 aa5.71□□□□□ -1.5
GABRA1-202ENST00000393943 EPM2AB3EWF7 344 aa5.71□□□□□ -1.5
GABRA1-202ENST00000393943 M0R2N4 97 aa5.71□□□□□ -1.5
GABRA1-202ENST00000393943 OXTP01178 125 aa5.7□□□□□ -1.5
GABRA1-202ENST00000393943 IGLV1-50A0A075B6I6 118 aa5.7□□□□□ -1.5
GABRA1-202ENST00000393943 TRAV22A0A0B4J277 110 aa5.7□□□□□ -1.5
GABRA1-202ENST00000393943 ANKRD17O75179 2603 aaKnown RBP5.7□□□□□ -1.5
GABRA1-202ENST00000393943 NCOR2Q9Y618 2525 aa5.7□□□□□ -1.5
GABRA1-202ENST00000393943 FP248Q71RG6 208 aaPredicted RBP5.7□□□□□ -1.5
GABRA1-202ENST00000393943 ABCA2Q9BZC7 2435 aa5.69□□□□□ -1.5
GABRA1-202ENST00000393943 FN1P02751 2386 aaKnown RBP5.69□□□□□ -1.5
GABRA1-202ENST00000393943 CD164Q04900 197 aa5.69□□□□□ -1.5
GABRA1-202ENST00000393943 SONP18583 2426 aaKnown RBP5.69□□□□□ -1.5
GABRA1-202ENST00000393943 K7EQZ3 153 aa5.69□□□□□ -1.5
GABRA1-202ENST00000393943 LAMA2P24043 3122 aaKnown RBP5.69□□□□□ -1.5
GABRA1-202ENST00000393943 IGLV5-37A0A075B6J1 123 aa5.68□□□□□ -1.5
GABRA1-202ENST00000393943 CCDC168Q8NDH2 2452 aa5.68□□□□□ -1.5
GABRA1-202ENST00000393943 DNAH10OSP0CZ25 163 aa5.68□□□□□ -1.5
GABRA1-202ENST00000393943 C15orf56Q8N910 161 aa5.68□□□□□ -1.5
GABRA1-202ENST00000393943 SPRR4Q96PI1 79 aa5.68□□□□□ -1.5
GABRA1-202ENST00000393943 A8MWP4 228 aa5.67□□□□□ -1.5
GABRA1-202ENST00000393943 MOBPQ13875 183 aa5.67□□□□□ -1.5
GABRA1-202ENST00000393943 INAFM1C9JVW0 142 aa5.66□□□□□ -1.5
GABRA1-202ENST00000393943 ATP11AUNQ6ZP68 121 aa5.66□□□□□ -1.5
GABRA1-202ENST00000393943 A0A1W2PNM2 257 aa5.65□□□□□ -1.5
GABRA1-202ENST00000393943 RANBP2P49792 3224 aaKnown RBP5.65□□□□□ -1.5
GABRA1-202ENST00000393943 A0A096LNI7 61 aa5.65□□□□□ -1.51
GABRA1-202ENST00000393943 A8MUN3 132 aa5.65□□□□□ -1.51
GABRA1-202ENST00000393943 ST20-AS1Q8NBB2 130 aa5.65□□□□□ -1.51
GABRA1-202ENST00000393943 SERTAD4-AS1Q5TG53 156 aa5.64□□□□□ -1.51
GABRA1-202ENST00000393943 PIEZO1Q92508 2521 aa5.64□□□□□ -1.51
GABRA1-202ENST00000393943 C16orf90A8MZG2 172 aa5.63□□□□□ -1.51
GABRA1-202ENST00000393943 RETNQ9HD89 108 aa5.63□□□□□ -1.51
GABRA1-202ENST00000393943 PRLHP81277 87 aa5.63□□□□□ -1.51
GABRA1-202ENST00000393943 DEFB116Q30KQ4 102 aa5.63□□□□□ -1.51
GABRA1-202ENST00000393943 ABCA12Q86UK0 2595 aa5.63□□□□□ -1.51
GABRA1-202ENST00000393943 PCOTHQ58A44 107 aa5.62□□□□□ -1.51
GABRA1-202ENST00000393943 IGFL1Q6UW32 110 aa5.62□□□□□ -1.51
GABRA1-202ENST00000393943 KTN1-AS1Q86SY8 53 aa5.62□□□□□ -1.51
GABRA1-202ENST00000393943 MYO18BQ8IUG5 2567 aa5.62□□□□□ -1.51
GABRA1-202ENST00000393943 LOC101927531A0A1B0GV80 90 aa5.62□□□□□ -1.51
GABRA1-202ENST00000393943 COA5Q86WW8 74 aa5.62□□□□□ -1.51
GABRA1-202ENST00000393943 RPL37AP61513 92 aaKnown RBP5.61□□□□□ -1.51
GABRA1-202ENST00000393943 Q8NDZ9 215 aa5.61□□□□□ -1.51
GABRA1-202ENST00000393943 IGLV9-49A0A0B4J1Y8 123 aa5.6□□□□□ -1.51
GABRA1-202ENST00000393943 ACYP2P14621 99 aa5.6□□□□□ -1.51
GABRA1-202ENST00000393943 IGHV6-1A0A0B4J1U7 121 aa5.6□□□□□ -1.51
GABRA1-202ENST00000393943 OXLD1Q5BKU9 147 aa5.6□□□□□ -1.51
GABRA1-202ENST00000393943 CFAP54Q96N23 3096 aa5.6□□□□□ -1.51
GABRA1-202ENST00000393943 DSCR10P59022 87 aa5.59□□□□□ -1.51
GABRA1-202ENST00000393943 JMJD1CQ15652 2540 aa5.58□□□□□ -1.52
GABRA1-202ENST00000393943 SPRR1AP35321 89 aa5.58□□□□□ -1.52
GABRA1-202ENST00000393943 LAMA3Q16787 3333 aa5.57□□□□□ -1.52
GABRA1-202ENST00000393943 SETD2Q9BYW2 2564 aaPredicted RBP5.57□□□□□ -1.52
GABRA1-202ENST00000393943 KRTAP1-3Q8IUG1 177 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms