RNA–Protein interactions for RNA: ENST00000393743.7

DDX60-201, Transcript of DExD/H-box helicase 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX60, Length 6,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-201ENST00000393743 TET2Q6N021 2002 aaPredicted RBP4.94□□□□□ -1.62
DDX60-201ENST00000393743 Q6ZRX8 168 aa4.94□□□□□ -1.62
DDX60-201ENST00000393743 TYMSOSQ8TAI1 123 aa4.94□□□□□ -1.62
DDX60-201ENST00000393743 FN1P02751 2386 aaKnown RBP4.94□□□□□ -1.62
DDX60-201ENST00000393743 ACYP2P14621 99 aa4.94□□□□□ -1.62
DDX60-201ENST00000393743 PCOTHQ58A44 107 aa4.94□□□□□ -1.62
DDX60-201ENST00000393743 SPATA3Q8NHX4 192 aa4.93□□□□□ -1.62
DDX60-201ENST00000393743 SPACA4Q8TDM5 124 aa4.93□□□□□ -1.62
DDX60-201ENST00000393743 CCDC179H3BU77 68 aa4.92□□□□□ -1.62
DDX60-201ENST00000393743 LINC00588Q9Y4M8 146 aa4.92□□□□□ -1.62
DDX60-201ENST00000393743 IGKV2D-30A0A075B6S6 120 aa4.92□□□□□ -1.62
DDX60-201ENST00000393743 IGKV2-30P06310 120 aa4.92□□□□□ -1.62
DDX60-201ENST00000393743 SPAG11AQ6PDA7 123 aa4.92□□□□□ -1.62
DDX60-201ENST00000393743 LINC00846Q9NV44 126 aa4.92□□□□□ -1.62
DDX60-201ENST00000393743 LOC110117498A0A087WWA1 95 aa4.92□□□□□ -1.62
DDX60-201ENST00000393743 ZNF462Q96JM2 2506 aa4.92□□□□□ -1.62
DDX60-201ENST00000393743 A0A087WVE0 104 aa4.91□□□□□ -1.62
DDX60-201ENST00000393743 C7orf65Q6ZTY9 151 aa4.91□□□□□ -1.62
DDX60-201ENST00000393743 SPINK1P00995 79 aa4.91□□□□□ -1.62
DDX60-201ENST00000393743 LINC00313P59037 77 aa4.91□□□□□ -1.62
DDX60-201ENST00000393743 AGRNO00468 2067 aa4.91□□□□□ -1.62
DDX60-201ENST00000393743 A8MTW9 85 aa4.9□□□□□ -1.62
DDX60-201ENST00000393743 J3QL48 77 aa4.9□□□□□ -1.62
DDX60-201ENST00000393743 ATP11AUNQ6ZP68 121 aa4.9□□□□□ -1.62
DDX60-201ENST00000393743 A0A0U1RQV1 116 aa4.9□□□□□ -1.63
DDX60-201ENST00000393743 EPM2AB3EWF7 344 aa4.9□□□□□ -1.63
DDX60-201ENST00000393743 LINC00336Q6ZUF6 198 aa4.9□□□□□ -1.63
DDX60-201ENST00000393743 RETNLBQ9BQ08 111 aa4.9□□□□□ -1.63
DDX60-201ENST00000393743 RPL37AP61513 92 aaKnown RBP4.89□□□□□ -1.63
DDX60-201ENST00000393743 C1orf195Q5TG92 126 aa4.89□□□□□ -1.63
DDX60-201ENST00000393743 TLN2Q9Y4G6 2542 aa4.89□□□□□ -1.63
DDX60-201ENST00000393743 ANKRD11Q6UB99 2663 aaPredicted RBP4.89□□□□□ -1.63
DDX60-201ENST00000393743 TRBV7-4A0A0J9YYF1 115 aa4.89□□□□□ -1.63
DDX60-201ENST00000393743 LOC101927531A0A1B0GV80 90 aa4.89□□□□□ -1.63
DDX60-201ENST00000393743 USP9YO00507 2555 aaPredicted RBP4.88□□□□□ -1.63
DDX60-201ENST00000393743 LINC00476Q8WZB0 136 aa4.88□□□□□ -1.63
DDX60-201ENST00000393743 PHF5AQ7RTV0 110 aaKnown RBP4.88□□□□□ -1.63
DDX60-201ENST00000393743 SSBP3-AS1Q7Z2R9 100 aa4.88□□□□□ -1.63
DDX60-201ENST00000393743 PMAIP1Q13794 54 aa4.88□□□□□ -1.63
DDX60-201ENST00000393743 DEFB116Q30KQ4 102 aa4.88□□□□□ -1.63
DDX60-201ENST00000393743 A0A1B0GU69 56 aa4.88□□□□□ -1.63
DDX60-201ENST00000393743 C19orf73Q9NVV2 129 aa4.87□□□□□ -1.63
DDX60-201ENST00000393743 TRAV22A0A0B4J277 110 aa4.87□□□□□ -1.63
DDX60-201ENST00000393743 SMIM29Q86T20 159 aa4.86□□□□□ -1.63
DDX60-201ENST00000393743 Q6ZQT0 140 aa4.86□□□□□ -1.63
DDX60-201ENST00000393743 CEP295Q9C0D2 2601 aa4.86□□□□□ -1.63
DDX60-201ENST00000393743 VPREB1P12018 145 aa4.85□□□□□ -1.63
DDX60-201ENST00000393743 SOSTDC1Q6X4U4 206 aa4.85□□□□□ -1.63
DDX60-201ENST00000393743 IGLV6-57P01721 117 aa4.84□□□□□ -1.63
DDX60-201ENST00000393743 KCNQ1DNQ9H478 68 aa4.84□□□□□ -1.63
DDX60-201ENST00000393743 A8MWP4 228 aa4.84□□□□□ -1.64
DDX60-201ENST00000393743 ST20-AS1Q8NBB2 130 aa4.84□□□□□ -1.64
DDX60-201ENST00000393743 K7EIL1 84 aa4.83□□□□□ -1.64
DDX60-201ENST00000393743 PKD1L2Q7Z442 2459 aa4.83□□□□□ -1.64
DDX60-201ENST00000393743 CSNK1G2-AS1Q8NCQ2 148 aa4.83□□□□□ -1.64
DDX60-201ENST00000393743 PLA2G2DQ9UNK4 145 aa4.83□□□□□ -1.64
DDX60-201ENST00000393743 PRR34Q9NV39 138 aa4.83□□□□□ -1.64
DDX60-201ENST00000393743 FASNP49327 2511 aaKnown RBP4.83□□□□□ -1.64
DDX60-201ENST00000393743 F8P00451 2351 aa4.82□□□□□ -1.64
DDX60-201ENST00000393743 IGLV1-50A0A075B6I6 118 aa4.82□□□□□ -1.64
DDX60-201ENST00000393743 TLX1NBP0CAT3 122 aa4.82□□□□□ -1.64
DDX60-201ENST00000393743 PCSK5Q92824 1860 aa4.82□□□□□ -1.64
DDX60-201ENST00000393743 LINC00612Q8N6U2 182 aa4.82□□□□□ -1.64
DDX60-201ENST00000393743 MRPL34Q9BQ48 92 aaKnown RBP4.82□□□□□ -1.64
DDX60-201ENST00000393743 ZNF861PO60384 105 aa4.81□□□□□ -1.64
DDX60-201ENST00000393743 ERC2-IT1O76042 136 aa4.81□□□□□ -1.64
DDX60-201ENST00000393743 Q96NJ1 140 aa4.81□□□□□ -1.64
DDX60-201ENST00000393743 SETD2Q9BYW2 2564 aaPredicted RBP4.81□□□□□ -1.64
DDX60-201ENST00000393743 LINC00304Q8N9R0 145 aa4.81□□□□□ -1.64
DDX60-201ENST00000393743 TM2D3Q9BRN9 247 aa4.81□□□□□ -1.64
DDX60-201ENST00000393743 PTPRBP23467 1997 aa4.81□□□□□ -1.64
DDX60-201ENST00000393743 A0A096LNT2 108 aa4.81□□□□□ -1.64
DDX60-201ENST00000393743 PSPHP1O15172 72 aa4.8□□□□□ -1.64
DDX60-201ENST00000393743 C9orf163Q8N9P6 203 aa4.8□□□□□ -1.64
DDX60-201ENST00000393743 MTORP42345 2549 aa4.8□□□□□ -1.64
DDX60-201ENST00000393743 SRCAPQ6ZRS2 3230 aa4.8□□□□□ -1.64
DDX60-201ENST00000393743 A0A087WTM6 91 aa4.79□□□□□ -1.64
DDX60-201ENST00000393743 COX6B2Q6YFQ2 88 aa4.79□□□□□ -1.64
DDX60-201ENST00000393743 RPS28P62857 69 aaKnown RBP4.79□□□□□ -1.64
DDX60-201ENST00000393743 FAM218AQ96MZ4 157 aa4.79□□□□□ -1.64
DDX60-201ENST00000393743 MUC4Q99102 2169 aa4.79□□□□□ -1.64
DDX60-201ENST00000393743 WDR87Q6ZQQ6 2873 aa4.79□□□□□ -1.64
DDX60-201ENST00000393743 CDIP1Q9H305 208 aa4.79□□□□□ -1.64
DDX60-201ENST00000393743 CHTF8P0CG12 524 aa4.78□□□□□ -1.64
DDX60-201ENST00000393743 LINC00528Q8N1L1 170 aa4.78□□□□□ -1.64
DDX60-201ENST00000393743 COL27A1Q8IZC6 1860 aaPredicted RBP4.78□□□□□ -1.64
DDX60-201ENST00000393743 KRTAP10-11P60412 298 aa4.77□□□□□ -1.65
DDX60-201ENST00000393743 CNBPP62633 177 aaKnown RBP4.77□□□□□ -1.65
DDX60-201ENST00000393743 SPTBN4Q9H254 2564 aa4.76□□□□□ -1.65
DDX60-201ENST00000393743 LITAFQ99732 161 aa4.76□□□□□ -1.65
DDX60-201ENST00000393743 Q9UF83 564 aa4.76□□□□□ -1.65
DDX60-201ENST00000393743 PRO0461Q9UI25 63 aa4.76□□□□□ -1.65
DDX60-201ENST00000393743 ZNF575Q86XF7 245 aa4.75□□□□□ -1.65
DDX60-201ENST00000393743 SERTAD4-AS1Q5TG53 156 aa4.75□□□□□ -1.65
DDX60-201ENST00000393743 C15orf56Q8N910 161 aa4.75□□□□□ -1.65
DDX60-201ENST00000393743 RBM12B-AS1Q9P1G2 102 aa4.75□□□□□ -1.65
DDX60-201ENST00000393743 ANKRD17O75179 2603 aaKnown RBP4.74□□□□□ -1.65
DDX60-201ENST00000393743 C8orf17Q9NRJ1 99 aa4.74□□□□□ -1.65
DDX60-201ENST00000393743 A0A1B0GVX0 72 aa4.74□□□□□ -1.65
DDX60-201ENST00000393743 IGLV7-43P04211 117 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms