RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 PSCAO43653 123 aa8.89□□□□□ -0.99
PTN-202ENST00000393083 PPDPFQ9H3Y8 114 aa8.89□□□□□ -0.99
PTN-202ENST00000393083 TRBV30A0A0K0K1B3 111 aa8.88□□□□□ -0.99
PTN-202ENST00000393083 C9orf118A6NHY6 69 aa8.88□□□□□ -0.99
PTN-202ENST00000393083 F8WDY8 70 aa8.88□□□□□ -0.99
PTN-202ENST00000393083 LECT2O14960 151 aa8.88□□□□□ -0.99
PTN-202ENST00000393083 Q6ZRU5 148 aa8.88□□□□□ -0.99
PTN-202ENST00000393083 NAA38Q9BRA0 125 aaKnown RBP8.87□□□□□ -0.99
PTN-202ENST00000393083 BIRC6Q9NR09 4857 aa8.87□□□□□ -0.99
PTN-202ENST00000393083 A0A087WTM6 91 aa8.86□□□□□ -0.99
PTN-202ENST00000393083 LRCOL1A6NCL2 159 aa8.86□□□□□ -0.99
PTN-202ENST00000393083 H3BUT2 72 aa8.86□□□□□ -0.99
PTN-202ENST00000393083 SYCNQ0VAF6 134 aa8.86□□□□□ -0.99
PTN-202ENST00000393083 PRO1854Q9UHT4 67 aa8.86□□□□□ -0.99
PTN-202ENST00000393083 DYNC1H1Q14204 4646 aaKnown RBP8.86□□□□□ -0.99
PTN-202ENST00000393083 SND1-IT1Q9HBX3 110 aa8.86□□□□□ -0.99
PTN-202ENST00000393083 PGPEP1Q9NXJ5 209 aa8.86□□□□□ -0.99
PTN-202ENST00000393083 CARD19Q96LW7 228 aa8.85□□□□□ -0.99
PTN-202ENST00000393083 TSPAN13O95857 204 aa8.84□□□□□ -0.99
PTN-202ENST00000393083 WFDC2Q14508 124 aa8.84□□□□□ -0.99
PTN-202ENST00000393083 KRTAP10-2P60368 255 aa8.83□□□□□ -1
PTN-202ENST00000393083 LOC107984156A0A0G2JMH3 177 aa8.82□□□□□ -1
PTN-202ENST00000393083 RPL13AP40429 203 aaKnown RBP8.82□□□□□ -1
PTN-202ENST00000393083 ARL17AQ8IVW1 177 aa8.82□□□□□ -1
PTN-202ENST00000393083 DNAH5Q8TE73 4624 aa8.82□□□□□ -1
PTN-202ENST00000393083 A0A1W2PPM0 123 aa8.82□□□□□ -1
PTN-202ENST00000393083 H7C2G1 150 aa8.82□□□□□ -1
PTN-202ENST00000393083 VAMP3Q15836 100 aa8.82□□□□□ -1
PTN-202ENST00000393083 Q1RN00 199 aa8.82□□□□□ -1
PTN-202ENST00000393083 NDUFC2-KCTD14E9PQ53 114 aa8.81□□□□□ -1
PTN-202ENST00000393083 SLPIP03973 132 aa8.81□□□□□ -1
PTN-202ENST00000393083 C14orf177Q52M58 125 aa8.81□□□□□ -1
PTN-202ENST00000393083 RNF151Q2KHN1 245 aa8.8□□□□□ -1
PTN-202ENST00000393083 IGKV2-28A0A075B6P5 120 aa8.79□□□□□ -1
PTN-202ENST00000393083 IGKV2D-28P01615 120 aa8.79□□□□□ -1
PTN-202ENST00000393083 FABP2P12104 132 aa8.79□□□□□ -1
PTN-202ENST00000393083 Q8N814 137 aa8.79□□□□□ -1
PTN-202ENST00000393083 LRP1BQ9NZR2 4599 aa8.79□□□□□ -1
PTN-202ENST00000393083 TRAV13-2A0A0B4J235 113 aa8.78□□□□□ -1
PTN-202ENST00000393083 NDUFC2O95298 119 aa8.78□□□□□ -1
PTN-202ENST00000393083 FUSP35637 526 aaKnown RBP eCLIP8.78□□□□□ -1
PTN-202ENST00000393083 XAGE1AQ9HD64 81 aa8.78□□□□□ -1
PTN-202ENST00000393083 RPL18AQ02543 176 aaKnown RBP8.78□□□□□ -1
PTN-202ENST00000393083 GAGE2EQ4V326 116 aa8.78□□□□□ -1
PTN-202ENST00000393083 LINC00337Q8N6G1 96 aa8.78□□□□□ -1
PTN-202ENST00000393083 GAGE2DQ9UEU5 116 aa8.78□□□□□ -1
PTN-202ENST00000393083 TLX1NBP0CAT3 122 aa8.77□□□□□ -1.01
PTN-202ENST00000393083 PSMB2P49721 201 aa8.77□□□□□ -1.01
PTN-202ENST00000393083 Q6ZRP5 223 aa8.77□□□□□ -1.01
PTN-202ENST00000393083 SPCS1Q9Y6A9 102 aa8.77□□□□□ -1.01
PTN-202ENST00000393083 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.76□□□□□ -1.01
PTN-202ENST00000393083 C16orf90A8MZG2 172 aa8.76□□□□□ -1.01
PTN-202ENST00000393083 NCR3O14931 201 aa8.76□□□□□ -1.01
PTN-202ENST00000393083 CNBPP62633 177 aaKnown RBP8.76□□□□□ -1.01
PTN-202ENST00000393083 LYRM7Q5U5X0 104 aa8.76□□□□□ -1.01
PTN-202ENST00000393083 Q8NDZ9 215 aa8.76□□□□□ -1.01
PTN-202ENST00000393083 K7EP34 96 aa8.75□□□□□ -1.01
PTN-202ENST00000393083 OR13C6PQ8NH95 151 aa8.74□□□□□ -1.01
PTN-202ENST00000393083 LOC107984640A0A0U1RRK4 108 aa8.73□□□□□ -1.01
PTN-202ENST00000393083 GAGE10A6NGK3 116 aa8.73□□□□□ -1.01
PTN-202ENST00000393083 TRIAP1O43715 76 aa8.73□□□□□ -1.01
PTN-202ENST00000393083 LORP23490 312 aaPredicted RBP8.73□□□□□ -1.01
PTN-202ENST00000393083 PRR3P79522 188 aaKnown RBP8.73□□□□□ -1.01
PTN-202ENST00000393083 GTF2H5Q6ZYL4 71 aa8.73□□□□□ -1.01
PTN-202ENST00000393083 SCGB1C2P0DMR2 95 aa8.73□□□□□ -1.01
PTN-202ENST00000393083 C9orf129Q5T035 196 aaKnown RBP8.73□□□□□ -1.01
PTN-202ENST00000393083 IGLV5-52A0A0A0MRZ9 124 aa8.72□□□□□ -1.01
PTN-202ENST00000393083 UBE2V1Q13404 147 aa8.72□□□□□ -1.01
PTN-202ENST00000393083 VPREB1P12018 145 aa8.71□□□□□ -1.02
PTN-202ENST00000393083 GAGE2BQ13066 116 aa8.71□□□□□ -1.02
PTN-202ENST00000393083 TRBV10-2A0A0K0K1G8 114 aa8.7□□□□□ -1.02
PTN-202ENST00000393083 COX6CP09669 75 aa8.7□□□□□ -1.02
PTN-202ENST00000393083 KRTAP10-1P60331 282 aa8.69□□□□□ -1.02
PTN-202ENST00000393083 S100A7L2Q5SY68 101 aa8.69□□□□□ -1.02
PTN-202ENST00000393083 SMIM11BQ8TCY0 68 aa8.69□□□□□ -1.02
PTN-202ENST00000393083 TMEM126AQ9H061 195 aa8.69□□□□□ -1.02
PTN-202ENST00000393083 APOBP04114 4563 aaKnown RBP8.69□□□□□ -1.02
PTN-202ENST00000393083 KIAA1109Q2LD37 5005 aa8.69□□□□□ -1.02
PTN-202ENST00000393083 TCL1BO95988 128 aa8.69□□□□□ -1.02
PTN-202ENST00000393083 RPL28P46779 137 aaKnown RBP8.69□□□□□ -1.02
PTN-202ENST00000393083 TRBV20-1A0A075B6N2 111 aa8.67□□□□□ -1.02
PTN-202ENST00000393083 A0A096LNI7 61 aa8.67□□□□□ -1.02
PTN-202ENST00000393083 SERTAD4-AS1Q5TG53 156 aa8.67□□□□□ -1.02
PTN-202ENST00000393083 C9orf163Q8N9P6 203 aa8.67□□□□□ -1.02
PTN-202ENST00000393083 PLA2G2DQ9UNK4 145 aa8.67□□□□□ -1.02
PTN-202ENST00000393083 PKIGQ9Y2B9 76 aa8.67□□□□□ -1.02
PTN-202ENST00000393083 DNAH8Q96JB1 4490 aa8.67□□□□□ -1.02
PTN-202ENST00000393083 M0R378 163 aa8.66□□□□□ -1.02
PTN-202ENST00000393083 NKAPP1Q8N9T2 125 aa8.66□□□□□ -1.02
PTN-202ENST00000393083 RYR1P21817 5038 aa8.66□□□□□ -1.02
PTN-202ENST00000393083 FAM168BA1KXE4 195 aa8.65□□□□□ -1.02
PTN-202ENST00000393083 H3BMG7 143 aa8.65□□□□□ -1.02
PTN-202ENST00000393083 IGLV6-57P01721 117 aa8.65□□□□□ -1.02
PTN-202ENST00000393083 CLEC2BQ92478 149 aa8.65□□□□□ -1.02
PTN-202ENST00000393083 HSPG2P98160 4391 aa8.65□□□□□ -1.02
PTN-202ENST00000393083 IGKV2-24A0A0C4DH68 120 aa8.65□□□□□ -1.03
PTN-202ENST00000393083 TRBV10-3A0A0K0K1G6 114 aa8.65□□□□□ -1.03
PTN-202ENST00000393083 J3QL48 77 aa8.65□□□□□ -1.03
PTN-202ENST00000393083 CDK2AP2O75956 126 aa8.65□□□□□ -1.03
PTN-202ENST00000393083 ATXN8Q156A1 80 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms