RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 COX8AP10176 69 aa0.42□□□□□ -2.34
TRAJ39-201ENST00000390498 COX6B1P14854 86 aa0.42□□□□□ -2.34
TRAJ39-201ENST00000390498 HMGA1P17096 107 aaKnown RBP0.42□□□□□ -2.34
TRAJ39-201ENST00000390498 RPL38P63173 70 aaKnown RBP0.42□□□□□ -2.34
TRAJ39-201ENST00000390498 Q5VSD8 79 aa0.42□□□□□ -2.34
TRAJ39-201ENST00000390498 HEPN1Q6WQI6 88 aa0.42□□□□□ -2.34
TRAJ39-201ENST00000390498 WFDC9Q8NEX5 89 aa0.42□□□□□ -2.34
TRAJ39-201ENST00000390498 CRIPTQ9P021 101 aa0.42□□□□□ -2.34
TRAJ39-201ENST00000390498 COL14A1Q05707 1796 aaKnown RBP0.42□□□□□ -2.34
TRAJ39-201ENST00000390498 CICQ96RK0 1608 aaPredicted RBP0.42□□□□□ -2.34
TRAJ39-201ENST00000390498 EIF2AK4Q9P2K8 1649 aaKnown RBP0.42□□□□□ -2.34
TRAJ39-201ENST00000390498 FXYD6-FXYD2A0A087WZ82 144 aa0.41□□□□□ -2.34
TRAJ39-201ENST00000390498 LCE6AA0A183 80 aa0.41□□□□□ -2.34
TRAJ39-201ENST00000390498 I3L3M4 83 aa0.41□□□□□ -2.34
TRAJ39-201ENST00000390498 IFI6P09912 130 aa0.41□□□□□ -2.34
TRAJ39-201ENST00000390498 UBR3Q6ZT12 1888 aa0.41□□□□□ -2.34
TRAJ39-201ENST00000390498 MROH1Q8NDA8 1641 aa0.41□□□□□ -2.34
TRAJ39-201ENST00000390498 PLCH1Q4KWH8 1693 aa0.4□□□□□ -2.34
TRAJ39-201ENST00000390498 PREX1Q8TCU6 1659 aa0.4□□□□□ -2.34
TRAJ39-201ENST00000390498 BCORQ6W2J9 1755 aa0.4□□□□□ -2.35
TRAJ39-201ENST00000390498 EFCAB5A4FU69 1503 aa0.4□□□□□ -2.35
TRAJ39-201ENST00000390498 CPSF4LA6NMK7 179 aaKnown RBP0.4□□□□□ -2.35
TRAJ39-201ENST00000390498 NREPQ16612 68 aa0.4□□□□□ -2.35
TRAJ39-201ENST00000390498 Q5BKY6 102 aa0.4□□□□□ -2.35
TRAJ39-201ENST00000390498 KRTAP5-2Q701N4 177 aa0.4□□□□□ -2.35
TRAJ39-201ENST00000390498 DOT1LQ8TEK3 1739 aa0.4□□□□□ -2.35
TRAJ39-201ENST00000390498 MUC19Q7Z5P9 8384 aa0.4□□□□□ -2.35
TRAJ39-201ENST00000390498 MEGF8Q7Z7M0 2845 aa0.4□□□□□ -2.35
TRAJ39-201ENST00000390498 NWD1Q149M9 1564 aa0.4□□□□□ -2.35
TRAJ39-201ENST00000390498 INO80Q9ULG1 1556 aaPredicted RBP0.4□□□□□ -2.35
TRAJ39-201ENST00000390498 LMTK2Q8IWU2 1503 aa0.39□□□□□ -2.35
TRAJ39-201ENST00000390498 ASXL1Q8IXJ9 1541 aa0.39□□□□□ -2.35
TRAJ39-201ENST00000390498 ABCA9Q8IUA7 1624 aa0.39□□□□□ -2.35
TRAJ39-201ENST00000390498 ITSN1Q15811 1721 aa0.39□□□□□ -2.35
TRAJ39-201ENST00000390498 FMN2Q9NZ56 1722 aa0.39□□□□□ -2.35
TRAJ39-201ENST00000390498 PARP4Q9UKK3 1724 aaKnown RBP0.39□□□□□ -2.35
TRAJ39-201ENST00000390498 CCL22O00626 93 aa0.39□□□□□ -2.35
TRAJ39-201ENST00000390498 MRPL34Q9BQ48 92 aaKnown RBP0.39□□□□□ -2.35
TRAJ39-201ENST00000390498 CDC42BPGQ6DT37 1551 aa0.39□□□□□ -2.35
TRAJ39-201ENST00000390498 WIZO95785 1651 aa0.39□□□□□ -2.35
TRAJ39-201ENST00000390498 NHSQ6T4R5 1651 aa0.39□□□□□ -2.35
TRAJ39-201ENST00000390498 ZNF462Q96JM2 2506 aa0.38□□□□□ -2.35
TRAJ39-201ENST00000390498 ANKRD17O75179 2603 aaKnown RBP0.38□□□□□ -2.35
TRAJ39-201ENST00000390498 AHCTF1Q8WYP5 2266 aa0.38□□□□□ -2.35
TRAJ39-201ENST00000390498 H3BVH4 76 aa0.38□□□□□ -2.35
TRAJ39-201ENST00000390498 SPRR1AP35321 89 aa0.38□□□□□ -2.35
TRAJ39-201ENST00000390498 SPINK6Q6UWN8 80 aa0.38□□□□□ -2.35
TRAJ39-201ENST00000390498 COX6B2Q6YFQ2 88 aa0.38□□□□□ -2.35
TRAJ39-201ENST00000390498 KRTAP19-3Q7Z4W3 81 aa0.38□□□□□ -2.35
TRAJ39-201ENST00000390498 OTOGLQ3ZCN5 2332 aa0.38□□□□□ -2.35
TRAJ39-201ENST00000390498 TSC2P49815 1807 aa0.38□□□□□ -2.35
TRAJ39-201ENST00000390498 RICTORQ6R327 1708 aa0.38□□□□□ -2.35
TRAJ39-201ENST00000390498 NESP48681 1621 aa0.38□□□□□ -2.35
TRAJ39-201ENST00000390498 MADDQ8WXG6 1647 aa0.38□□□□□ -2.35
TRAJ39-201ENST00000390498 HMCN1Q96RW7 5635 aa0.38□□□□□ -2.35
TRAJ39-201ENST00000390498 HFM1A2PYH4 1435 aa0.38□□□□□ -2.35
TRAJ39-201ENST00000390498 A0A087WWC5 75 aa0.37□□□□□ -2.35
TRAJ39-201ENST00000390498 KRTAP5-8O75690 187 aa0.37□□□□□ -2.35
TRAJ39-201ENST00000390498 SPRR1BP22528 89 aa0.37□□□□□ -2.35
TRAJ39-201ENST00000390498 ATXN8Q156A1 80 aa0.37□□□□□ -2.35
TRAJ39-201ENST00000390498 KRTAP21-2Q3LI59 83 aa0.37□□□□□ -2.35
TRAJ39-201ENST00000390498 HILPDAQ9Y5L2 63 aa0.37□□□□□ -2.35
TRAJ39-201ENST00000390498 CCDC180Q9P1Z9 1646 aa0.37□□□□□ -2.35
TRAJ39-201ENST00000390498 TNRC6CQ9HCJ0 1690 aaKnown RBP0.37□□□□□ -2.35
TRAJ39-201ENST00000390498 RALGAPBQ86X10 1494 aa0.36□□□□□ -2.35
TRAJ39-201ENST00000390498 TTC28Q96AY4 2481 aa0.36□□□□□ -2.35
TRAJ39-201ENST00000390498 NDUFA4O00483 81 aa0.36□□□□□ -2.35
TRAJ39-201ENST00000390498 DEFB105AQ8NG35 78 aa0.36□□□□□ -2.35
TRAJ39-201ENST00000390498 FRAS1Q86XX4 4008 aa0.36□□□□□ -2.35
TRAJ39-201ENST00000390498 TIAM1Q13009 1591 aa0.36□□□□□ -2.35
TRAJ39-201ENST00000390498 DIP2AQ14689 1571 aa0.36□□□□□ -2.35
TRAJ39-201ENST00000390498 DDX60LQ5H9U9 1706 aaKnown RBP0.35□□□□□ -2.35
TRAJ39-201ENST00000390498 CACNA1HO95180 2353 aa0.35□□□□□ -2.35
TRAJ39-201ENST00000390498 SPINK4O60575 86 aa0.35□□□□□ -2.35
TRAJ39-201ENST00000390498 PRH1P02810 166 aa0.35□□□□□ -2.35
TRAJ39-201ENST00000390498 DEFB109BQ30KR1 87 aa0.35□□□□□ -2.35
TRAJ39-201ENST00000390498 GNG13Q9P2W3 67 aa0.35□□□□□ -2.35
TRAJ39-201ENST00000390498 GOLGA4Q13439 2230 aaKnown RBP0.35□□□□□ -2.35
TRAJ39-201ENST00000390498 THOC2Q8NI27 1593 aaKnown RBP0.35□□□□□ -2.35
TRAJ39-201ENST00000390498 NRAPQ86VF7 1730 aa0.35□□□□□ -2.35
TRAJ39-201ENST00000390498 ZNF469Q96JG9 3925 aaPredicted RBP0.34□□□□□ -2.35
TRAJ39-201ENST00000390498 URB1O60287 2271 aaKnown RBP0.34□□□□□ -2.35
TRAJ39-201ENST00000390498 KRTAP2-3P0C7H8 128 aa0.34□□□□□ -2.36
TRAJ39-201ENST00000390498 H1FX-AS1Q4G0G2 97 aa0.34□□□□□ -2.36
TRAJ39-201ENST00000390498 S100ZQ8WXG8 99 aa0.34□□□□□ -2.36
TRAJ39-201ENST00000390498 SMR3AQ99954 134 aa0.34□□□□□ -2.36
TRAJ39-201ENST00000390498 KRTAP2-4Q9BYR9 128 aa0.34□□□□□ -2.36
TRAJ39-201ENST00000390498 KRTAP2-1Q9BYU5 128 aa0.34□□□□□ -2.36
TRAJ39-201ENST00000390498 PIEZO2Q9H5I5 2752 aa0.34□□□□□ -2.36
TRAJ39-201ENST00000390498 CRCT1Q9UGL9 99 aa0.34□□□□□ -2.36
TRAJ39-201ENST00000390498 CDKN2A-AS1Q9UH64 79 aa0.34□□□□□ -2.36
TRAJ39-201ENST00000390498 APLNQ9ULZ1 77 aa0.34□□□□□ -2.36
TRAJ39-201ENST00000390498 RNF17Q9BXT8 1623 aaKnown RBP0.34□□□□□ -2.36
TRAJ39-201ENST00000390498 TENM1Q9UKZ4 2725 aa0.34□□□□□ -2.36
TRAJ39-201ENST00000390498 POLQO75417 2590 aa0.33□□□□□ -2.36
TRAJ39-201ENST00000390498 FBN2P35556 2912 aa0.33□□□□□ -2.36
TRAJ39-201ENST00000390498 MRPL33O75394 65 aaKnown RBP0.33□□□□□ -2.36
TRAJ39-201ENST00000390498 SPINK1P00995 79 aa0.33□□□□□ -2.36
TRAJ39-201ENST00000390498 C3orf79P0CE67 100 aa0.33□□□□□ -2.36
TRAJ39-201ENST00000390498 ENHOQ6UWT2 76 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms