RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 WFDC10AQ9H1F0 79 aa10.22□□□□□ -0.77
CTNS-202ENST00000381870 APCP25054 2843 aa10.22□□□□□ -0.77
CTNS-202ENST00000381870 C9orf66Q5T8R8 295 aa10.22□□□□□ -0.77
CTNS-202ENST00000381870 TMEM254Q8TBM7 123 aa10.22□□□□□ -0.77
CTNS-202ENST00000381870 COX17Q14061 63 aa10.21□□□□□ -0.77
CTNS-202ENST00000381870 ATP5EP56381 51 aaPredicted RBP10.2□□□□□ -0.78
CTNS-202ENST00000381870 LINC01356Q8N9X3 169 aa10.2□□□□□ -0.78
CTNS-202ENST00000381870 TLN2Q9Y4G6 2542 aa10.2□□□□□ -0.78
CTNS-202ENST00000381870 ITPR2Q14571 2701 aa10.19□□□□□ -0.78
CTNS-202ENST00000381870 NIPBLQ6KC79 2804 aaeCLIP10.19□□□□□ -0.78
CTNS-202ENST00000381870 BPY2O14599 106 aa10.19□□□□□ -0.78
CTNS-202ENST00000381870 C1orf195Q5TG92 126 aa10.19□□□□□ -0.78
CTNS-202ENST00000381870 SETXQ7Z333 2677 aaKnown RBP10.19□□□□□ -0.78
CTNS-202ENST00000381870 IGLV10-54A0A075B6I4 117 aa10.18□□□□□ -0.78
CTNS-202ENST00000381870 A0A096LPF7 62 aa10.18□□□□□ -0.78
CTNS-202ENST00000381870 PDE6GP18545 87 aa10.18□□□□□ -0.78
CTNS-202ENST00000381870 KRTAP10-9P60411 292 aa10.18□□□□□ -0.78
CTNS-202ENST00000381870 Q8N9L7 120 aa10.18□□□□□ -0.78
CTNS-202ENST00000381870 ZNF469Q96JG9 3925 aaPredicted RBP10.17□□□□□ -0.78
CTNS-202ENST00000381870 DEFB130BP0DP73 79 aa10.16□□□□□ -0.78
CTNS-202ENST00000381870 DEFB130AP0DP74 79 aa10.16□□□□□ -0.78
CTNS-202ENST00000381870 IGHV4-28A0A0C4DH34 117 aa10.16□□□□□ -0.78
CTNS-202ENST00000381870 A0A1B0GUV1 79 aa10.16□□□□□ -0.78
CTNS-202ENST00000381870 GYPEP15421 78 aa10.16□□□□□ -0.78
CTNS-202ENST00000381870 C10orf25Q5T742 122 aa10.15□□□□□ -0.78
CTNS-202ENST00000381870 NOTCH2Q04721 2471 aa10.15□□□□□ -0.78
CTNS-202ENST00000381870 IGLV6-57P01721 117 aa10.14□□□□□ -0.79
CTNS-202ENST00000381870 LINC01006Q8NI28 216 aa10.14□□□□□ -0.79
CTNS-202ENST00000381870 CHCHD10Q8WYQ3 142 aaPredicted RBP10.14□□□□□ -0.79
CTNS-202ENST00000381870 CD164L2Q6UWJ8 174 aa10.14□□□□□ -0.79
CTNS-202ENST00000381870 CSNK1G2-AS1Q8NCQ2 148 aa10.14□□□□□ -0.79
CTNS-202ENST00000381870 V9GYY9 64 aa10.14□□□□□ -0.79
CTNS-202ENST00000381870 NAV2Q8IVL1 2488 aa10.13□□□□□ -0.79
CTNS-202ENST00000381870 CCDC168Q8NDH2 2452 aa10.13□□□□□ -0.79
CTNS-202ENST00000381870 UNQ6190/PRO20217Q6UXQ8 127 aa10.13□□□□□ -0.79
CTNS-202ENST00000381870 ANKRD17O75179 2603 aaKnown RBP10.12□□□□□ -0.79
CTNS-202ENST00000381870 PRYO14603 147 aa10.12□□□□□ -0.79
CTNS-202ENST00000381870 CR1P17927 2039 aa10.12□□□□□ -0.79
CTNS-202ENST00000381870 FLNBO75369 2602 aaKnown RBP10.11□□□□□ -0.79
CTNS-202ENST00000381870 ERC2-IT1O76042 136 aa10.11□□□□□ -0.79
CTNS-202ENST00000381870 SEC61GP60059 68 aa10.11□□□□□ -0.79
CTNS-202ENST00000381870 FSHBP01225 129 aa10.11□□□□□ -0.79
CTNS-202ENST00000381870 ESRGQ1W209 222 aa10.11□□□□□ -0.79
CTNS-202ENST00000381870 FUSP35637 526 aaKnown RBP eCLIP10.1□□□□□ -0.79
CTNS-202ENST00000381870 Q6ZTC4 211 aa10.1□□□□□ -0.79
CTNS-202ENST00000381870 UNC79Q9P2D8 2635 aa10.1□□□□□ -0.79
CTNS-202ENST00000381870 OCR1Q9BZK8 76 aa10.1□□□□□ -0.79
CTNS-202ENST00000381870 IGKV4-1P06312 121 aa10.09□□□□□ -0.79
CTNS-202ENST00000381870 HIGD2AQ9BW72 106 aa10.09□□□□□ -0.79
CTNS-202ENST00000381870 IGHV4-31P0DP07 118 aa10.09□□□□□ -0.79
CTNS-202ENST00000381870 DAD1P61803 113 aa10.09□□□□□ -0.79
CTNS-202ENST00000381870 FN1P02751 2386 aaKnown RBP10.08□□□□□ -0.8
CTNS-202ENST00000381870 CCL24O00175 119 aa10.08□□□□□ -0.8
CTNS-202ENST00000381870 ANGP03950 147 aaKnown RBP10.08□□□□□ -0.8
CTNS-202ENST00000381870 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.08□□□□□ -0.8
CTNS-202ENST00000381870 REG3AQ06141 175 aa10.08□□□□□ -0.8
CTNS-202ENST00000381870 DIRC1Q969H9 104 aa10.08□□□□□ -0.8
CTNS-202ENST00000381870 H3BQ85 93 aa10.07□□□□□ -0.8
CTNS-202ENST00000381870 DSCR9P59020 149 aa10.06□□□□□ -0.8
CTNS-202ENST00000381870 SPAG11BQ08648 103 aa10.06□□□□□ -0.8
CTNS-202ENST00000381870 C19orf73Q9NVV2 129 aa10.06□□□□□ -0.8
CTNS-202ENST00000381870 CYSRT1A8MQ03 144 aa10.06□□□□□ -0.8
CTNS-202ENST00000381870 PDZD2O15018 2839 aa10.05□□□□□ -0.8
CTNS-202ENST00000381870 COX7BP24311 80 aa10.05□□□□□ -0.8
CTNS-202ENST00000381870 XAGE1AQ9HD64 81 aa10.05□□□□□ -0.8
CTNS-202ENST00000381870 TEX15Q9BXT5 2789 aa10.05□□□□□ -0.8
CTNS-202ENST00000381870 ZNF73O43830 326 aaPredicted RBP10.05□□□□□ -0.8
CTNS-202ENST00000381870 LRCOL1A6NCL2 159 aa10.04□□□□□ -0.8
CTNS-202ENST00000381870 NBEAL2Q6ZNJ1 2754 aa10.03□□□□□ -0.8
CTNS-202ENST00000381870 NF1P21359 2839 aa10.03□□□□□ -0.8
CTNS-202ENST00000381870 SETD2Q9BYW2 2564 aaPredicted RBP10.02□□□□□ -0.8
CTNS-202ENST00000381870 ELOF1P60002 83 aaKnown RBP10.02□□□□□ -0.81
CTNS-202ENST00000381870 A0A0J9YWU9 116 aa10.01□□□□□ -0.81
CTNS-202ENST00000381870 IGHV4-30-4P0DP06 118 aa10.01□□□□□ -0.81
CTNS-202ENST00000381870 LINC00612Q8N6U2 182 aa10.01□□□□□ -0.81
CTNS-202ENST00000381870 PRO0255Q9UI72 69 aa10.01□□□□□ -0.81
CTNS-202ENST00000381870 C3orf84H3BNL1 204 aa10□□□□□ -0.81
CTNS-202ENST00000381870 ESM1Q9NQ30 184 aa10□□□□□ -0.81
CTNS-202ENST00000381870 KLK12Q9UKR0 248 aa10□□□□□ -0.81
CTNS-202ENST00000381870 FAM30AQ9NZY2 134 aa9.99□□□□□ -0.81
CTNS-202ENST00000381870 CELA1Q9UNI1 258 aa9.99□□□□□ -0.81
CTNS-202ENST00000381870 ITPR3Q14573 2671 aa9.99□□□□□ -0.81
CTNS-202ENST00000381870 CMC4P56277 68 aaPredicted RBP9.99□□□□□ -0.81
CTNS-202ENST00000381870 ACANP16112 2415 aa9.98□□□□□ -0.81
CTNS-202ENST00000381870 hDV103S1A0JD37 113 aa9.98□□□□□ -0.81
CTNS-202ENST00000381870 C6orf48Q9UBA6 75 aa9.97□□□□□ -0.81
CTNS-202ENST00000381870 SMIM29Q86T20 159 aa9.96□□□□□ -0.81
CTNS-202ENST00000381870 Q6ZRP5 223 aa9.96□□□□□ -0.82
CTNS-202ENST00000381870 IGLV1-51P01701 117 aa9.95□□□□□ -0.82
CTNS-202ENST00000381870 DEFB113Q30KQ7 82 aa9.95□□□□□ -0.82
CTNS-202ENST00000381870 OTOGQ6ZRI0 2925 aa9.95□□□□□ -0.82
CTNS-202ENST00000381870 FLNAP21333 2647 aaKnown RBP9.95□□□□□ -0.82
CTNS-202ENST00000381870 BAHCC1Q9P281 2608 aa9.95□□□□□ -0.82
CTNS-202ENST00000381870 PRR15Q8IV56 129 aa9.95□□□□□ -0.82
CTNS-202ENST00000381870 SONP18583 2426 aaKnown RBP9.95□□□□□ -0.82
CTNS-202ENST00000381870 HIGD2BQ4VC39 106 aa9.94□□□□□ -0.82
CTNS-202ENST00000381870 C1orf64Q8NEQ6 169 aa9.94□□□□□ -0.82
CTNS-202ENST00000381870 LINC00528Q8N1L1 170 aa9.93□□□□□ -0.82
CTNS-202ENST00000381870 DEFB4AO15263 64 aa9.92□□□□□ -0.82
CTNS-202ENST00000381870 GVQW2A0A096LPI5 108 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms