RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 ODF3BA8MYP8 253 aa6.52□□□□□ -1.37
PTPRA-204ENST00000380393 ZFP36P26651 326 aaKnown RBP6.52□□□□□ -1.37
PTPRA-204ENST00000380393 SPINK13Q1W4C9 94 aa6.52□□□□□ -1.37
PTPRA-204ENST00000380393 NTM-AS1Q6ZSK4 140 aa6.52□□□□□ -1.37
PTPRA-204ENST00000380393 CUBNO60494 3623 aa6.52□□□□□ -1.37
PTPRA-204ENST00000380393 ABCA2Q9BZC7 2435 aa6.52□□□□□ -1.37
PTPRA-204ENST00000380393 IGHV3-16A0A0C4DH30 117 aa6.51□□□□□ -1.37
PTPRA-204ENST00000380393 MINOS1Q5TGZ0 78 aa6.51□□□□□ -1.37
PTPRA-204ENST00000380393 MTORP42345 2549 aa6.51□□□□□ -1.37
PTPRA-204ENST00000380393 TOMM7Q9P0U1 55 aa6.51□□□□□ -1.37
PTPRA-204ENST00000380393 COX7B2Q8TF08 81 aa6.51□□□□□ -1.37
PTPRA-204ENST00000380393 PRM2P04554 102 aa6.5□□□□□ -1.37
PTPRA-204ENST00000380393 C19orf54Q5BKX5 351 aa6.5□□□□□ -1.37
PTPRA-204ENST00000380393 J3QKU1 62 aa6.5□□□□□ -1.37
PTPRA-204ENST00000380393 Q8N9L7 120 aa6.5□□□□□ -1.37
PTPRA-204ENST00000380393 PDZD2O15018 2839 aa6.5□□□□□ -1.37
PTPRA-204ENST00000380393 LOC110117498A0A087WWA1 95 aa6.5□□□□□ -1.37
PTPRA-204ENST00000380393 VPREB1P12018 145 aa6.5□□□□□ -1.37
PTPRA-204ENST00000380393 NKAPP1Q8N9T2 125 aa6.5□□□□□ -1.37
PTPRA-204ENST00000380393 CCL19Q99731 98 aa6.5□□□□□ -1.37
PTPRA-204ENST00000380393 SETD2Q9BYW2 2564 aaPredicted RBP6.5□□□□□ -1.37
PTPRA-204ENST00000380393 SPATA3Q8NHX4 192 aa6.49□□□□□ -1.37
PTPRA-204ENST00000380393 NF1P21359 2839 aa6.49□□□□□ -1.37
PTPRA-204ENST00000380393 TRBV6-8A0A0A6YYG3 113 aa6.49□□□□□ -1.37
PTPRA-204ENST00000380393 KLLNB2CW77 178 aa6.49□□□□□ -1.37
PTPRA-204ENST00000380393 BRD3OSQ6XYD6 125 aa6.49□□□□□ -1.37
PTPRA-204ENST00000380393 AKAP9Q99996 3911 aa6.49□□□□□ -1.37
PTPRA-204ENST00000380393 A6NED7 52 aa6.48□□□□□ -1.37
PTPRA-204ENST00000380393 PRR15LQ9BU68 103 aa6.48□□□□□ -1.37
PTPRA-204ENST00000380393 MINOS1-NBL1R4GNA1 71 aa6.48□□□□□ -1.37
PTPRA-204ENST00000380393 CCL24O00175 119 aa6.48□□□□□ -1.37
PTPRA-204ENST00000380393 TRBV6-4A0A1B0GX49 114 aa6.47□□□□□ -1.37
PTPRA-204ENST00000380393 IGHV4-30-2A0A087WSY4 118 aa6.46□□□□□ -1.37
PTPRA-204ENST00000380393 LINC01006Q8NI28 216 aa6.46□□□□□ -1.37
PTPRA-204ENST00000380393 OTOGQ6ZRI0 2925 aa6.46□□□□□ -1.38
PTPRA-204ENST00000380393 IGHV4-61A0A0C4DH41 118 aa6.45□□□□□ -1.38
PTPRA-204ENST00000380393 IGKV3OR2-268A0A0C4DH90 116 aa6.45□□□□□ -1.38
PTPRA-204ENST00000380393 NDUFA4O00483 81 aa6.45□□□□□ -1.38
PTPRA-204ENST00000380393 CELA1Q9UNI1 258 aa6.45□□□□□ -1.38
PTPRA-204ENST00000380393 A0A096LNT2 108 aa6.45□□□□□ -1.38
PTPRA-204ENST00000380393 LY6G6DO95868 133 aa6.45□□□□□ -1.38
PTPRA-204ENST00000380393 FAM30AQ9NZY2 134 aa6.45□□□□□ -1.38
PTPRA-204ENST00000380393 PDE6GP18545 87 aa6.45□□□□□ -1.38
PTPRA-204ENST00000380393 C5orf56Q8N8D9 126 aa6.45□□□□□ -1.38
PTPRA-204ENST00000380393 SERTAD4-AS1Q5TG53 156 aa6.43□□□□□ -1.38
PTPRA-204ENST00000380393 LIMD2Q9BT23 127 aa6.43□□□□□ -1.38
PTPRA-204ENST00000380393 BAHCC1Q9P281 2608 aa6.43□□□□□ -1.38
PTPRA-204ENST00000380393 IGKV4-1P06312 121 aa6.43□□□□□ -1.38
PTPRA-204ENST00000380393 MUC7Q8TAX7 377 aa6.43□□□□□ -1.38
PTPRA-204ENST00000380393 TEP1Q99973 2627 aaKnown RBP6.43□□□□□ -1.38
PTPRA-204ENST00000380393 LMO4P61968 165 aa6.43□□□□□ -1.38
PTPRA-204ENST00000380393 CYP4F30PQ9H0H9 118 aa6.42□□□□□ -1.38
PTPRA-204ENST00000380393 WNK1Q9H4A3 2382 aa6.41□□□□□ -1.38
PTPRA-204ENST00000380393 C9orf66Q5T8R8 295 aa6.41□□□□□ -1.38
PTPRA-204ENST00000380393 Q6ZSN1 163 aa6.41□□□□□ -1.38
PTPRA-204ENST00000380393 NIPBLQ6KC79 2804 aaeCLIP6.41□□□□□ -1.38
PTPRA-204ENST00000380393 K7EQD1 137 aa6.41□□□□□ -1.38
PTPRA-204ENST00000380393 PRR3P79522 188 aaKnown RBP6.41□□□□□ -1.38
PTPRA-204ENST00000380393 C6orf99Q4VX62 202 aa6.41□□□□□ -1.38
PTPRA-204ENST00000380393 OXLD1Q5BKU9 147 aa6.41□□□□□ -1.38
PTPRA-204ENST00000380393 Q8N9P0 234 aaPredicted RBP6.4□□□□□ -1.38
PTPRA-204ENST00000380393 LINC01554Q52M75 96 aa6.4□□□□□ -1.38
PTPRA-204ENST00000380393 H3BUX3 64 aa6.4□□□□□ -1.39
PTPRA-204ENST00000380393 JMJD1CQ15652 2540 aa6.39□□□□□ -1.39
PTPRA-204ENST00000380393 IGLV4-60A0A075B6I1 120 aa6.39□□□□□ -1.39
PTPRA-204ENST00000380393 IGHV3-53P01767 116 aa6.39□□□□□ -1.39
PTPRA-204ENST00000380393 SMIM29Q86T20 159 aa6.39□□□□□ -1.39
PTPRA-204ENST00000380393 PRAC1Q96KF2 57 aa6.39□□□□□ -1.39
PTPRA-204ENST00000380393 CDC42SE1Q9NRR8 79 aa6.39□□□□□ -1.39
PTPRA-204ENST00000380393 HIVEP1P15822 2718 aa6.39□□□□□ -1.39
PTPRA-204ENST00000380393 MOBPQ13875 183 aa6.38□□□□□ -1.39
PTPRA-204ENST00000380393 LINC00575Q6W349 94 aa6.38□□□□□ -1.39
PTPRA-204ENST00000380393 C10orf99Q6UWK7 81 aa6.38□□□□□ -1.39
PTPRA-204ENST00000380393 USMG5Q96IX5 58 aa6.37□□□□□ -1.39
PTPRA-204ENST00000380393 LINC00313P59037 77 aa6.37□□□□□ -1.39
PTPRA-204ENST00000380393 DEFB113Q30KQ7 82 aa6.37□□□□□ -1.39
PTPRA-204ENST00000380393 Q6ZQY7 126 aa6.37□□□□□ -1.39
PTPRA-204ENST00000380393 Q75L30 129 aa6.37□□□□□ -1.39
PTPRA-204ENST00000380393 LINC00612Q8N6U2 182 aa6.37□□□□□ -1.39
PTPRA-204ENST00000380393 C9orf116Q5BN46 136 aaPredicted RBP6.37□□□□□ -1.39
PTPRA-204ENST00000380393 C10orf25Q5T742 122 aa6.37□□□□□ -1.39
PTPRA-204ENST00000380393 IGHV4-38-2P0DP08 117 aa6.36□□□□□ -1.39
PTPRA-204ENST00000380393 DEFB131AP59861 70 aa6.36□□□□□ -1.39
PTPRA-204ENST00000380393 ZCCHC13Q8WW36 166 aaKnown RBP6.36□□□□□ -1.39
PTPRA-204ENST00000380393 CDC42SE2Q9NRR3 84 aa6.36□□□□□ -1.39
PTPRA-204ENST00000380393 FN1P02751 2386 aaKnown RBP6.36□□□□□ -1.39
PTPRA-204ENST00000380393 A8MTW9 85 aa6.36□□□□□ -1.39
PTPRA-204ENST00000380393 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.36□□□□□ -1.39
PTPRA-204ENST00000380393 B9D2Q9BPU9 175 aa6.36□□□□□ -1.39
PTPRA-204ENST00000380393 KRTAP1-3Q8IUG1 177 aa6.35□□□□□ -1.39
PTPRA-204ENST00000380393 CR1P17927 2039 aa6.34□□□□□ -1.39
PTPRA-204ENST00000380393 SMR3AQ99954 134 aa6.34□□□□□ -1.39
PTPRA-204ENST00000380393 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.34□□□□□ -1.39
PTPRA-204ENST00000380393 LCE6AA0A183 80 aa6.34□□□□□ -1.39
PTPRA-204ENST00000380393 HIVEP2P31629 2446 aa6.34□□□□□ -1.39
PTPRA-204ENST00000380393 IGHV4-31P0DP07 118 aa6.33□□□□□ -1.4
PTPRA-204ENST00000380393 LINC00208Q96KT6 92 aa6.33□□□□□ -1.4
PTPRA-204ENST00000380393 TRGV2A0A075B6R0 118 aa6.33□□□□□ -1.4
PTPRA-204ENST00000380393 MSMBP08118 114 aa6.33□□□□□ -1.4
PTPRA-204ENST00000380393 F8P00451 2351 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms