RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 ANGP03950 147 aaKnown RBP8.28□□□□□ -1.08
NPHP4-202ENST00000378161 C4orf3Q8WVX3 66 aa8.28□□□□□ -1.08
NPHP4-202ENST00000378161 SMIM29Q86T20 159 aa8.27□□□□□ -1.08
NPHP4-202ENST00000378161 RETNLBQ9BQ08 111 aa8.27□□□□□ -1.08
NPHP4-202ENST00000378161 IGLV5-45A0A087WSX0 123 aa8.27□□□□□ -1.09
NPHP4-202ENST00000378161 DSPP15924 2871 aaKnown RBP8.27□□□□□ -1.09
NPHP4-202ENST00000378161 LINC01554Q52M75 96 aa8.27□□□□□ -1.09
NPHP4-202ENST00000378161 CLPSL2Q6UWE3 100 aa8.27□□□□□ -1.09
NPHP4-202ENST00000378161 SPATA3Q8NHX4 192 aa8.27□□□□□ -1.09
NPHP4-202ENST00000378161 IGKV2-28A0A075B6P5 120 aa8.26□□□□□ -1.09
NPHP4-202ENST00000378161 IGKV2D-28P01615 120 aa8.26□□□□□ -1.09
NPHP4-202ENST00000378161 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.26□□□□□ -1.09
NPHP4-202ENST00000378161 LINC00575Q6W349 94 aa8.26□□□□□ -1.09
NPHP4-202ENST00000378161 MAP1AP78559 2803 aaPredicted RBP8.26□□□□□ -1.09
NPHP4-202ENST00000378161 A0A096LPF7 62 aa8.25□□□□□ -1.09
NPHP4-202ENST00000378161 GYPEP15421 78 aa8.25□□□□□ -1.09
NPHP4-202ENST00000378161 DEFB113Q30KQ7 82 aa8.24□□□□□ -1.09
NPHP4-202ENST00000378161 CENPEQ02224 2701 aa8.24□□□□□ -1.09
NPHP4-202ENST00000378161 Q6ZTC4 211 aa8.24□□□□□ -1.09
NPHP4-202ENST00000378161 C10orf99Q6UWK7 81 aa8.24□□□□□ -1.09
NPHP4-202ENST00000378161 CDC42SE1Q9NRR8 79 aa8.24□□□□□ -1.09
NPHP4-202ENST00000378161 ACANP16112 2415 aa8.24□□□□□ -1.09
NPHP4-202ENST00000378161 DNAJC9-AS1A6NH13 148 aa8.24□□□□□ -1.09
NPHP4-202ENST00000378161 C16orf90A8MZG2 172 aa8.24□□□□□ -1.09
NPHP4-202ENST00000378161 DEFB114Q30KQ6 69 aa8.23□□□□□ -1.09
NPHP4-202ENST00000378161 FRYQ5TBA9 3013 aa8.23□□□□□ -1.09
NPHP4-202ENST00000378161 LOC101927531A0A1B0GV80 90 aa8.23□□□□□ -1.09
NPHP4-202ENST00000378161 PHF5AQ7RTV0 110 aaKnown RBP8.23□□□□□ -1.09
NPHP4-202ENST00000378161 LINC01006Q8NI28 216 aa8.23□□□□□ -1.09
NPHP4-202ENST00000378161 NBEAQ8NFP9 2946 aa8.23□□□□□ -1.09
NPHP4-202ENST00000378161 PRR3P79522 188 aaKnown RBP8.22□□□□□ -1.09
NPHP4-202ENST00000378161 Q6YL49 198 aa8.22□□□□□ -1.09
NPHP4-202ENST00000378161 CDC42SE2Q9NRR3 84 aa8.22□□□□□ -1.09
NPHP4-202ENST00000378161 BOD1L1Q8NFC6 3051 aa8.22□□□□□ -1.09
NPHP4-202ENST00000378161 WFDC13Q8IUB5 93 aa8.22□□□□□ -1.09
NPHP4-202ENST00000378161 C22orf24Q9Y442 160 aa8.22□□□□□ -1.09
NPHP4-202ENST00000378161 FLNBO75369 2602 aaKnown RBP8.21□□□□□ -1.09
NPHP4-202ENST00000378161 UBE2DNLQ8IWF7 75 aa8.21□□□□□ -1.1
NPHP4-202ENST00000378161 ZNF575Q86XF7 245 aa8.21□□□□□ -1.1
NPHP4-202ENST00000378161 WFDC10BQ8IUB3 73 aa8.2□□□□□ -1.1
NPHP4-202ENST00000378161 A0A1W2PPR1 153 aa8.19□□□□□ -1.1
NPHP4-202ENST00000378161 IGLV10-54A0A075B6I4 117 aa8.18□□□□□ -1.1
NPHP4-202ENST00000378161 ELOF1P60002 83 aaKnown RBP8.18□□□□□ -1.1
NPHP4-202ENST00000378161 SPAG11AQ6PDA7 123 aa8.18□□□□□ -1.1
NPHP4-202ENST00000378161 Q5VV11 94 aa8.18□□□□□ -1.1
NPHP4-202ENST00000378161 PRR26Q8N8Z3 221 aa8.17□□□□□ -1.1
NPHP4-202ENST00000378161 PRO0255Q9UI72 69 aa8.17□□□□□ -1.1
NPHP4-202ENST00000378161 OCR1Q9BZK8 76 aa8.16□□□□□ -1.1
NPHP4-202ENST00000378161 ZNF702PQ9H963 129 aa8.16□□□□□ -1.1
NPHP4-202ENST00000378161 C10orf25Q5T742 122 aa8.15□□□□□ -1.1
NPHP4-202ENST00000378161 FSHBP01225 129 aa8.15□□□□□ -1.11
NPHP4-202ENST00000378161 IGHV4-31P0DP07 118 aa8.15□□□□□ -1.11
NPHP4-202ENST00000378161 A0A0J9YWU9 116 aa8.13□□□□□ -1.11
NPHP4-202ENST00000378161 A8MTW9 85 aa8.13□□□□□ -1.11
NPHP4-202ENST00000378161 H0Y9P7 68 aa8.13□□□□□ -1.11
NPHP4-202ENST00000378161 COX17Q14061 63 aa8.13□□□□□ -1.11
NPHP4-202ENST00000378161 IGKV4-1P06312 121 aa8.13□□□□□ -1.11
NPHP4-202ENST00000378161 SPART-AS1P0CW21 52 aa8.13□□□□□ -1.11
NPHP4-202ENST00000378161 KLK12Q9UKR0 248 aa8.13□□□□□ -1.11
NPHP4-202ENST00000378161 Q8IZM0 81 aa8.12□□□□□ -1.11
NPHP4-202ENST00000378161 ZNF292O60281 2723 aa8.12□□□□□ -1.11
NPHP4-202ENST00000378161 C9orf66Q5T8R8 295 aa8.12□□□□□ -1.11
NPHP4-202ENST00000378161 Q75L30 129 aa8.11□□□□□ -1.11
NPHP4-202ENST00000378161 CAMK2N2Q96S95 79 aa8.11□□□□□ -1.11
NPHP4-202ENST00000378161 PRAC1Q96KF2 57 aa8.11□□□□□ -1.11
NPHP4-202ENST00000378161 LINC00167Q96N53 147 aa8.11□□□□□ -1.11
NPHP4-202ENST00000378161 LY6G6DO95868 133 aa8.11□□□□□ -1.11
NPHP4-202ENST00000378161 KLK9Q2XQG4 91 aa8.11□□□□□ -1.11
NPHP4-202ENST00000378161 C18orf65Q6ZTR6 163 aa8.09□□□□□ -1.11
NPHP4-202ENST00000378161 M0R2N4 97 aa8.09□□□□□ -1.11
NPHP4-202ENST00000378161 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.09□□□□□ -1.11
NPHP4-202ENST00000378161 Q8N9P0 234 aaPredicted RBP8.09□□□□□ -1.11
NPHP4-202ENST00000378161 LINC00313P59037 77 aa8.08□□□□□ -1.12
NPHP4-202ENST00000378161 ANKRD17O75179 2603 aaKnown RBP8.08□□□□□ -1.12
NPHP4-202ENST00000378161 Q6ZSN1 163 aa8.08□□□□□ -1.12
NPHP4-202ENST00000378161 MUC4Q99102 2169 aa8.08□□□□□ -1.12
NPHP4-202ENST00000378161 DEFB135Q30KP9 77 aa8.08□□□□□ -1.12
NPHP4-202ENST00000378161 COA5Q86WW8 74 aa8.08□□□□□ -1.12
NPHP4-202ENST00000378161 ODF3L2Q3SX64 289 aa8.07□□□□□ -1.12
NPHP4-202ENST00000378161 REG3AQ06141 175 aa8.07□□□□□ -1.12
NPHP4-202ENST00000378161 CHCHD10Q8WYQ3 142 aaPredicted RBP8.07□□□□□ -1.12
NPHP4-202ENST00000378161 LINC00959A0A1B0GUT2 108 aa8.07□□□□□ -1.12
NPHP4-202ENST00000378161 IGLV4-60A0A075B6I1 120 aa8.06□□□□□ -1.12
NPHP4-202ENST00000378161 H3BPC8 53 aa8.06□□□□□ -1.12
NPHP4-202ENST00000378161 CDK2AP2O75956 126 aa8.06□□□□□ -1.12
NPHP4-202ENST00000378161 HECTD1Q9ULT8 2610 aa8.06□□□□□ -1.12
NPHP4-202ENST00000378161 IGKV2D-24A0A075B6R9 120 aa8.06□□□□□ -1.12
NPHP4-202ENST00000378161 AKAP13Q12802 2813 aa8.06□□□□□ -1.12
NPHP4-202ENST00000378161 A6NN06 94 aa8.06□□□□□ -1.12
NPHP4-202ENST00000378161 LOC100131303A0A0U1RQF7 123 aa8.05□□□□□ -1.12
NPHP4-202ENST00000378161 DEFB4AO15263 64 aa8.05□□□□□ -1.12
NPHP4-202ENST00000378161 DEFB116Q30KQ4 102 aa8.04□□□□□ -1.12
NPHP4-202ENST00000378161 XAGE1AQ9HD64 81 aa8.04□□□□□ -1.12
NPHP4-202ENST00000378161 MOBPQ13875 183 aa8.04□□□□□ -1.12
NPHP4-202ENST00000378161 PCOTHQ58A44 107 aa8.04□□□□□ -1.12
NPHP4-202ENST00000378161 COL27A1Q8IZC6 1860 aaPredicted RBP8.04□□□□□ -1.12
NPHP4-202ENST00000378161 MUC3AQ02505 3323 aa8.03□□□□□ -1.12
NPHP4-202ENST00000378161 KRTAP10-9P60411 292 aa8.03□□□□□ -1.12
NPHP4-202ENST00000378161 LOC400499M0QZD8 3231 aa8.02□□□□□ -1.12
NPHP4-202ENST00000378161 IGHV3OR16-9A0A0B4J2B5 98 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 201.5 ms