RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 EDN2P20800 178 aa6.02□□□□□ -1.45
VPS36-201ENST00000378060 FAM19A1Q7Z5A9 133 aa6.02□□□□□ -1.45
VPS36-201ENST00000378060 Q8N814 137 aa6.02□□□□□ -1.45
VPS36-201ENST00000378060 COX6A2Q02221 97 aa6.02□□□□□ -1.45
VPS36-201ENST00000378060 WFDC10AQ9H1F0 79 aa6.02□□□□□ -1.45
VPS36-201ENST00000378060 SMR3AQ99954 134 aa6.01□□□□□ -1.45
VPS36-201ENST00000378060 LINC00694P0DN24 101 aa6.01□□□□□ -1.45
VPS36-201ENST00000378060 KPRPQ5T749 579 aaPredicted RBP6.01□□□□□ -1.45
VPS36-201ENST00000378060 CDIP1Q9H305 208 aa6.01□□□□□ -1.45
VPS36-201ENST00000378060 EGFEM1PQ0D2K5 195 aa6□□□□□ -1.45
VPS36-201ENST00000378060 MPLKIPQ8TAP9 179 aa6□□□□□ -1.45
VPS36-201ENST00000378060 SMIM26A0A096LP01 95 aa6□□□□□ -1.45
VPS36-201ENST00000378060 C3orf84H3BNL1 204 aa6□□□□□ -1.45
VPS36-201ENST00000378060 IGLV1-51P01701 117 aa6□□□□□ -1.45
VPS36-201ENST00000378060 IL17DQ8TAD2 202 aa6□□□□□ -1.45
VPS36-201ENST00000378060 LINC01561Q8N1V8 128 aa6□□□□□ -1.45
VPS36-201ENST00000378060 A0A096LNT2 108 aa5.99□□□□□ -1.45
VPS36-201ENST00000378060 C4orf48Q5BLP8 95 aa5.99□□□□□ -1.45
VPS36-201ENST00000378060 SNURFQ9Y675 71 aa5.99□□□□□ -1.45
VPS36-201ENST00000378060 TRAV10A0A0B4J240 114 aa5.99□□□□□ -1.45
VPS36-201ENST00000378060 A0A1B0GUV1 79 aa5.99□□□□□ -1.45
VPS36-201ENST00000378060 LINC00315P59091 139 aa5.99□□□□□ -1.45
VPS36-201ENST00000378060 IGLV4-60A0A075B6I1 120 aa5.99□□□□□ -1.45
VPS36-201ENST00000378060 IGKV4-1P06312 121 aa5.99□□□□□ -1.45
VPS36-201ENST00000378060 UNQ6190/PRO20217Q6UXQ8 127 aa5.99□□□□□ -1.45
VPS36-201ENST00000378060 TRBV7-7A0A0K0K1E9 115 aa5.98□□□□□ -1.45
VPS36-201ENST00000378060 IGKV2-28A0A075B6P5 120 aa5.98□□□□□ -1.45
VPS36-201ENST00000378060 IGKV2D-28P01615 120 aa5.98□□□□□ -1.45
VPS36-201ENST00000378060 FHL2Q14192 279 aa5.98□□□□□ -1.45
VPS36-201ENST00000378060 NSD1Q96L73 2696 aaPredicted RBP5.98□□□□□ -1.45
VPS36-201ENST00000378060 IGLV5-39A0A0G2JS06 123 aa5.98□□□□□ -1.45
VPS36-201ENST00000378060 FAM19A5Q7Z5A7 132 aaPredicted RBP5.98□□□□□ -1.45
VPS36-201ENST00000378060 A0A087WYN8 130 aa5.98□□□□□ -1.45
VPS36-201ENST00000378060 SHISA2Q6UWI4 295 aa5.97□□□□□ -1.45
VPS36-201ENST00000378060 Q6ZSN1 163 aa5.97□□□□□ -1.45
VPS36-201ENST00000378060 FAM19A4Q96LR4 140 aa5.97□□□□□ -1.45
VPS36-201ENST00000378060 PRO0461Q9UI25 63 aa5.97□□□□□ -1.45
VPS36-201ENST00000378060 SERP1Q9Y6X1 66 aa5.97□□□□□ -1.45
VPS36-201ENST00000378060 INAFM1C9JVW0 142 aa5.96□□□□□ -1.45
VPS36-201ENST00000378060 LOC107984640A0A0U1RRK4 108 aa5.96□□□□□ -1.46
VPS36-201ENST00000378060 A0A087WVE0 104 aa5.96□□□□□ -1.46
VPS36-201ENST00000378060 TRBV10-3A0A0K0K1G6 114 aa5.96□□□□□ -1.46
VPS36-201ENST00000378060 MRPL55Q7Z7F7 128 aaKnown RBP5.96□□□□□ -1.46
VPS36-201ENST00000378060 F8P00451 2351 aa5.96□□□□□ -1.46
VPS36-201ENST00000378060 A0A096LNI7 61 aa5.96□□□□□ -1.46
VPS36-201ENST00000378060 SMCPP49901 116 aaPredicted RBP5.95□□□□□ -1.46
VPS36-201ENST00000378060 WFDC10BQ8IUB3 73 aa5.95□□□□□ -1.46
VPS36-201ENST00000378060 F8WDY8 70 aa5.95□□□□□ -1.46
VPS36-201ENST00000378060 SEC61GP60059 68 aa5.94□□□□□ -1.46
VPS36-201ENST00000378060 SBSPONQ8IVN8 264 aa5.94□□□□□ -1.46
VPS36-201ENST00000378060 LINC00337Q8N6G1 96 aa5.94□□□□□ -1.46
VPS36-201ENST00000378060 SPTSSBQ8NFR3 76 aa5.94□□□□□ -1.46
VPS36-201ENST00000378060 C9orf116Q5BN46 136 aaPredicted RBP5.94□□□□□ -1.46
VPS36-201ENST00000378060 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.94□□□□□ -1.46
VPS36-201ENST00000378060 LINC00846Q9NV44 126 aa5.94□□□□□ -1.46
VPS36-201ENST00000378060 C11orf72Q8NBR9 251 aa5.94□□□□□ -1.46
VPS36-201ENST00000378060 IGLV5-45A0A087WSX0 123 aa5.93□□□□□ -1.46
VPS36-201ENST00000378060 WFDC13Q8IUB5 93 aa5.93□□□□□ -1.46
VPS36-201ENST00000378060 Q8N3U1 123 aa5.93□□□□□ -1.46
VPS36-201ENST00000378060 MUC4Q99102 2169 aa5.93□□□□□ -1.46
VPS36-201ENST00000378060 LY6G6DO95868 133 aa5.93□□□□□ -1.46
VPS36-201ENST00000378060 PRR3P79522 188 aaKnown RBP5.93□□□□□ -1.46
VPS36-201ENST00000378060 KRTAP1-1Q07627 177 aa5.93□□□□□ -1.46
VPS36-201ENST00000378060 KLK9Q2XQG4 91 aa5.93□□□□□ -1.46
VPS36-201ENST00000378060 LINC00575Q6W349 94 aa5.93□□□□□ -1.46
VPS36-201ENST00000378060 C16orf95Q9H693 158 aa5.93□□□□□ -1.46
VPS36-201ENST00000378060 IGHV3OR16-9A0A0B4J2B5 98 aa5.92□□□□□ -1.46
VPS36-201ENST00000378060 IGHV4-30-4P0DP06 118 aa5.92□□□□□ -1.46
VPS36-201ENST00000378060 C1orf137Q5JT78 98 aa5.92□□□□□ -1.46
VPS36-201ENST00000378060 A0A0U1RQV1 116 aa5.92□□□□□ -1.46
VPS36-201ENST00000378060 ZNF706Q9Y5V0 76 aaPredicted RBP5.92□□□□□ -1.46
VPS36-201ENST00000378060 C2orf48Q96LS8 159 aa5.91□□□□□ -1.46
VPS36-201ENST00000378060 RPL37AP8A6NKH3 93 aa5.91□□□□□ -1.46
VPS36-201ENST00000378060 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.91□□□□□ -1.46
VPS36-201ENST00000378060 Q6ZVQ6 151 aa5.9□□□□□ -1.46
VPS36-201ENST00000378060 BCE1O60756 84 aa5.9□□□□□ -1.46
VPS36-201ENST00000378060 HRCT1Q6UXD1 115 aa5.9□□□□□ -1.46
VPS36-201ENST00000378060 SVIPQ8NHG7 77 aa5.9□□□□□ -1.46
VPS36-201ENST00000378060 Q8N9L7 120 aa5.9□□□□□ -1.47
VPS36-201ENST00000378060 LINC00474Q9P2X8 69 aa5.9□□□□□ -1.47
VPS36-201ENST00000378060 TENM1Q9UKZ4 2725 aa5.9□□□□□ -1.47
VPS36-201ENST00000378060 CASC2Q6XLA1 102 aa5.9□□□□□ -1.47
VPS36-201ENST00000378060 Q8N2B8 174 aa5.9□□□□□ -1.47
VPS36-201ENST00000378060 PRYO14603 147 aa5.89□□□□□ -1.47
VPS36-201ENST00000378060 CXCL6P80162 114 aa5.89□□□□□ -1.47
VPS36-201ENST00000378060 FAM30AQ9NZY2 134 aa5.89□□□□□ -1.47
VPS36-201ENST00000378060 CELA1Q9UNI1 258 aa5.89□□□□□ -1.47
VPS36-201ENST00000378060 CRYGAP11844 174 aa5.88□□□□□ -1.47
VPS36-201ENST00000378060 PRR15LQ9BU68 103 aa5.88□□□□□ -1.47
VPS36-201ENST00000378060 PPDPFQ9H3Y8 114 aa5.88□□□□□ -1.47
VPS36-201ENST00000378060 FBN1P35555 2871 aaKnown RBP5.88□□□□□ -1.47
VPS36-201ENST00000378060 LINC01547P58512 204 aaPredicted RBP5.88□□□□□ -1.47
VPS36-201ENST00000378060 PRR4Q16378 134 aa5.88□□□□□ -1.47
VPS36-201ENST00000378060 TMEM254Q8TBM7 123 aa5.87□□□□□ -1.47
VPS36-201ENST00000378060 A6NED7 52 aa5.87□□□□□ -1.47
VPS36-201ENST00000378060 C1orf195Q5TG92 126 aa5.87□□□□□ -1.47
VPS36-201ENST00000378060 NANOS2P60321 138 aaKnown RBP5.86□□□□□ -1.47
VPS36-201ENST00000378060 A0A0J9YWU9 116 aa5.86□□□□□ -1.47
VPS36-201ENST00000378060 C10orf25Q5T742 122 aa5.86□□□□□ -1.47
VPS36-201ENST00000378060 LINC00208Q96KT6 92 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms