RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 HIGD2AQ9BW72 106 aa7.69□□□□□ -1.18
HDAC6-203ENST00000376619 PRO0461Q9UI25 63 aa7.69□□□□□ -1.18
HDAC6-203ENST00000376619 LYPD5Q6UWN5 251 aa7.69□□□□□ -1.18
HDAC6-203ENST00000376619 TRAV23DV6A0A075B6W5 121 aa7.68□□□□□ -1.18
HDAC6-203ENST00000376619 ETDCA0A1B0GVM5 59 aa7.68□□□□□ -1.18
HDAC6-203ENST00000376619 LITAFQ99732 161 aa7.68□□□□□ -1.18
HDAC6-203ENST00000376619 IGLV5-39A0A0G2JS06 123 aa7.68□□□□□ -1.18
HDAC6-203ENST00000376619 TRACP01848 142 aa7.68□□□□□ -1.18
HDAC6-203ENST00000376619 CXCL5P42830 114 aa7.68□□□□□ -1.18
HDAC6-203ENST00000376619 DIRC1Q969H9 104 aa7.68□□□□□ -1.18
HDAC6-203ENST00000376619 CSDC2Q9Y534 153 aaKnown RBP7.68□□□□□ -1.18
HDAC6-203ENST00000376619 A0A087WVE0 104 aa7.67□□□□□ -1.18
HDAC6-203ENST00000376619 TRBV10-3A0A0K0K1G6 114 aa7.67□□□□□ -1.18
HDAC6-203ENST00000376619 hADV29S1A0JD25 119 aa7.67□□□□□ -1.18
HDAC6-203ENST00000376619 TIMM17BO60830 172 aa7.66□□□□□ -1.18
HDAC6-203ENST00000376619 SBSPONQ8IVN8 264 aa7.66□□□□□ -1.18
HDAC6-203ENST00000376619 TENM2Q9NT68 2774 aa7.66□□□□□ -1.18
HDAC6-203ENST00000376619 SYCNQ0VAF6 134 aa7.66□□□□□ -1.18
HDAC6-203ENST00000376619 ESRGQ1W209 222 aa7.66□□□□□ -1.18
HDAC6-203ENST00000376619 A0A1B0GX51 115 aa7.66□□□□□ -1.18
HDAC6-203ENST00000376619 RBM3P98179 157 aaKnown RBP7.66□□□□□ -1.18
HDAC6-203ENST00000376619 Q8IZM0 81 aa7.66□□□□□ -1.18
HDAC6-203ENST00000376619 C3orf84H3BNL1 204 aa7.65□□□□□ -1.18
HDAC6-203ENST00000376619 CDIP1Q9H305 208 aa7.65□□□□□ -1.18
HDAC6-203ENST00000376619 PPDPFQ9H3Y8 114 aa7.65□□□□□ -1.18
HDAC6-203ENST00000376619 FAM104AQ969W3 186 aa7.64□□□□□ -1.19
HDAC6-203ENST00000376619 Q8NAQ8 132 aa7.64□□□□□ -1.19
HDAC6-203ENST00000376619 COX7BP24311 80 aa7.63□□□□□ -1.19
HDAC6-203ENST00000376619 NDUFV3P56181 108 aaKnown RBP7.63□□□□□ -1.19
HDAC6-203ENST00000376619 Q6ZRU5 148 aa7.63□□□□□ -1.19
HDAC6-203ENST00000376619 ENHOQ6UWT2 76 aa7.63□□□□□ -1.19
HDAC6-203ENST00000376619 KRTAP10-11P60412 298 aa7.62□□□□□ -1.19
HDAC6-203ENST00000376619 SPATA25Q9BR10 227 aa7.62□□□□□ -1.19
HDAC6-203ENST00000376619 CITED1Q99966 193 aa7.62□□□□□ -1.19
HDAC6-203ENST00000376619 F8WEM9 126 aa7.61□□□□□ -1.19
HDAC6-203ENST00000376619 CCDC179H3BU77 68 aa7.61□□□□□ -1.19
HDAC6-203ENST00000376619 TMEM256-PLSCR3K7ERE1 68 aa7.61□□□□□ -1.19
HDAC6-203ENST00000376619 SMIM20Q8N5G0 67 aa7.61□□□□□ -1.19
HDAC6-203ENST00000376619 A0A1B0GUV1 79 aa7.61□□□□□ -1.19
HDAC6-203ENST00000376619 IGLV5-45A0A087WSX0 123 aa7.6□□□□□ -1.19
HDAC6-203ENST00000376619 TRRAPQ9Y4A5 3859 aa7.6□□□□□ -1.19
HDAC6-203ENST00000376619 RPL28P46779 137 aaKnown RBP7.59□□□□□ -1.19
HDAC6-203ENST00000376619 TRAV10A0A0B4J240 114 aa7.58□□□□□ -1.2
HDAC6-203ENST00000376619 ZNF73O43830 326 aaPredicted RBP7.58□□□□□ -1.2
HDAC6-203ENST00000376619 RMI2Q96E14 147 aa7.58□□□□□ -1.2
HDAC6-203ENST00000376619 USP17L23D6RBM5 183 aa7.58□□□□□ -1.2
HDAC6-203ENST00000376619 C3orf22Q8N5N4 141 aa7.58□□□□□ -1.2
HDAC6-203ENST00000376619 ZNF469Q96JG9 3925 aaPredicted RBP7.58□□□□□ -1.2
HDAC6-203ENST00000376619 FUSP35637 526 aaKnown RBP eCLIP7.57□□□□□ -1.2
HDAC6-203ENST00000376619 LINC00643Q86TS7 51 aa7.57□□□□□ -1.2
HDAC6-203ENST00000376619 CCKP06307 115 aa7.57□□□□□ -1.2
HDAC6-203ENST00000376619 NREPQ16612 68 aa7.56□□□□□ -1.2
HDAC6-203ENST00000376619 Q8N814 137 aa7.56□□□□□ -1.2
HDAC6-203ENST00000376619 LINC00846Q9NV44 126 aa7.56□□□□□ -1.2
HDAC6-203ENST00000376619 C6orf48Q9UBA6 75 aa7.56□□□□□ -1.2
HDAC6-203ENST00000376619 GHRHP01286 108 aa7.56□□□□□ -1.2
HDAC6-203ENST00000376619 FAM19A1Q7Z5A9 133 aa7.56□□□□□ -1.2
HDAC6-203ENST00000376619 JMJD7-PLA2G4BH0Y9G9 81 aa7.56□□□□□ -1.2
HDAC6-203ENST00000376619 C9orf129Q5T035 196 aaKnown RBP7.56□□□□□ -1.2
HDAC6-203ENST00000376619 ACYP1P07311 99 aa7.55□□□□□ -1.2
HDAC6-203ENST00000376619 LRCOL1A6NCL2 159 aa7.54□□□□□ -1.2
HDAC6-203ENST00000376619 DEFB116Q30KQ4 102 aa7.54□□□□□ -1.2
HDAC6-203ENST00000376619 IL17DQ8TAD2 202 aa7.54□□□□□ -1.2
HDAC6-203ENST00000376619 C20orf197Q8N268 126 aa7.54□□□□□ -1.2
HDAC6-203ENST00000376619 Q8N9L7 120 aa7.54□□□□□ -1.2
HDAC6-203ENST00000376619 UPK3BQ9BT76 320 aa7.53□□□□□ -1.2
HDAC6-203ENST00000376619 KLK5Q9Y337 293 aaPredicted RBP7.53□□□□□ -1.2
HDAC6-203ENST00000376619 UBE2AP49459 152 aa7.52□□□□□ -1.2
HDAC6-203ENST00000376619 HRCT1Q6UXD1 115 aa7.52□□□□□ -1.21
HDAC6-203ENST00000376619 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.51□□□□□ -1.21
HDAC6-203ENST00000376619 FAM168BA1KXE4 195 aa7.5□□□□□ -1.21
HDAC6-203ENST00000376619 PRLHP81277 87 aa7.5□□□□□ -1.21
HDAC6-203ENST00000376619 CASC10Q5T4H9 136 aa7.5□□□□□ -1.21
HDAC6-203ENST00000376619 NDUFC2-KCTD14E9PQ53 114 aa7.49□□□□□ -1.21
HDAC6-203ENST00000376619 M0R378 163 aa7.49□□□□□ -1.21
HDAC6-203ENST00000376619 COX17Q14061 63 aa7.49□□□□□ -1.21
HDAC6-203ENST00000376619 SNURFQ9Y675 71 aa7.49□□□□□ -1.21
HDAC6-203ENST00000376619 LY6G6CO95867 125 aa7.49□□□□□ -1.21
HDAC6-203ENST00000376619 EGFEM1PQ0D2K5 195 aa7.48□□□□□ -1.21
HDAC6-203ENST00000376619 KIAA0087Q14695 138 aa7.48□□□□□ -1.21
HDAC6-203ENST00000376619 LINC00588Q9Y4M8 146 aa7.48□□□□□ -1.21
HDAC6-203ENST00000376619 A0A0G2JQZ4 141 aa7.48□□□□□ -1.21
HDAC6-203ENST00000376619 A0A1W2PNN7 141 aa7.48□□□□□ -1.21
HDAC6-203ENST00000376619 CHTF8P0CG12 524 aa7.48□□□□□ -1.21
HDAC6-203ENST00000376619 TGP01266 2768 aa7.47□□□□□ -1.21
HDAC6-203ENST00000376619 Q6ZRP5 223 aa7.47□□□□□ -1.21
HDAC6-203ENST00000376619 LINC00575Q6W349 94 aa7.46□□□□□ -1.21
HDAC6-203ENST00000376619 BPY2O14599 106 aa7.46□□□□□ -1.22
HDAC6-203ENST00000376619 PRR4Q16378 134 aa7.46□□□□□ -1.22
HDAC6-203ENST00000376619 SMCR5Q8TEV8 140 aa7.45□□□□□ -1.22
HDAC6-203ENST00000376619 M0QXV9 152 aa7.45□□□□□ -1.22
HDAC6-203ENST00000376619 K7EIL1 84 aa7.45□□□□□ -1.22
HDAC6-203ENST00000376619 ATOX1O00244 68 aa7.45□□□□□ -1.22
HDAC6-203ENST00000376619 NDUFS5O43920 106 aa7.44□□□□□ -1.22
HDAC6-203ENST00000376619 C7orf33Q8WU49 177 aa7.44□□□□□ -1.22
HDAC6-203ENST00000376619 IGLV9-49A0A0B4J1Y8 123 aa7.43□□□□□ -1.22
HDAC6-203ENST00000376619 ST20-AS1Q8NBB2 130 aa7.43□□□□□ -1.22
HDAC6-203ENST00000376619 WFDC13Q8IUB5 93 aa7.42□□□□□ -1.22
HDAC6-203ENST00000376619 Q8NDZ9 215 aa7.42□□□□□ -1.22
HDAC6-203ENST00000376619 H0Y9J4 135 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms