RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 PRR26Q8N8Z3 221 aa4.83□□□□□ -1.64
USP1-202ENST00000371146 SMCR5Q8TEV8 140 aa4.83□□□□□ -1.64
USP1-202ENST00000371146 C2orf66Q6UXQ4 117 aa4.83□□□□□ -1.64
USP1-202ENST00000371146 ZNF575Q86XF7 245 aa4.83□□□□□ -1.64
USP1-202ENST00000371146 M0QY20 66 aa4.83□□□□□ -1.64
USP1-202ENST00000371146 PPP1R17O96001 155 aa4.83□□□□□ -1.64
USP1-202ENST00000371146 C6orf223Q8N319 242 aa4.83□□□□□ -1.64
USP1-202ENST00000371146 CFC1BP0CG36 223 aa4.82□□□□□ -1.64
USP1-202ENST00000371146 CFC1P0CG37 223 aa4.82□□□□□ -1.64
USP1-202ENST00000371146 PLNP26678 52 aa4.82□□□□□ -1.64
USP1-202ENST00000371146 IGLV5-52A0A0A0MRZ9 124 aa4.81□□□□□ -1.64
USP1-202ENST00000371146 TRBV30A0A0K0K1B3 111 aa4.81□□□□□ -1.64
USP1-202ENST00000371146 CCKP06307 115 aa4.81□□□□□ -1.64
USP1-202ENST00000371146 SFTA2Q6UW10 78 aa4.81□□□□□ -1.64
USP1-202ENST00000371146 KTN1-AS1Q86SY8 53 aa4.81□□□□□ -1.64
USP1-202ENST00000371146 TIMM17BO60830 172 aa4.81□□□□□ -1.64
USP1-202ENST00000371146 LELP1Q5T871 98 aa4.81□□□□□ -1.64
USP1-202ENST00000371146 CAMK2N2Q96S95 79 aa4.81□□□□□ -1.64
USP1-202ENST00000371146 H7BZZ5 65 aa4.81□□□□□ -1.64
USP1-202ENST00000371146 H7C423 109 aa4.81□□□□□ -1.64
USP1-202ENST00000371146 DAND5Q8N907 189 aa4.8□□□□□ -1.64
USP1-202ENST00000371146 RMI2Q96E14 147 aa4.8□□□□□ -1.64
USP1-202ENST00000371146 SMIM2Q9BVW6 85 aa4.8□□□□□ -1.64
USP1-202ENST00000371146 TRAV8-3A0A0A6YYJ7 113 aa4.8□□□□□ -1.64
USP1-202ENST00000371146 LCE6AA0A183 80 aa4.8□□□□□ -1.64
USP1-202ENST00000371146 BCE1O60756 84 aa4.8□□□□□ -1.64
USP1-202ENST00000371146 LAGE3Q14657 143 aa4.8□□□□□ -1.64
USP1-202ENST00000371146 CHCHD10Q8WYQ3 142 aaPredicted RBP4.8□□□□□ -1.64
USP1-202ENST00000371146 C8orf87E5RJ46 101 aa4.8□□□□□ -1.64
USP1-202ENST00000371146 LGALS3P17931 250 aaKnown RBP4.79□□□□□ -1.64
USP1-202ENST00000371146 PRKDCP78527 4128 aaKnown RBP4.79□□□□□ -1.64
USP1-202ENST00000371146 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.79□□□□□ -1.64
USP1-202ENST00000371146 TRBV10-1A0A0K0K1A3 114 aa4.79□□□□□ -1.64
USP1-202ENST00000371146 IBA57-AS1B1ANH7 110 aa4.79□□□□□ -1.64
USP1-202ENST00000371146 LINC00158P58513 81 aa4.79□□□□□ -1.64
USP1-202ENST00000371146 UBE2BP63146 152 aa4.79□□□□□ -1.64
USP1-202ENST00000371146 COX6A2Q02221 97 aa4.79□□□□□ -1.64
USP1-202ENST00000371146 XAGE1AQ9HD64 81 aa4.79□□□□□ -1.64
USP1-202ENST00000371146 Q6JHZ5 121 aa4.78□□□□□ -1.64
USP1-202ENST00000371146 SCGB1D4Q6XE38 83 aa4.78□□□□□ -1.64
USP1-202ENST00000371146 NTM-AS1Q6ZSK4 140 aa4.78□□□□□ -1.64
USP1-202ENST00000371146 LINC00474Q9P2X8 69 aa4.78□□□□□ -1.64
USP1-202ENST00000371146 TRAV12-1A0A0B4J245 112 aa4.77□□□□□ -1.65
USP1-202ENST00000371146 KLKP1Q107X0 134 aa4.77□□□□□ -1.65
USP1-202ENST00000371146 TRBV27A0A0K0K1C4 114 aa4.77□□□□□ -1.65
USP1-202ENST00000371146 NDUFC1O43677 76 aa4.77□□□□□ -1.65
USP1-202ENST00000371146 KRTAP1-5Q9BYS1 174 aa4.77□□□□□ -1.65
USP1-202ENST00000371146 H7C2G1 150 aa4.77□□□□□ -1.65
USP1-202ENST00000371146 NDUFS5O43920 106 aa4.77□□□□□ -1.65
USP1-202ENST00000371146 CHTF8P0CG12 524 aa4.77□□□□□ -1.65
USP1-202ENST00000371146 COX7A2LO14548 114 aa4.76□□□□□ -1.65
USP1-202ENST00000371146 MRPL35Q9NZE8 188 aaKnown RBP4.76□□□□□ -1.65
USP1-202ENST00000371146 SPAG11BQ08648 103 aa4.76□□□□□ -1.65
USP1-202ENST00000371146 C9orf116Q5BN46 136 aaPredicted RBP4.76□□□□□ -1.65
USP1-202ENST00000371146 TIMM21Q9BVV7 248 aa4.76□□□□□ -1.65
USP1-202ENST00000371146 M0R378 163 aa4.75□□□□□ -1.65
USP1-202ENST00000371146 RNF185Q96GF1 192 aa4.75□□□□□ -1.65
USP1-202ENST00000371146 TMEM223A0PJW6 202 aa4.75□□□□□ -1.65
USP1-202ENST00000371146 ZNF815PA8K554 130 aa4.75□□□□□ -1.65
USP1-202ENST00000371146 F8VRH5 84 aa4.75□□□□□ -1.65
USP1-202ENST00000371146 LST1O00453 97 aa4.75□□□□□ -1.65
USP1-202ENST00000371146 PAPPA-AS1Q5QFB9 102 aa4.74□□□□□ -1.65
USP1-202ENST00000371146 TMEM141Q96I45 108 aa4.74□□□□□ -1.65
USP1-202ENST00000371146 UBE2D4Q9Y2X8 147 aa4.74□□□□□ -1.65
USP1-202ENST00000371146 A0A087WZ39 114 aa4.74□□□□□ -1.65
USP1-202ENST00000371146 COX6CP09669 75 aa4.74□□□□□ -1.65
USP1-202ENST00000371146 C20orf203Q8NBC4 194 aa4.74□□□□□ -1.65
USP1-202ENST00000371146 TRAV13-2A0A0B4J235 113 aa4.73□□□□□ -1.65
USP1-202ENST00000371146 RBM3P98179 157 aaKnown RBP4.73□□□□□ -1.65
USP1-202ENST00000371146 INAFM2P0DMQ5 153 aa4.73□□□□□ -1.65
USP1-202ENST00000371146 PHF5AQ7RTV0 110 aaKnown RBP4.73□□□□□ -1.65
USP1-202ENST00000371146 TSHBP01222 138 aa4.73□□□□□ -1.65
USP1-202ENST00000371146 C20orf197Q8N268 126 aa4.73□□□□□ -1.65
USP1-202ENST00000371146 A0A096LNI7 61 aa4.72□□□□□ -1.65
USP1-202ENST00000371146 CIRBPQ14011 172 aaKnown RBP4.72□□□□□ -1.65
USP1-202ENST00000371146 CDKN2A-AS1Q9UH64 79 aa4.72□□□□□ -1.65
USP1-202ENST00000371146 IGLV4-69A0A075B6H9 119 aa4.72□□□□□ -1.65
USP1-202ENST00000371146 LINC00959A0A1B0GUT2 108 aa4.72□□□□□ -1.65
USP1-202ENST00000371146 TRIAP1O43715 76 aa4.72□□□□□ -1.65
USP1-202ENST00000371146 MIAQ16674 131 aa4.72□□□□□ -1.65
USP1-202ENST00000371146 UNQ6190/PRO20217Q6UXQ8 127 aa4.72□□□□□ -1.65
USP1-202ENST00000371146 MED14OSP0DP75 135 aa4.71□□□□□ -1.65
USP1-202ENST00000371146 Q6ZVQ6 151 aa4.71□□□□□ -1.65
USP1-202ENST00000371146 A8MTW9 85 aa4.71□□□□□ -1.66
USP1-202ENST00000371146 RTL8CO15255 209 aa4.71□□□□□ -1.66
USP1-202ENST00000371146 EIF4EBP3O60516 100 aaPredicted RBP4.71□□□□□ -1.66
USP1-202ENST00000371146 GHRHP01286 108 aa4.71□□□□□ -1.66
USP1-202ENST00000371146 KRTAP10-2P60368 255 aa4.71□□□□□ -1.66
USP1-202ENST00000371146 KIF25-AS1Q9Y6Z4 181 aa4.71□□□□□ -1.66
USP1-202ENST00000371146 TRAV7A0A075B6U4 112 aa4.71□□□□□ -1.66
USP1-202ENST00000371146 ZNF73O43830 326 aaPredicted RBP4.71□□□□□ -1.66
USP1-202ENST00000371146 SYCNQ0VAF6 134 aa4.71□□□□□ -1.66
USP1-202ENST00000371146 ENHOQ6UWT2 76 aa4.71□□□□□ -1.66
USP1-202ENST00000371146 Q1T7F1 81 aa4.7□□□□□ -1.66
USP1-202ENST00000371146 LINC01556Q5JQF7 62 aa4.7□□□□□ -1.66
USP1-202ENST00000371146 NRACQ8N912 160 aa4.7□□□□□ -1.66
USP1-202ENST00000371146 RPL37AP8A6NKH3 93 aa4.7□□□□□ -1.66
USP1-202ENST00000371146 ATP5EP2Q5VTU8 51 aa4.7□□□□□ -1.66
USP1-202ENST00000371146 IGKV2-28A0A075B6P5 120 aa4.69□□□□□ -1.66
USP1-202ENST00000371146 A0A087WTM6 91 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms