RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 Q8NAQ8 132 aa13.48□□□□□ -0.25
LMO4-202ENST00000370544 SOSTDC1Q6X4U4 206 aa13.48□□□□□ -0.25
LMO4-202ENST00000370544 SPATA3Q8NHX4 192 aa13.47□□□□□ -0.25
LMO4-202ENST00000370544 CHD8Q9HCK8 2581 aa13.47□□□□□ -0.25
LMO4-202ENST00000370544 TMEM254Q8TBM7 123 aa13.45□□□□□ -0.26
LMO4-202ENST00000370544 SPTBN4Q9H254 2564 aa13.45□□□□□ -0.26
LMO4-202ENST00000370544 CDIP1Q9H305 208 aa13.45□□□□□ -0.26
LMO4-202ENST00000370544 SETD2Q9BYW2 2564 aaPredicted RBP13.44□□□□□ -0.26
LMO4-202ENST00000370544 FAM218AQ96MZ4 157 aa13.44□□□□□ -0.26
LMO4-202ENST00000370544 ELOF1P60002 83 aaKnown RBP13.43□□□□□ -0.26
LMO4-202ENST00000370544 GOLGB1Q14789 3259 aaKnown RBP13.43□□□□□ -0.26
LMO4-202ENST00000370544 SMCPP49901 116 aaPredicted RBP13.4□□□□□ -0.26
LMO4-202ENST00000370544 LINC00588Q9Y4M8 146 aa13.39□□□□□ -0.27
LMO4-202ENST00000370544 MOBPQ13875 183 aa13.38□□□□□ -0.27
LMO4-202ENST00000370544 SMIM29Q86T20 159 aa13.37□□□□□ -0.27
LMO4-202ENST00000370544 NBDYA0A0U1RRE5 68 aa13.37□□□□□ -0.27
LMO4-202ENST00000370544 PHF5AQ7RTV0 110 aaKnown RBP13.37□□□□□ -0.27
LMO4-202ENST00000370544 SPINK1P00995 79 aa13.36□□□□□ -0.27
LMO4-202ENST00000370544 Q6ZRX8 168 aa13.35□□□□□ -0.27
LMO4-202ENST00000370544 hDV103S1A0JD37 113 aa13.35□□□□□ -0.27
LMO4-202ENST00000370544 GVQW2A0A096LPI5 108 aaPredicted RBP13.34□□□□□ -0.27
LMO4-202ENST00000370544 C1orf64Q8NEQ6 169 aa13.34□□□□□ -0.27
LMO4-202ENST00000370544 RTL8CO15255 209 aa13.34□□□□□ -0.27
LMO4-202ENST00000370544 PRO0461Q9UI25 63 aa13.34□□□□□ -0.27
LMO4-202ENST00000370544 C16orf90A8MZG2 172 aa13.33□□□□□ -0.28
LMO4-202ENST00000370544 SPACA4Q8TDM5 124 aa13.3□□□□□ -0.28
LMO4-202ENST00000370544 Q6ZQT0 140 aa13.3□□□□□ -0.28
LMO4-202ENST00000370544 A0A1B0GW54 56 aa13.29□□□□□ -0.28
LMO4-202ENST00000370544 EPM2AB3EWF7 344 aa13.29□□□□□ -0.28
LMO4-202ENST00000370544 LINC00476Q8WZB0 136 aa13.29□□□□□ -0.28
LMO4-202ENST00000370544 CSNK1G2-AS1Q8NCQ2 148 aa13.28□□□□□ -0.28
LMO4-202ENST00000370544 PKD1L2Q7Z442 2459 aa13.28□□□□□ -0.28
LMO4-202ENST00000370544 PSPHP1O15172 72 aa13.28□□□□□ -0.28
LMO4-202ENST00000370544 LITAFQ99732 161 aa13.28□□□□□ -0.28
LMO4-202ENST00000370544 ANKRD17O75179 2603 aaKnown RBP13.28□□□□□ -0.28
LMO4-202ENST00000370544 IGKV2D-30A0A075B6S6 120 aa13.27□□□□□ -0.28
LMO4-202ENST00000370544 LOC110117498A0A087WWA1 95 aa13.27□□□□□ -0.28
LMO4-202ENST00000370544 IGKV2-30P06310 120 aa13.27□□□□□ -0.28
LMO4-202ENST00000370544 MTORP42345 2549 aa13.27□□□□□ -0.28
LMO4-202ENST00000370544 DNAH10OSP0CZ25 163 aa13.27□□□□□ -0.29
LMO4-202ENST00000370544 C1orf195Q5TG92 126 aa13.26□□□□□ -0.29
LMO4-202ENST00000370544 ST20-AS1Q8NBB2 130 aa13.26□□□□□ -0.29
LMO4-202ENST00000370544 Q8NBF4 154 aa13.26□□□□□ -0.29
LMO4-202ENST00000370544 Q6ZRP5 223 aa13.26□□□□□ -0.29
LMO4-202ENST00000370544 POLQO75417 2590 aa13.25□□□□□ -0.29
LMO4-202ENST00000370544 CRYGAP11844 174 aa13.25□□□□□ -0.29
LMO4-202ENST00000370544 A0A096LNT2 108 aa13.25□□□□□ -0.29
LMO4-202ENST00000370544 CHTF8P0CG12 524 aa13.25□□□□□ -0.29
LMO4-202ENST00000370544 TP53AIP1Q9HCN2 124 aa13.24□□□□□ -0.29
LMO4-202ENST00000370544 VPREB1P12018 145 aa13.2□□□□□ -0.3
LMO4-202ENST00000370544 BCE1O60756 84 aa13.2□□□□□ -0.3
LMO4-202ENST00000370544 PMAIP1Q13794 54 aa13.2□□□□□ -0.3
LMO4-202ENST00000370544 MUC4Q99102 2169 aa13.2□□□□□ -0.3
LMO4-202ENST00000370544 IGLV6-57P01721 117 aa13.19□□□□□ -0.3
LMO4-202ENST00000370544 KRTAP10-11P60412 298 aa13.18□□□□□ -0.3
LMO4-202ENST00000370544 C7orf65Q6ZTY9 151 aa13.18□□□□□ -0.3
LMO4-202ENST00000370544 FAM168BA1KXE4 195 aa13.17□□□□□ -0.3
LMO4-202ENST00000370544 WWC2-AS2Q96NR7 200 aa13.14□□□□□ -0.31
LMO4-202ENST00000370544 FASNP49327 2511 aaKnown RBP13.14□□□□□ -0.31
LMO4-202ENST00000370544 FAM229AH3BQW9 127 aa13.14□□□□□ -0.31
LMO4-202ENST00000370544 TYMSOSQ8TAI1 123 aa13.13□□□□□ -0.31
LMO4-202ENST00000370544 KRTAP10-3P60369 221 aa13.13□□□□□ -0.31
LMO4-202ENST00000370544 SERTAD4-AS1Q5TG53 156 aa13.13□□□□□ -0.31
LMO4-202ENST00000370544 ACANP16112 2415 aa13.13□□□□□ -0.31
LMO4-202ENST00000370544 C19orf73Q9NVV2 129 aa13.12□□□□□ -0.31
LMO4-202ENST00000370544 K7EIL1 84 aa13.12□□□□□ -0.31
LMO4-202ENST00000370544 GIG44P09565 113 aaPredicted RBP13.11□□□□□ -0.31
LMO4-202ENST00000370544 RPL37AP61513 92 aaKnown RBP13.1□□□□□ -0.31
LMO4-202ENST00000370544 LINC00313P59037 77 aa13.1□□□□□ -0.31
LMO4-202ENST00000370544 IGLV1-50A0A075B6I6 118 aa13.09□□□□□ -0.31
LMO4-202ENST00000370544 TRBV7-4A0A0J9YYF1 115 aa13.08□□□□□ -0.32
LMO4-202ENST00000370544 ACYP2P14621 99 aa13.08□□□□□ -0.32
LMO4-202ENST00000370544 PRR34Q9NV39 138 aa13.07□□□□□ -0.32
LMO4-202ENST00000370544 H3BPC8 53 aa13.07□□□□□ -0.32
LMO4-202ENST00000370544 KCNQ1DNQ9H478 68 aa13.06□□□□□ -0.32
LMO4-202ENST00000370544 TRAV22A0A0B4J277 110 aa13.05□□□□□ -0.32
LMO4-202ENST00000370544 LINC00612Q8N6U2 182 aa13.04□□□□□ -0.32
LMO4-202ENST00000370544 C15orf56Q8N910 161 aa13.04□□□□□ -0.32
LMO4-202ENST00000370544 TM2D3Q9BRN9 247 aa13.04□□□□□ -0.32
LMO4-202ENST00000370544 A0A1B0GU69 56 aa13.03□□□□□ -0.32
LMO4-202ENST00000370544 EIF4EBP3O60516 100 aaPredicted RBP13.02□□□□□ -0.33
LMO4-202ENST00000370544 LINC00528Q8N1L1 170 aa13.01□□□□□ -0.33
LMO4-202ENST00000370544 A8MWP4 228 aa12.99□□□□□ -0.33
LMO4-202ENST00000370544 KRTAP1-3Q8IUG1 177 aa12.98□□□□□ -0.33
LMO4-202ENST00000370544 Q96NJ1 140 aa12.97□□□□□ -0.33
LMO4-202ENST00000370544 EPG5Q9HCE0 2579 aa12.96□□□□□ -0.33
LMO4-202ENST00000370544 K7EQZ3 153 aa12.96□□□□□ -0.33
LMO4-202ENST00000370544 C9orf129Q5T035 196 aaKnown RBP12.95□□□□□ -0.34
LMO4-202ENST00000370544 PLA2G1BP04054 148 aaKnown RBP12.95□□□□□ -0.34
LMO4-202ENST00000370544 DNAH12Q6ZR08 3092 aa12.94□□□□□ -0.34
LMO4-202ENST00000370544 SPAG11AQ6PDA7 123 aa12.94□□□□□ -0.34
LMO4-202ENST00000370544 C8orf87E5RJ46 101 aa12.93□□□□□ -0.34
LMO4-202ENST00000370544 IGFL1Q6UW32 110 aa12.92□□□□□ -0.34
LMO4-202ENST00000370544 F8P00451 2351 aa12.91□□□□□ -0.34
LMO4-202ENST00000370544 LOC101927531A0A1B0GV80 90 aa12.9□□□□□ -0.35
LMO4-202ENST00000370544 MRPL34Q9BQ48 92 aaKnown RBP12.9□□□□□ -0.35
LMO4-202ENST00000370544 TLX1NBP0CAT3 122 aa12.89□□□□□ -0.35
LMO4-202ENST00000370544 KRTAP1-1Q07627 177 aa12.89□□□□□ -0.35
LMO4-202ENST00000370544 RPS28P62857 69 aaKnown RBP12.88□□□□□ -0.35
LMO4-202ENST00000370544 A0A087WTM6 91 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms