RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 IGKV2D-28P01615 120 aa9.25□□□□□ -0.93
HMGCS2-201ENST00000369406 PRO1854Q9UHT4 67 aa9.25□□□□□ -0.93
HMGCS2-201ENST00000369406 FRAS1Q86XX4 4008 aa9.25□□□□□ -0.93
HMGCS2-201ENST00000369406 CAMK2N2Q96S95 79 aa9.24□□□□□ -0.93
HMGCS2-201ENST00000369406 DNAH17Q9UFH2 4485 aa9.24□□□□□ -0.93
HMGCS2-201ENST00000369406 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.24□□□□□ -0.93
HMGCS2-201ENST00000369406 NBDYA0A0U1RRE5 68 aa9.24□□□□□ -0.93
HMGCS2-201ENST00000369406 SND1-IT1Q9HBX3 110 aa9.24□□□□□ -0.93
HMGCS2-201ENST00000369406 PRR3P79522 188 aaKnown RBP9.23□□□□□ -0.93
HMGCS2-201ENST00000369406 ANAPC13Q9BS18 74 aa9.23□□□□□ -0.93
HMGCS2-201ENST00000369406 SMCPP49901 116 aaPredicted RBP9.23□□□□□ -0.93
HMGCS2-201ENST00000369406 M0R2N4 97 aa9.22□□□□□ -0.93
HMGCS2-201ENST00000369406 LINC00337Q8N6G1 96 aa9.22□□□□□ -0.93
HMGCS2-201ENST00000369406 B5MCH6 92 aa9.22□□□□□ -0.93
HMGCS2-201ENST00000369406 COX17Q14061 63 aa9.22□□□□□ -0.93
HMGCS2-201ENST00000369406 C2orf48Q96LS8 159 aa9.22□□□□□ -0.93
HMGCS2-201ENST00000369406 RPL13AP40429 203 aaKnown RBP9.21□□□□□ -0.93
HMGCS2-201ENST00000369406 RMI2Q96E14 147 aa9.21□□□□□ -0.94
HMGCS2-201ENST00000369406 PPDPFQ9H3Y8 114 aa9.21□□□□□ -0.94
HMGCS2-201ENST00000369406 LOC107984156A0A0G2JMH3 177 aa9.2□□□□□ -0.94
HMGCS2-201ENST00000369406 Q6ZRN7 208 aaPredicted RBP9.2□□□□□ -0.94
HMGCS2-201ENST00000369406 ARL17AQ8IVW1 177 aa9.2□□□□□ -0.94
HMGCS2-201ENST00000369406 SACSQ9NZJ4 4579 aa9.2□□□□□ -0.94
HMGCS2-201ENST00000369406 XAGE1AQ9HD64 81 aa9.2□□□□□ -0.94
HMGCS2-201ENST00000369406 TRBV30A0A0K0K1B3 111 aa9.19□□□□□ -0.94
HMGCS2-201ENST00000369406 WWC2-AS2Q96NR7 200 aa9.19□□□□□ -0.94
HMGCS2-201ENST00000369406 SYCNQ0VAF6 134 aa9.19□□□□□ -0.94
HMGCS2-201ENST00000369406 TRIAP1O43715 76 aa9.18□□□□□ -0.94
HMGCS2-201ENST00000369406 CARD19Q96LW7 228 aa9.18□□□□□ -0.94
HMGCS2-201ENST00000369406 Q6ZRP5 223 aa9.17□□□□□ -0.94
HMGCS2-201ENST00000369406 DNAH11Q96DT5 4516 aa9.17□□□□□ -0.94
HMGCS2-201ENST00000369406 Q1RN00 199 aa9.16□□□□□ -0.94
HMGCS2-201ENST00000369406 COPS9Q8WXC6 57 aa9.16□□□□□ -0.94
HMGCS2-201ENST00000369406 PSMB2P49721 201 aa9.15□□□□□ -0.94
HMGCS2-201ENST00000369406 PPDPFLQ8WWR9 84 aa9.15□□□□□ -0.94
HMGCS2-201ENST00000369406 LRCOL1A6NCL2 159 aa9.15□□□□□ -0.94
HMGCS2-201ENST00000369406 NCR3O14931 201 aa9.15□□□□□ -0.94
HMGCS2-201ENST00000369406 GAGE2EQ4V326 116 aa9.15□□□□□ -0.94
HMGCS2-201ENST00000369406 Q6ZR54 194 aa9.15□□□□□ -0.94
HMGCS2-201ENST00000369406 GAGE2DQ9UEU5 116 aa9.15□□□□□ -0.94
HMGCS2-201ENST00000369406 PSCAO43653 123 aa9.14□□□□□ -0.95
HMGCS2-201ENST00000369406 TCL1BO95988 128 aa9.14□□□□□ -0.95
HMGCS2-201ENST00000369406 TTC32Q5I0X7 151 aa9.14□□□□□ -0.95
HMGCS2-201ENST00000369406 SMIM20Q8N5G0 67 aa9.14□□□□□ -0.95
HMGCS2-201ENST00000369406 NDUFC2-KCTD14E9PQ53 114 aa9.14□□□□□ -0.95
HMGCS2-201ENST00000369406 C9orf129Q5T035 196 aaKnown RBP9.14□□□□□ -0.95
HMGCS2-201ENST00000369406 TEN1Q86WV5 123 aa9.13□□□□□ -0.95
HMGCS2-201ENST00000369406 FAT2Q9NYQ8 4349 aa9.13□□□□□ -0.95
HMGCS2-201ENST00000369406 LY6G6CO95867 125 aa9.12□□□□□ -0.95
HMGCS2-201ENST00000369406 CCDC179H3BU77 68 aa9.12□□□□□ -0.95
HMGCS2-201ENST00000369406 DNAH5Q8TE73 4624 aa9.12□□□□□ -0.95
HMGCS2-201ENST00000369406 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.11□□□□□ -0.95
HMGCS2-201ENST00000369406 F8WDY8 70 aa9.11□□□□□ -0.95
HMGCS2-201ENST00000369406 NDUFC2O95298 119 aa9.11□□□□□ -0.95
HMGCS2-201ENST00000369406 LINC00476Q8WZB0 136 aa9.11□□□□□ -0.95
HMGCS2-201ENST00000369406 CLEC2BQ92478 149 aa9.11□□□□□ -0.95
HMGCS2-201ENST00000369406 SMIM11BQ8TCY0 68 aa9.11□□□□□ -0.95
HMGCS2-201ENST00000369406 TRAV13-2A0A0B4J235 113 aa9.1□□□□□ -0.95
HMGCS2-201ENST00000369406 RPL18AQ02543 176 aaKnown RBP9.1□□□□□ -0.95
HMGCS2-201ENST00000369406 TRBV20-1A0A075B6N2 111 aa9.1□□□□□ -0.95
HMGCS2-201ENST00000369406 SCGB1C2P0DMR2 95 aa9.1□□□□□ -0.95
HMGCS2-201ENST00000369406 OR13C6PQ8NH95 151 aa9.1□□□□□ -0.95
HMGCS2-201ENST00000369406 FAM168BA1KXE4 195 aa9.09□□□□□ -0.95
HMGCS2-201ENST00000369406 VPREB1P12018 145 aa9.09□□□□□ -0.95
HMGCS2-201ENST00000369406 FUSP35637 526 aaKnown RBP eCLIP9.09□□□□□ -0.95
HMGCS2-201ENST00000369406 NDUFV3P56181 108 aaKnown RBP9.09□□□□□ -0.95
HMGCS2-201ENST00000369406 KRTAP7-1Q8IUC3 87 aa9.09□□□□□ -0.95
HMGCS2-201ENST00000369406 ANKRD29Q8N6D5 301 aa9.09□□□□□ -0.95
HMGCS2-201ENST00000369406 PKD1P98161 4303 aa9.09□□□□□ -0.95
HMGCS2-201ENST00000369406 LINC01620Q4KN68 170 aa9.09□□□□□ -0.96
HMGCS2-201ENST00000369406 SERTAD4-AS1Q5TG53 156 aa9.09□□□□□ -0.96
HMGCS2-201ENST00000369406 TLX1NBP0CAT3 122 aa9.08□□□□□ -0.96
HMGCS2-201ENST00000369406 FAM218AQ96MZ4 157 aa9.07□□□□□ -0.96
HMGCS2-201ENST00000369406 CNBPP62633 177 aaKnown RBP9.07□□□□□ -0.96
HMGCS2-201ENST00000369406 GAGE2BQ13066 116 aa9.07□□□□□ -0.96
HMGCS2-201ENST00000369406 RPL28P46779 137 aaKnown RBP9.06□□□□□ -0.96
HMGCS2-201ENST00000369406 DNAH8Q96JB1 4490 aa9.05□□□□□ -0.96
HMGCS2-201ENST00000369406 TRBV10-3A0A0K0K1G6 114 aa9.04□□□□□ -0.96
HMGCS2-201ENST00000369406 C3orf84H3BNL1 204 aa9.04□□□□□ -0.96
HMGCS2-201ENST00000369406 SNCGO76070 127 aa9.04□□□□□ -0.96
HMGCS2-201ENST00000369406 LYRM7Q5U5X0 104 aa9.04□□□□□ -0.96
HMGCS2-201ENST00000369406 KMT2CQ8NEZ4 4911 aaKnown RBP9.04□□□□□ -0.96
HMGCS2-201ENST00000369406 A0A096LNI7 61 aa9.04□□□□□ -0.96
HMGCS2-201ENST00000369406 IGLV6-57P01721 117 aa9.04□□□□□ -0.96
HMGCS2-201ENST00000369406 A0A087WTM6 91 aa9.03□□□□□ -0.96
HMGCS2-201ENST00000369406 RYR2Q92736 4967 aa9.03□□□□□ -0.96
HMGCS2-201ENST00000369406 Q8N814 137 aa9.03□□□□□ -0.96
HMGCS2-201ENST00000369406 LST1O00453 97 aa9.02□□□□□ -0.97
HMGCS2-201ENST00000369406 TRBV10-2A0A0K0K1G8 114 aa9.02□□□□□ -0.97
HMGCS2-201ENST00000369406 LOC107984640A0A0U1RRK4 108 aa9.02□□□□□ -0.97
HMGCS2-201ENST00000369406 CHTF8P0CG12 524 aa9.02□□□□□ -0.97
HMGCS2-201ENST00000369406 A0A087WYN8 130 aa9.01□□□□□ -0.97
HMGCS2-201ENST00000369406 S100A7L2Q5SY68 101 aa9.01□□□□□ -0.97
HMGCS2-201ENST00000369406 TMEM126AQ9H061 195 aa9.01□□□□□ -0.97
HMGCS2-201ENST00000369406 IGKV2-24A0A0C4DH68 120 aa9□□□□□ -0.97
HMGCS2-201ENST00000369406 PANO1I0J062 215 aa9□□□□□ -0.97
HMGCS2-201ENST00000369406 SLC25A20O43772 301 aa9□□□□□ -0.97
HMGCS2-201ENST00000369406 ATXN8Q156A1 80 aa9□□□□□ -0.97
HMGCS2-201ENST00000369406 C14orf177Q52M58 125 aa9□□□□□ -0.97
HMGCS2-201ENST00000369406 C1orf134Q5TEV5 83 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 613.7 ms