RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 A6NDN8 102 aa5.82□□□□□ -1.48
SNX27-201ENST00000368838 KRTAP10-2P60368 255 aa5.82□□□□□ -1.48
SNX27-201ENST00000368838 TTC32Q5I0X7 151 aa5.82□□□□□ -1.48
SNX27-201ENST00000368838 C5orf38Q86SI9 138 aa5.82□□□□□ -1.48
SNX27-201ENST00000368838 CDK2AP2O75956 126 aa5.81□□□□□ -1.48
SNX27-201ENST00000368838 IGHV3-33P01772 117 aa5.81□□□□□ -1.48
SNX27-201ENST00000368838 HINT1P49773 126 aaPredicted RBP5.81□□□□□ -1.48
SNX27-201ENST00000368838 SRSF9Q13242 221 aaKnown RBP eCLIP5.81□□□□□ -1.48
SNX27-201ENST00000368838 C6orf226Q5I0X4 101 aa5.81□□□□□ -1.48
SNX27-201ENST00000368838 HIST1H4GQ99525 98 aa5.81□□□□□ -1.48
SNX27-201ENST00000368838 IGKV3OR2-268A0A0C4DH90 116 aa5.8□□□□□ -1.48
SNX27-201ENST00000368838 RPL24P83731 157 aaKnown RBP5.8□□□□□ -1.48
SNX27-201ENST00000368838 NTN5Q8WTR8 489 aaPredicted RBP5.8□□□□□ -1.48
SNX27-201ENST00000368838 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.79□□□□□ -1.48
SNX27-201ENST00000368838 A0A0B4J2C4 111 aa5.79□□□□□ -1.48
SNX27-201ENST00000368838 TRBV30A0A0K0K1B3 111 aa5.79□□□□□ -1.48
SNX27-201ENST00000368838 USP17L23D6RBM5 183 aa5.79□□□□□ -1.48
SNX27-201ENST00000368838 FXYD2P54710 66 aa5.79□□□□□ -1.48
SNX27-201ENST00000368838 MEIG1Q5JSS6 88 aa5.79□□□□□ -1.48
SNX27-201ENST00000368838 IGLV10-54A0A075B6I4 117 aa5.78□□□□□ -1.48
SNX27-201ENST00000368838 A0A0U1RRA0 63 aa5.78□□□□□ -1.48
SNX27-201ENST00000368838 ADAMTSL4-AS1Q5T5F5 129 aa5.78□□□□□ -1.48
SNX27-201ENST00000368838 CLPSL2Q6UWE3 100 aa5.78□□□□□ -1.48
SNX27-201ENST00000368838 SMIM13P0DJ93 91 aa5.77□□□□□ -1.49
SNX27-201ENST00000368838 CKS1BP61024 79 aa5.77□□□□□ -1.49
SNX27-201ENST00000368838 SPAG11BQ08648 103 aa5.77□□□□□ -1.49
SNX27-201ENST00000368838 Q8N1X5 172 aa5.77□□□□□ -1.49
SNX27-201ENST00000368838 C15orf56Q8N910 161 aa5.77□□□□□ -1.49
SNX27-201ENST00000368838 LINC00308Q8TCZ7 52 aa5.77□□□□□ -1.49
SNX27-201ENST00000368838 ERG28Q9UKR5 140 aa5.77□□□□□ -1.49
SNX27-201ENST00000368838 TAX1BP3O14907 124 aa5.76□□□□□ -1.49
SNX27-201ENST00000368838 NDUFC2O95298 119 aa5.76□□□□□ -1.49
SNX27-201ENST00000368838 TLX1NBP0CAT3 122 aa5.76□□□□□ -1.49
SNX27-201ENST00000368838 MUSTN1Q8IVN3 82 aa5.76□□□□□ -1.49
SNX27-201ENST00000368838 TOMM7Q9P0U1 55 aa5.76□□□□□ -1.49
SNX27-201ENST00000368838 FAT1Q14517 4588 aa5.76□□□□□ -1.49
SNX27-201ENST00000368838 IGKV2D-24A0A075B6R9 120 aa5.75□□□□□ -1.49
SNX27-201ENST00000368838 A0A0A0MQY5 61 aa5.75□□□□□ -1.49
SNX27-201ENST00000368838 Q6ZRN7 208 aaPredicted RBP5.75□□□□□ -1.49
SNX27-201ENST00000368838 HERC1Q15751 4861 aa5.75□□□□□ -1.49
SNX27-201ENST00000368838 CFC1BP0CG36 223 aa5.74□□□□□ -1.49
SNX27-201ENST00000368838 CFC1P0CG37 223 aa5.74□□□□□ -1.49
SNX27-201ENST00000368838 VPREB1P12018 145 aa5.74□□□□□ -1.49
SNX27-201ENST00000368838 SEC61GP60059 68 aa5.74□□□□□ -1.49
SNX27-201ENST00000368838 HAMPP81172 84 aa5.74□□□□□ -1.49
SNX27-201ENST00000368838 BATFQ16520 125 aa5.74□□□□□ -1.49
SNX27-201ENST00000368838 C14orf177Q52M58 125 aa5.74□□□□□ -1.49
SNX27-201ENST00000368838 SERTAD4-AS1Q5TG53 156 aa5.74□□□□□ -1.49
SNX27-201ENST00000368838 PRO1854Q9UHT4 67 aa5.74□□□□□ -1.49
SNX27-201ENST00000368838 VPS13BQ7Z7G8 4022 aa5.74□□□□□ -1.49
SNX27-201ENST00000368838 KRTAP19-1Q8IUB9 90 aa5.74□□□□□ -1.49
SNX27-201ENST00000368838 MIR7-3HGQ8N6C7 128 aa5.74□□□□□ -1.49
SNX27-201ENST00000368838 NHP2Q9NX24 153 aaKnown RBP5.74□□□□□ -1.49
SNX27-201ENST00000368838 FLG2Q5D862 2391 aaPredicted RBP5.73□□□□□ -1.49
SNX27-201ENST00000368838 EPM2AB3EWF7 344 aa5.73□□□□□ -1.49
SNX27-201ENST00000368838 KRTAP10-1P60331 282 aa5.73□□□□□ -1.49
SNX27-201ENST00000368838 CNBPP62633 177 aaKnown RBP5.73□□□□□ -1.49
SNX27-201ENST00000368838 C2orf82Q6UX34 121 aa5.73□□□□□ -1.49
SNX27-201ENST00000368838 SOSTDC1Q6X4U4 206 aa5.73□□□□□ -1.49
SNX27-201ENST00000368838 C6orf48Q9UBA6 75 aa5.73□□□□□ -1.49
SNX27-201ENST00000368838 DMBT1Q9UGM3 2413 aaPredicted RBP5.72□□□□□ -1.49
SNX27-201ENST00000368838 LINC00158P58513 81 aa5.72□□□□□ -1.49
SNX27-201ENST00000368838 SYCNQ0VAF6 134 aa5.72□□□□□ -1.49
SNX27-201ENST00000368838 UNQ6190/PRO20217Q6UXQ8 127 aa5.72□□□□□ -1.49
SNX27-201ENST00000368838 CAMK2N2Q96S95 79 aa5.72□□□□□ -1.49
SNX27-201ENST00000368838 PKIGQ9Y2B9 76 aa5.72□□□□□ -1.49
SNX27-201ENST00000368838 A0A087WTM6 91 aa5.71□□□□□ -1.5
SNX27-201ENST00000368838 TRAV13-2A0A0B4J235 113 aa5.71□□□□□ -1.5
SNX27-201ENST00000368838 TRBV10-2A0A0K0K1G8 114 aa5.71□□□□□ -1.5
SNX27-201ENST00000368838 NDUFC2-KCTD14E9PQ53 114 aa5.71□□□□□ -1.5
SNX27-201ENST00000368838 SMR3BP02814 79 aaPredicted RBP5.71□□□□□ -1.5
SNX27-201ENST00000368838 XGP55808 180 aa5.71□□□□□ -1.5
SNX27-201ENST00000368838 C10orf25Q5T742 122 aa5.71□□□□□ -1.5
SNX27-201ENST00000368838 LYRM7Q5U5X0 104 aa5.71□□□□□ -1.5
SNX27-201ENST00000368838 DNAH8Q96JB1 4490 aa5.7□□□□□ -1.5
SNX27-201ENST00000368838 INAFM2P0DMQ5 153 aa5.7□□□□□ -1.5
SNX27-201ENST00000368838 Q9HAA7 133 aa5.7□□□□□ -1.5
SNX27-201ENST00000368838 SND1-IT1Q9HBX3 110 aa5.7□□□□□ -1.5
SNX27-201ENST00000368838 A0A1W2PPM0 123 aa5.69□□□□□ -1.5
SNX27-201ENST00000368838 LRCOL1A6NCL2 159 aa5.69□□□□□ -1.5
SNX27-201ENST00000368838 Q5VSD8 79 aa5.69□□□□□ -1.5
SNX27-201ENST00000368838 Q6ZRU5 148 aa5.69□□□□□ -1.5
SNX27-201ENST00000368838 RAB37Q96AX2 223 aa5.69□□□□□ -1.5
SNX27-201ENST00000368838 TRBV20-1A0A075B6N2 111 aa5.68□□□□□ -1.5
SNX27-201ENST00000368838 A0A1B0GV90 55 aa5.68□□□□□ -1.5
SNX27-201ENST00000368838 TSPAN13O95857 204 aa5.68□□□□□ -1.5
SNX27-201ENST00000368838 PFN2P35080 140 aa5.68□□□□□ -1.5
SNX27-201ENST00000368838 RPL28P46779 137 aaKnown RBP5.68□□□□□ -1.5
SNX27-201ENST00000368838 DAND5Q8N907 189 aa5.68□□□□□ -1.5
SNX27-201ENST00000368838 CARD19Q96LW7 228 aa5.68□□□□□ -1.5
SNX27-201ENST00000368838 SRRM2Q9UQ35 2752 aaKnown RBP5.68□□□□□ -1.5
SNX27-201ENST00000368838 MYCBP2O75592 4640 aa5.67□□□□□ -1.5
SNX27-201ENST00000368838 IGLV5-37A0A075B6J1 123 aa5.67□□□□□ -1.5
SNX27-201ENST00000368838 IGKV2-28A0A075B6P5 120 aa5.67□□□□□ -1.5
SNX27-201ENST00000368838 IGKV2D-28P01615 120 aa5.67□□□□□ -1.5
SNX27-201ENST00000368838 SLPIP03973 132 aa5.67□□□□□ -1.5
SNX27-201ENST00000368838 FABP2P12104 132 aa5.67□□□□□ -1.5
SNX27-201ENST00000368838 HIGD2BQ4VC39 106 aa5.67□□□□□ -1.5
SNX27-201ENST00000368838 LINC01600Q96MT4 127 aa5.67□□□□□ -1.5
SNX27-201ENST00000368838 TMEM126AQ9H061 195 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms