RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 ATRXP46100 2492 aa10.75□□□□□ -0.69
NUCKS1-201ENST00000367142 FAM19A4Q96LR4 140 aa10.75□□□□□ -0.69
NUCKS1-201ENST00000367142 LINC01546A6NGU7 62 aa10.74□□□□□ -0.69
NUCKS1-201ENST00000367142 TRAV22A0A0B4J277 110 aa10.73□□□□□ -0.69
NUCKS1-201ENST00000367142 C8orf87E5RJ46 101 aa10.72□□□□□ -0.69
NUCKS1-201ENST00000367142 HCFC1P51610 2035 aa10.72□□□□□ -0.69
NUCKS1-201ENST00000367142 TTC28Q96AY4 2481 aa10.72□□□□□ -0.69
NUCKS1-201ENST00000367142 GVQW2A0A096LPI5 108 aaPredicted RBP10.71□□□□□ -0.69
NUCKS1-201ENST00000367142 IGLV5-45A0A087WSX0 123 aa10.7□□□□□ -0.7
NUCKS1-201ENST00000367142 CACNA1AO00555 2505 aa10.69□□□□□ -0.7
NUCKS1-201ENST00000367142 Q8NAQ8 132 aa10.69□□□□□ -0.7
NUCKS1-201ENST00000367142 PTPRSQ13332 1948 aa10.68□□□□□ -0.7
NUCKS1-201ENST00000367142 LOC110117498A0A087WWA1 95 aa10.68□□□□□ -0.7
NUCKS1-201ENST00000367142 ST20-AS1Q8NBB2 130 aa10.68□□□□□ -0.7
NUCKS1-201ENST00000367142 LOC101927531A0A1B0GV80 90 aa10.67□□□□□ -0.7
NUCKS1-201ENST00000367142 Q6ZQT0 140 aa10.67□□□□□ -0.7
NUCKS1-201ENST00000367142 ARHGAP32A7KAX9 2087 aa10.66□□□□□ -0.7
NUCKS1-201ENST00000367142 IGLV8-61A0A075B6I0 122 aa10.64□□□□□ -0.71
NUCKS1-201ENST00000367142 SPINT4Q6UDR6 99 aa10.63□□□□□ -0.71
NUCKS1-201ENST00000367142 DNAH10OSP0CZ25 163 aa10.63□□□□□ -0.71
NUCKS1-201ENST00000367142 TET2Q6N021 2002 aaPredicted RBP10.62□□□□□ -0.71
NUCKS1-201ENST00000367142 FAM218AQ96MZ4 157 aa10.62□□□□□ -0.71
NUCKS1-201ENST00000367142 PLXNB1O43157 2135 aa10.61□□□□□ -0.71
NUCKS1-201ENST00000367142 EML5Q05BV3 1969 aa10.6□□□□□ -0.71
NUCKS1-201ENST00000367142 TRBV7-4A0A0J9YYF1 115 aa10.6□□□□□ -0.71
NUCKS1-201ENST00000367142 A8MWP4 228 aa10.6□□□□□ -0.71
NUCKS1-201ENST00000367142 SERTAD4-AS1Q5TG53 156 aa10.6□□□□□ -0.71
NUCKS1-201ENST00000367142 MRPL34Q9BQ48 92 aaKnown RBP10.6□□□□□ -0.71
NUCKS1-201ENST00000367142 CPAMD8Q8IZJ3 1885 aa10.59□□□□□ -0.71
NUCKS1-201ENST00000367142 AGRNO00468 2067 aa10.59□□□□□ -0.71
NUCKS1-201ENST00000367142 LINC00304Q8N9R0 145 aa10.58□□□□□ -0.72
NUCKS1-201ENST00000367142 CDIP1Q9H305 208 aa10.58□□□□□ -0.72
NUCKS1-201ENST00000367142 CCDC168Q8NDH2 2452 aa10.57□□□□□ -0.72
NUCKS1-201ENST00000367142 PRO0628Q9UI54 55 aa10.56□□□□□ -0.72
NUCKS1-201ENST00000367142 FAM168BA1KXE4 195 aa10.55□□□□□ -0.72
NUCKS1-201ENST00000367142 ABCA2Q9BZC7 2435 aa10.53□□□□□ -0.72
NUCKS1-201ENST00000367142 VPREB1P12018 145 aa10.53□□□□□ -0.72
NUCKS1-201ENST00000367142 LINC01600Q96MT4 127 aa10.52□□□□□ -0.72
NUCKS1-201ENST00000367142 APLNQ9ULZ1 77 aa10.52□□□□□ -0.72
NUCKS1-201ENST00000367142 IGLV1-50A0A075B6I6 118 aa10.52□□□□□ -0.73
NUCKS1-201ENST00000367142 SSBP3-AS1Q7Z2R9 100 aa10.51□□□□□ -0.73
NUCKS1-201ENST00000367142 DSCR10P59022 87 aa10.51□□□□□ -0.73
NUCKS1-201ENST00000367142 IGLV6-57P01721 117 aa10.51□□□□□ -0.73
NUCKS1-201ENST00000367142 COL4A2P08572 1712 aa10.5□□□□□ -0.73
NUCKS1-201ENST00000367142 TM2D3Q9BRN9 247 aa10.49□□□□□ -0.73
NUCKS1-201ENST00000367142 C9orf92A6NGG3 77 aa10.49□□□□□ -0.73
NUCKS1-201ENST00000367142 CRIPTQ9P021 101 aa10.47□□□□□ -0.73
NUCKS1-201ENST00000367142 K7EIL1 84 aa10.47□□□□□ -0.73
NUCKS1-201ENST00000367142 NCOR2Q9Y618 2525 aa10.47□□□□□ -0.73
NUCKS1-201ENST00000367142 RBM12B-AS1Q9P1G2 102 aa10.47□□□□□ -0.73
NUCKS1-201ENST00000367142 K7EQZ3 153 aa10.47□□□□□ -0.73
NUCKS1-201ENST00000367142 MYO18BQ8IUG5 2567 aa10.47□□□□□ -0.73
NUCKS1-201ENST00000367142 ZNF861PO60384 105 aa10.46□□□□□ -0.73
NUCKS1-201ENST00000367142 SMCPP49901 116 aaPredicted RBP10.46□□□□□ -0.73
NUCKS1-201ENST00000367142 OBSCN-AS1Q96MR7 158 aa10.46□□□□□ -0.73
NUCKS1-201ENST00000367142 KCNQ1DNQ9H478 68 aa10.46□□□□□ -0.74
NUCKS1-201ENST00000367142 LINC00336Q6ZUF6 198 aa10.45□□□□□ -0.74
NUCKS1-201ENST00000367142 COA5Q86WW8 74 aa10.45□□□□□ -0.74
NUCKS1-201ENST00000367142 KRTAP10-11P60412 298 aa10.44□□□□□ -0.74
NUCKS1-201ENST00000367142 IGLV5-37A0A075B6J1 123 aa10.44□□□□□ -0.74
NUCKS1-201ENST00000367142 C8orf17Q9NRJ1 99 aa10.44□□□□□ -0.74
NUCKS1-201ENST00000367142 UQCR11O14957 56 aa10.44□□□□□ -0.74
NUCKS1-201ENST00000367142 DOPEY1Q5JWR5 2465 aa10.43□□□□□ -0.74
NUCKS1-201ENST00000367142 A0A087WTM6 91 aa10.42□□□□□ -0.74
NUCKS1-201ENST00000367142 IGFL1Q6UW32 110 aa10.42□□□□□ -0.74
NUCKS1-201ENST00000367142 SMR3BP02814 79 aaPredicted RBP10.41□□□□□ -0.74
NUCKS1-201ENST00000367142 RPS28P62857 69 aaKnown RBP10.41□□□□□ -0.74
NUCKS1-201ENST00000367142 A0A1B0GVX0 72 aa10.4□□□□□ -0.74
NUCKS1-201ENST00000367142 IGF2RP11717 2491 aa10.4□□□□□ -0.74
NUCKS1-201ENST00000367142 C2CD3Q4AC94 2353 aa10.4□□□□□ -0.74
NUCKS1-201ENST00000367142 C4orf26Q17RF5 130 aa10.39□□□□□ -0.75
NUCKS1-201ENST00000367142 C19orf73Q9NVV2 129 aa10.39□□□□□ -0.75
NUCKS1-201ENST00000367142 ERC2-IT1O76042 136 aa10.39□□□□□ -0.75
NUCKS1-201ENST00000367142 PRO0461Q9UI25 63 aa10.38□□□□□ -0.75
NUCKS1-201ENST00000367142 CSNK1G2-AS1Q8NCQ2 148 aa10.37□□□□□ -0.75
NUCKS1-201ENST00000367142 KLK9Q2XQG4 91 aa10.37□□□□□ -0.75
NUCKS1-201ENST00000367142 CYP4F30PQ9H0H9 118 aa10.37□□□□□ -0.75
NUCKS1-201ENST00000367142 PRR15Q8IV56 129 aa10.37□□□□□ -0.75
NUCKS1-201ENST00000367142 LINC00528Q8N1L1 170 aa10.36□□□□□ -0.75
NUCKS1-201ENST00000367142 PTPRBP23467 1997 aa10.36□□□□□ -0.75
NUCKS1-201ENST00000367142 LITAFQ99732 161 aa10.35□□□□□ -0.75
NUCKS1-201ENST00000367142 C15orf56Q8N910 161 aa10.35□□□□□ -0.75
NUCKS1-201ENST00000367142 IGLV7-43P04211 117 aa10.34□□□□□ -0.75
NUCKS1-201ENST00000367142 MIR22HGQ0VDD5 57 aa10.34□□□□□ -0.75
NUCKS1-201ENST00000367142 PIEZO1Q92508 2521 aa10.32□□□□□ -0.76
NUCKS1-201ENST00000367142 COL27A1Q8IZC6 1860 aaPredicted RBP10.32□□□□□ -0.76
NUCKS1-201ENST00000367142 PRR34Q9NV39 138 aa10.32□□□□□ -0.76
NUCKS1-201ENST00000367142 C9orf163Q8N9P6 203 aa10.31□□□□□ -0.76
NUCKS1-201ENST00000367142 PLA2G2DQ9UNK4 145 aa10.31□□□□□ -0.76
NUCKS1-201ENST00000367142 MUC4Q99102 2169 aa10.31□□□□□ -0.76
NUCKS1-201ENST00000367142 TLX1NBP0CAT3 122 aa10.3□□□□□ -0.76
NUCKS1-201ENST00000367142 C9orf129Q5T035 196 aaKnown RBP10.3□□□□□ -0.76
NUCKS1-201ENST00000367142 LINC01554Q52M75 96 aa10.29□□□□□ -0.76
NUCKS1-201ENST00000367142 A8MUN3 132 aa10.28□□□□□ -0.76
NUCKS1-201ENST00000367142 PIEZO2Q9H5I5 2752 aa10.26□□□□□ -0.77
NUCKS1-201ENST00000367142 LRRK2Q5S007 2527 aa10.26□□□□□ -0.77
NUCKS1-201ENST00000367142 Q8N377 158 aa10.24□□□□□ -0.77
NUCKS1-201ENST00000367142 PSORS1C2Q9UIG4 136 aa10.24□□□□□ -0.77
NUCKS1-201ENST00000367142 ANAPC11Q9NYG5 84 aa10.24□□□□□ -0.77
NUCKS1-201ENST00000367142 SPRR4Q96PI1 79 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms