RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 FBN2P35556 2912 aa0.8□□□□□ -2.28
RNU6-1249P-201ENST00000363237 IQGAP3Q86VI3 1631 aa0.8□□□□□ -2.28
RNU6-1249P-201ENST00000363237 COX8AP10176 69 aa0.8□□□□□ -2.28
RNU6-1249P-201ENST00000363237 GAFA1Q96PS6 74 aa0.8□□□□□ -2.28
RNU6-1249P-201ENST00000363237 CRIPTQ9P021 101 aa0.8□□□□□ -2.28
RNU6-1249P-201ENST00000363237 USP32Q8NFA0 1604 aa0.79□□□□□ -2.28
RNU6-1249P-201ENST00000363237 GOLGA4Q13439 2230 aaKnown RBP0.79□□□□□ -2.28
RNU6-1249P-201ENST00000363237 TRAV21A0A0B4J279 112 aa0.79□□□□□ -2.28
RNU6-1249P-201ENST00000363237 SPTY2D1-AS1A0A0U1RR47 76 aa0.79□□□□□ -2.28
RNU6-1249P-201ENST00000363237 COX7BP24311 80 aa0.79□□□□□ -2.28
RNU6-1249P-201ENST00000363237 TTC28Q96AY4 2481 aa0.79□□□□□ -2.28
RNU6-1249P-201ENST00000363237 TENM1Q9UKZ4 2725 aa0.79□□□□□ -2.28
RNU6-1249P-201ENST00000363237 UGGT2Q9NYU1 1516 aa0.79□□□□□ -2.28
RNU6-1249P-201ENST00000363237 FRAS1Q86XX4 4008 aa0.79□□□□□ -2.28
RNU6-1249P-201ENST00000363237 PLCE1Q9P212 2302 aa0.78□□□□□ -2.28
RNU6-1249P-201ENST00000363237 I3L3M4 83 aa0.78□□□□□ -2.28
RNU6-1249P-201ENST00000363237 RPL38P63173 70 aaKnown RBP0.78□□□□□ -2.28
RNU6-1249P-201ENST00000363237 WFDC9Q8NEX5 89 aa0.78□□□□□ -2.28
RNU6-1249P-201ENST00000363237 URB1O60287 2271 aaKnown RBP0.78□□□□□ -2.28
RNU6-1249P-201ENST00000363237 PREX1Q8TCU6 1659 aa0.78□□□□□ -2.29
RNU6-1249P-201ENST00000363237 DOT1LQ8TEK3 1739 aa0.78□□□□□ -2.29
RNU6-1249P-201ENST00000363237 CFDP00746 253 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1249P-201ENST00000363237 SMCO4Q9NRQ5 59 aa0.77□□□□□ -2.29
RNU6-1249P-201ENST00000363237 PRH1P02810 166 aa0.76□□□□□ -2.29
RNU6-1249P-201ENST00000363237 SMIM13P0DJ93 91 aa0.76□□□□□ -2.29
RNU6-1249P-201ENST00000363237 AHNAK2Q8IVF2 5795 aa0.76□□□□□ -2.29
RNU6-1249P-201ENST00000363237 DOPEY2Q9Y3R5 2298 aa0.76□□□□□ -2.29
RNU6-1249P-201ENST00000363237 USF3Q68DE3 2245 aa0.75□□□□□ -2.29
RNU6-1249P-201ENST00000363237 A0A087WXM4 84 aa0.75□□□□□ -2.29
RNU6-1249P-201ENST00000363237 IFI27P40305 119 aaPredicted RBP0.75□□□□□ -2.29
RNU6-1249P-201ENST00000363237 Q5BKY6 102 aa0.75□□□□□ -2.29
RNU6-1249P-201ENST00000363237 ZNF469Q96JG9 3925 aaPredicted RBP0.74□□□□□ -2.29
RNU6-1249P-201ENST00000363237 CLIP1P30622 1438 aa0.74□□□□□ -2.29
RNU6-1249P-201ENST00000363237 CPSF4LA6NMK7 179 aaKnown RBP0.74□□□□□ -2.29
RNU6-1249P-201ENST00000363237 UMAD1C9J7I0 102 aa0.74□□□□□ -2.29
RNU6-1249P-201ENST00000363237 PDCD5O14737 125 aa0.74□□□□□ -2.29
RNU6-1249P-201ENST00000363237 TNCP24821 2201 aa0.74□□□□□ -2.29
RNU6-1249P-201ENST00000363237 ZC3H13Q5T200 1668 aaKnown RBP0.74□□□□□ -2.29
RNU6-1249P-201ENST00000363237 NWD1Q149M9 1564 aa0.74□□□□□ -2.29
RNU6-1249P-201ENST00000363237 DNMBPQ6XZF7 1577 aa0.74□□□□□ -2.29
RNU6-1249P-201ENST00000363237 ANKRD17O75179 2603 aaKnown RBP0.73□□□□□ -2.29
RNU6-1249P-201ENST00000363237 PLCH1Q4KWH8 1693 aa0.73□□□□□ -2.29
RNU6-1249P-201ENST00000363237 KRTAP2-3P0C7H8 128 aa0.73□□□□□ -2.29
RNU6-1249P-201ENST00000363237 SPRR1BP22528 89 aa0.73□□□□□ -2.29
RNU6-1249P-201ENST00000363237 SPRR1AP35321 89 aa0.73□□□□□ -2.29
RNU6-1249P-201ENST00000363237 SMR3AQ99954 134 aa0.73□□□□□ -2.29
RNU6-1249P-201ENST00000363237 MRPL34Q9BQ48 92 aaKnown RBP0.73□□□□□ -2.29
RNU6-1249P-201ENST00000363237 KRTAP2-4Q9BYR9 128 aa0.73□□□□□ -2.29
RNU6-1249P-201ENST00000363237 KRTAP2-1Q9BYU5 128 aa0.73□□□□□ -2.29
RNU6-1249P-201ENST00000363237 CD163L1Q9NR16 1453 aa0.73□□□□□ -2.29
RNU6-1249P-201ENST00000363237 PARP4Q9UKK3 1724 aaKnown RBP0.72□□□□□ -2.29
RNU6-1249P-201ENST00000363237 NOTCH1P46531 2555 aa0.72□□□□□ -2.29
RNU6-1249P-201ENST00000363237 FBN3Q75N90 2809 aa0.72□□□□□ -2.29
RNU6-1249P-201ENST00000363237 NESP48681 1621 aa0.72□□□□□ -2.29
RNU6-1249P-201ENST00000363237 CICQ96RK0 1608 aaPredicted RBP0.72□□□□□ -2.29
RNU6-1249P-201ENST00000363237 EIF2AK4Q9P2K8 1649 aaKnown RBP0.72□□□□□ -2.29
RNU6-1249P-201ENST00000363237 CCL22O00626 93 aa0.72□□□□□ -2.29
RNU6-1249P-201ENST00000363237 IFI6P09912 130 aa0.72□□□□□ -2.29
RNU6-1249P-201ENST00000363237 C2CD3Q4AC94 2353 aa0.72□□□□□ -2.29
RNU6-1249P-201ENST00000363237 CELSR2Q9HCU4 2923 aa0.72□□□□□ -2.29
RNU6-1249P-201ENST00000363237 DUOX2Q9NRD8 1548 aa0.71□□□□□ -2.3
RNU6-1249P-201ENST00000363237 DEFA5Q01523 94 aa0.71□□□□□ -2.3
RNU6-1249P-201ENST00000363237 TNRC6CQ9HCJ0 1690 aaKnown RBP0.71□□□□□ -2.3
RNU6-1249P-201ENST00000363237 POLQO75417 2590 aa0.7□□□□□ -2.3
RNU6-1249P-201ENST00000363237 RICTORQ6R327 1708 aa0.7□□□□□ -2.3
RNU6-1249P-201ENST00000363237 DEFB109BQ30KR1 87 aa0.7□□□□□ -2.3
RNU6-1249P-201ENST00000363237 DEFB105AQ8NG35 78 aa0.7□□□□□ -2.3
RNU6-1249P-201ENST00000363237 ANKRD50Q9ULJ7 1429 aa0.7□□□□□ -2.3
RNU6-1249P-201ENST00000363237 ADAMTS12P58397 1594 aa0.7□□□□□ -2.3
RNU6-1249P-201ENST00000363237 ITSN1Q15811 1721 aa0.69□□□□□ -2.3
RNU6-1249P-201ENST00000363237 WIZO95785 1651 aa0.69□□□□□ -2.3
RNU6-1249P-201ENST00000363237 PTPRZ1P23471 2315 aaPredicted RBP0.69□□□□□ -2.3
RNU6-1249P-201ENST00000363237 CACNA1EQ15878 2313 aa0.69□□□□□ -2.3
RNU6-1249P-201ENST00000363237 LCE6AA0A183 80 aa0.69□□□□□ -2.3
RNU6-1249P-201ENST00000363237 SPINK1P00995 79 aa0.69□□□□□ -2.3
RNU6-1249P-201ENST00000363237 HMGA1P17096 107 aaKnown RBP0.69□□□□□ -2.3
RNU6-1249P-201ENST00000363237 NREPQ16612 68 aa0.69□□□□□ -2.3
RNU6-1249P-201ENST00000363237 DDX60LQ5H9U9 1706 aaKnown RBP0.69□□□□□ -2.3
RNU6-1249P-201ENST00000363237 PTPRQQ9UMZ3 2332 aa0.69□□□□□ -2.3
RNU6-1249P-201ENST00000363237 ABCA12Q86UK0 2595 aa0.68□□□□□ -2.3
RNU6-1249P-201ENST00000363237 SPTBN2O15020 2390 aa0.68□□□□□ -2.3
RNU6-1249P-201ENST00000363237 SPINK4O60575 86 aa0.67□□□□□ -2.3
RNU6-1249P-201ENST00000363237 FXYD6Q9H0Q3 95 aa0.67□□□□□ -2.3
RNU6-1249P-201ENST00000363237 LMTK2Q8IWU2 1503 aa0.67□□□□□ -2.3
RNU6-1249P-201ENST00000363237 MROH1Q8NDA8 1641 aa0.67□□□□□ -2.3
RNU6-1249P-201ENST00000363237 PIEZO2Q9H5I5 2752 aa0.67□□□□□ -2.3
RNU6-1249P-201ENST00000363237 APCP25054 2843 aa0.66□□□□□ -2.3
RNU6-1249P-201ENST00000363237 APLNQ9ULZ1 77 aa0.66□□□□□ -2.3
RNU6-1249P-201ENST00000363237 CHD9Q3L8U1 2897 aa0.65□□□□□ -2.31
RNU6-1249P-201ENST00000363237 ABCA9Q8IUA7 1624 aa0.65□□□□□ -2.31
RNU6-1249P-201ENST00000363237 COX6B2Q6YFQ2 88 aa0.65□□□□□ -2.31
RNU6-1249P-201ENST00000363237 F8P00451 2351 aa0.65□□□□□ -2.31
RNU6-1249P-201ENST00000363237 CDC42BPGQ6DT37 1551 aa0.65□□□□□ -2.31
RNU6-1249P-201ENST00000363237 NHSQ6T4R5 1651 aa0.65□□□□□ -2.31
RNU6-1249P-201ENST00000363237 BDP1A6H8Y1 2624 aa0.65□□□□□ -2.31
RNU6-1249P-201ENST00000363237 ANK2Q01484 3957 aa0.64□□□□□ -2.31
RNU6-1249P-201ENST00000363237 HEPN1Q6WQI6 88 aa0.64□□□□□ -2.31
RNU6-1249P-201ENST00000363237 C4AP0C0L4 1744 aa0.64□□□□□ -2.31
RNU6-1249P-201ENST00000363237 C4BP0C0L5 1744 aa0.64□□□□□ -2.31
RNU6-1249P-201ENST00000363237 NRAPQ86VF7 1730 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms