RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 C14orf177Q52M58 125 aa9.09□□□□□ -0.95
PDLIM5-203ENST00000359265 C9orf116Q5BN46 136 aaPredicted RBP9.09□□□□□ -0.95
PDLIM5-203ENST00000359265 Q6ZRU5 148 aa9.09□□□□□ -0.95
PDLIM5-203ENST00000359265 CARD19Q96LW7 228 aa9.09□□□□□ -0.95
PDLIM5-203ENST00000359265 LECT2O14960 151 aa9.08□□□□□ -0.96
PDLIM5-203ENST00000359265 RAB37Q96AX2 223 aa9.08□□□□□ -0.96
PDLIM5-203ENST00000359265 EIF4EBP3O60516 100 aaPredicted RBP9.07□□□□□ -0.96
PDLIM5-203ENST00000359265 CFC1BP0CG36 223 aa9.07□□□□□ -0.96
PDLIM5-203ENST00000359265 CFC1P0CG37 223 aa9.07□□□□□ -0.96
PDLIM5-203ENST00000359265 RNF151Q2KHN1 245 aa9.07□□□□□ -0.96
PDLIM5-203ENST00000359265 UBR4Q5T4S7 5183 aa9.07□□□□□ -0.96
PDLIM5-203ENST00000359265 C1orf134Q5TEV5 83 aa9.06□□□□□ -0.96
PDLIM5-203ENST00000359265 Q6ZRN7 208 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-203ENST00000359265 SND1-IT1Q9HBX3 110 aa9.06□□□□□ -0.96
PDLIM5-203ENST00000359265 PRO1854Q9UHT4 67 aa9.06□□□□□ -0.96
PDLIM5-203ENST00000359265 FAT2Q9NYQ8 4349 aa9.06□□□□□ -0.96
PDLIM5-203ENST00000359265 HSPG2P98160 4391 aa9.06□□□□□ -0.96
PDLIM5-203ENST00000359265 DNAH11Q96DT5 4516 aa9.05□□□□□ -0.96
PDLIM5-203ENST00000359265 LOC107984156A0A0G2JMH3 177 aa9.05□□□□□ -0.96
PDLIM5-203ENST00000359265 C9orf118A6NHY6 69 aa9.05□□□□□ -0.96
PDLIM5-203ENST00000359265 ARL17AQ8IVW1 177 aa9.05□□□□□ -0.96
PDLIM5-203ENST00000359265 A0A1B0GV90 55 aa9.04□□□□□ -0.96
PDLIM5-203ENST00000359265 NDUFC2-KCTD14E9PQ53 114 aa9.04□□□□□ -0.96
PDLIM5-203ENST00000359265 WFDC2Q14508 124 aa9.04□□□□□ -0.96
PDLIM5-203ENST00000359265 DNAH2Q9P225 4427 aa9.04□□□□□ -0.96
PDLIM5-203ENST00000359265 PGPEP1Q9NXJ5 209 aa9.03□□□□□ -0.96
PDLIM5-203ENST00000359265 LRCOL1A6NCL2 159 aa9.02□□□□□ -0.97
PDLIM5-203ENST00000359265 H3BUT2 72 aa9.02□□□□□ -0.97
PDLIM5-203ENST00000359265 LINC00528Q8N1L1 170 aa9.02□□□□□ -0.97
PDLIM5-203ENST00000359265 NDUFC2O95298 119 aa9.01□□□□□ -0.97
PDLIM5-203ENST00000359265 TSPAN13O95857 204 aa9.01□□□□□ -0.97
PDLIM5-203ENST00000359265 SLPIP03973 132 aa9.01□□□□□ -0.97
PDLIM5-203ENST00000359265 TLX1NBP0CAT3 122 aa9.01□□□□□ -0.97
PDLIM5-203ENST00000359265 RPL13AP40429 203 aaKnown RBP9.01□□□□□ -0.97
PDLIM5-203ENST00000359265 CNBPP62633 177 aaKnown RBP9.01□□□□□ -0.97
PDLIM5-203ENST00000359265 DNAH17Q9UFH2 4485 aa9.01□□□□□ -0.97
PDLIM5-203ENST00000359265 TRAV13-2A0A0B4J235 113 aa9□□□□□ -0.97
PDLIM5-203ENST00000359265 Q1RN00 199 aa9□□□□□ -0.97
PDLIM5-203ENST00000359265 NAA38Q9BRA0 125 aaKnown RBP9□□□□□ -0.97
PDLIM5-203ENST00000359265 RPL18AQ02543 176 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-203ENST00000359265 DNAH6Q9C0G6 4158 aa8.99□□□□□ -0.97
PDLIM5-203ENST00000359265 LOC107984640A0A0U1RRK4 108 aa8.98□□□□□ -0.97
PDLIM5-203ENST00000359265 H7C2G1 150 aa8.98□□□□□ -0.97
PDLIM5-203ENST00000359265 GAGE2EQ4V326 116 aa8.98□□□□□ -0.97
PDLIM5-203ENST00000359265 XAGE1AQ9HD64 81 aa8.98□□□□□ -0.97
PDLIM5-203ENST00000359265 GAGE2DQ9UEU5 116 aa8.98□□□□□ -0.97
PDLIM5-203ENST00000359265 PKIGQ9Y2B9 76 aa8.98□□□□□ -0.97
PDLIM5-203ENST00000359265 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.97□□□□□ -0.97
PDLIM5-203ENST00000359265 IGKV2-28A0A075B6P5 120 aa8.97□□□□□ -0.97
PDLIM5-203ENST00000359265 A0A1B0GVY2 172 aa8.97□□□□□ -0.97
PDLIM5-203ENST00000359265 A0A1W2PPM0 123 aa8.97□□□□□ -0.97
PDLIM5-203ENST00000359265 IGKV2D-28P01615 120 aa8.97□□□□□ -0.97
PDLIM5-203ENST00000359265 FABP2P12104 132 aa8.97□□□□□ -0.97
PDLIM5-203ENST00000359265 LYRM7Q5U5X0 104 aa8.97□□□□□ -0.97
PDLIM5-203ENST00000359265 Q6ZRP5 223 aa8.97□□□□□ -0.97
PDLIM5-203ENST00000359265 A0A087WTM6 91 aa8.96□□□□□ -0.98
PDLIM5-203ENST00000359265 VAMP3Q15836 100 aa8.96□□□□□ -0.98
PDLIM5-203ENST00000359265 LINC00337Q8N6G1 96 aa8.96□□□□□ -0.98
PDLIM5-203ENST00000359265 Q8N814 137 aa8.96□□□□□ -0.98
PDLIM5-203ENST00000359265 PKD1P98161 4303 aa8.95□□□□□ -0.98
PDLIM5-203ENST00000359265 PSMB2P49721 201 aa8.95□□□□□ -0.98
PDLIM5-203ENST00000359265 TRBV10-2A0A0K0K1G8 114 aa8.94□□□□□ -0.98
PDLIM5-203ENST00000359265 NCR3O14931 201 aa8.94□□□□□ -0.98
PDLIM5-203ENST00000359265 GAGE2BQ13066 116 aa8.94□□□□□ -0.98
PDLIM5-203ENST00000359265 OR13C6PQ8NH95 151 aa8.94□□□□□ -0.98
PDLIM5-203ENST00000359265 C9orf129Q5T035 196 aaKnown RBP8.93□□□□□ -0.98
PDLIM5-203ENST00000359265 Q8NDZ9 215 aa8.93□□□□□ -0.98
PDLIM5-203ENST00000359265 SPCS1Q9Y6A9 102 aa8.93□□□□□ -0.98
PDLIM5-203ENST00000359265 RTL8CO15255 209 aa8.92□□□□□ -0.98
PDLIM5-203ENST00000359265 COX6CP09669 75 aa8.92□□□□□ -0.98
PDLIM5-203ENST00000359265 VPREB1P12018 145 aa8.92□□□□□ -0.98
PDLIM5-203ENST00000359265 C9orf163Q8N9P6 203 aa8.92□□□□□ -0.98
PDLIM5-203ENST00000359265 PLA2G2DQ9UNK4 145 aa8.92□□□□□ -0.98
PDLIM5-203ENST00000359265 SCGB1C2P0DMR2 95 aa8.91□□□□□ -0.98
PDLIM5-203ENST00000359265 PRR3P79522 188 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-203ENST00000359265 S100A7L2Q5SY68 101 aa8.91□□□□□ -0.98
PDLIM5-203ENST00000359265 GTF2H5Q6ZYL4 71 aa8.91□□□□□ -0.98
PDLIM5-203ENST00000359265 TMEM126AQ9H061 195 aa8.91□□□□□ -0.98
PDLIM5-203ENST00000359265 C16orf90A8MZG2 172 aa8.9□□□□□ -0.98
PDLIM5-203ENST00000359265 K7EP34 96 aa8.9□□□□□ -0.98
PDLIM5-203ENST00000359265 TRIAP1O43715 76 aa8.9□□□□□ -0.98
PDLIM5-203ENST00000359265 GAGE10A6NGK3 116 aa8.89□□□□□ -0.99
PDLIM5-203ENST00000359265 M0R378 163 aa8.89□□□□□ -0.99
PDLIM5-203ENST00000359265 RPL28P46779 137 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-203ENST00000359265 TNP2Q05952 138 aa8.89□□□□□ -0.99
PDLIM5-203ENST00000359265 LINC00336Q6ZUF6 198 aa8.89□□□□□ -0.99
PDLIM5-203ENST00000359265 NKAPP1Q8N9T2 125 aa8.89□□□□□ -0.99
PDLIM5-203ENST00000359265 TRBV20-1A0A075B6N2 111 aa8.88□□□□□ -0.99
PDLIM5-203ENST00000359265 A0A096LNI7 61 aa8.88□□□□□ -0.99
PDLIM5-203ENST00000359265 SMIM11BQ8TCY0 68 aa8.88□□□□□ -0.99
PDLIM5-203ENST00000359265 IGLV5-37A0A075B6J1 123 aa8.87□□□□□ -0.99
PDLIM5-203ENST00000359265 UBE2V1Q13404 147 aa8.87□□□□□ -0.99
PDLIM5-203ENST00000359265 CBY1Q9Y3M2 126 aa8.87□□□□□ -0.99
PDLIM5-203ENST00000359265 IGKV2-24A0A0C4DH68 120 aa8.86□□□□□ -0.99
PDLIM5-203ENST00000359265 IGLV6-57P01721 117 aa8.86□□□□□ -0.99
PDLIM5-203ENST00000359265 SERTAD4-AS1Q5TG53 156 aa8.86□□□□□ -0.99
PDLIM5-203ENST00000359265 TRBV10-3A0A0K0K1G6 114 aa8.85□□□□□ -0.99
PDLIM5-203ENST00000359265 IGLV5-52A0A0A0MRZ9 124 aa8.84□□□□□ -0.99
PDLIM5-203ENST00000359265 TCL1BO95988 128 aa8.84□□□□□ -0.99
PDLIM5-203ENST00000359265 SDIM1Q6ZPB5 146 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms