RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 RETNLBQ9BQ08 111 aa2.88□□□□□ -1.95
SYNE2-204ENST00000358025 IGKV2-28A0A075B6P5 120 aa2.88□□□□□ -1.95
SYNE2-204ENST00000358025 IGKV2D-28P01615 120 aa2.88□□□□□ -1.95
SYNE2-204ENST00000358025 IGLV1-51P01701 117 aa2.88□□□□□ -1.95
SYNE2-204ENST00000358025 KLK12Q9UKR0 248 aa2.88□□□□□ -1.95
SYNE2-204ENST00000358025 IGF2RP11717 2491 aa2.88□□□□□ -1.95
SYNE2-204ENST00000358025 DEFB113Q30KQ7 82 aa2.88□□□□□ -1.95
SYNE2-204ENST00000358025 ZNF706Q9Y5V0 76 aaPredicted RBP2.88□□□□□ -1.95
SYNE2-204ENST00000358025 CHKB-CPT1BH3BT56 60 aa2.88□□□□□ -1.95
SYNE2-204ENST00000358025 SLPIP03973 132 aa2.88□□□□□ -1.95
SYNE2-204ENST00000358025 RANBP2P49792 3224 aaKnown RBP2.88□□□□□ -1.95
SYNE2-204ENST00000358025 ZNF702PQ9H963 129 aa2.88□□□□□ -1.95
SYNE2-204ENST00000358025 LINC00208Q96KT6 92 aa2.87□□□□□ -1.95
SYNE2-204ENST00000358025 C10orf25Q5T742 122 aa2.87□□□□□ -1.95
SYNE2-204ENST00000358025 A0A087X002 238 aa2.87□□□□□ -1.95
SYNE2-204ENST00000358025 A6NED7 52 aa2.87□□□□□ -1.95
SYNE2-204ENST00000358025 Q6ZRU5 148 aa2.87□□□□□ -1.95
SYNE2-204ENST00000358025 Q8N9L7 120 aa2.87□□□□□ -1.95
SYNE2-204ENST00000358025 KPRPQ5T749 579 aaPredicted RBP2.87□□□□□ -1.95
SYNE2-204ENST00000358025 SPTSSBQ8NFR3 76 aa2.86□□□□□ -1.95
SYNE2-204ENST00000358025 EDN2P20800 178 aa2.86□□□□□ -1.95
SYNE2-204ENST00000358025 EPM2AB3EWF7 344 aa2.86□□□□□ -1.95
SYNE2-204ENST00000358025 IL17DQ8TAD2 202 aa2.86□□□□□ -1.95
SYNE2-204ENST00000358025 C1orf137Q5JT78 98 aa2.86□□□□□ -1.95
SYNE2-204ENST00000358025 Q8NBF4 154 aa2.86□□□□□ -1.95
SYNE2-204ENST00000358025 J3QKU1 62 aa2.86□□□□□ -1.95
SYNE2-204ENST00000358025 FAM218AQ96MZ4 157 aa2.86□□□□□ -1.95
SYNE2-204ENST00000358025 IGKV2-24A0A0C4DH68 120 aa2.86□□□□□ -1.95
SYNE2-204ENST00000358025 Q6ZSN1 163 aa2.86□□□□□ -1.95
SYNE2-204ENST00000358025 IGLV4-60A0A075B6I1 120 aa2.85□□□□□ -1.95
SYNE2-204ENST00000358025 BOD1L1Q8NFC6 3051 aa2.85□□□□□ -1.95
SYNE2-204ENST00000358025 RPL37AP61513 92 aaKnown RBP2.85□□□□□ -1.95
SYNE2-204ENST00000358025 OCR1Q9BZK8 76 aa2.85□□□□□ -1.95
SYNE2-204ENST00000358025 PRR34Q9NV39 138 aa2.85□□□□□ -1.95
SYNE2-204ENST00000358025 WDFY4Q6ZS81 3184 aa2.85□□□□□ -1.95
SYNE2-204ENST00000358025 IGLV5-48A0A075B6I7 105 aa2.85□□□□□ -1.95
SYNE2-204ENST00000358025 LINC00336Q6ZUF6 198 aa2.85□□□□□ -1.95
SYNE2-204ENST00000358025 LOC100131303A0A0U1RQF7 123 aa2.85□□□□□ -1.95
SYNE2-204ENST00000358025 ACYP2P14621 99 aa2.85□□□□□ -1.95
SYNE2-204ENST00000358025 HILS1P60008 231 aa2.84□□□□□ -1.95
SYNE2-204ENST00000358025 CASC2Q6XLA1 102 aa2.84□□□□□ -1.95
SYNE2-204ENST00000358025 PLA2G2AP14555 144 aa2.84□□□□□ -1.95
SYNE2-204ENST00000358025 WFDC10AQ9H1F0 79 aa2.84□□□□□ -1.95
SYNE2-204ENST00000358025 ODF3L2Q3SX64 289 aa2.84□□□□□ -1.95
SYNE2-204ENST00000358025 A8MZ25 164 aa2.84□□□□□ -1.95
SYNE2-204ENST00000358025 LINC00612Q8N6U2 182 aa2.84□□□□□ -1.95
SYNE2-204ENST00000358025 ASH1LQ9NR48 2969 aaKnown RBP2.84□□□□□ -1.96
SYNE2-204ENST00000358025 UNQ6190/PRO20217Q6UXQ8 127 aa2.84□□□□□ -1.96
SYNE2-204ENST00000358025 Q9BRP9 147 aa2.84□□□□□ -1.96
SYNE2-204ENST00000358025 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.83□□□□□ -1.96
SYNE2-204ENST00000358025 KCNQ1DNQ9H478 68 aa2.83□□□□□ -1.96
SYNE2-204ENST00000358025 Q6ZRX8 168 aa2.83□□□□□ -1.96
SYNE2-204ENST00000358025 TM2D3Q9BRN9 247 aa2.83□□□□□ -1.96
SYNE2-204ENST00000358025 H0Y9P7 68 aa2.83□□□□□ -1.96
SYNE2-204ENST00000358025 AVPP01185 164 aa2.83□□□□□ -1.96
SYNE2-204ENST00000358025 LINC00528Q8N1L1 170 aa2.83□□□□□ -1.96
SYNE2-204ENST00000358025 ITPR1Q14643 2758 aa2.82□□□□□ -1.96
SYNE2-204ENST00000358025 XAGE1AQ9HD64 81 aa2.82□□□□□ -1.96
SYNE2-204ENST00000358025 LINC01556Q5JQF7 62 aa2.82□□□□□ -1.96
SYNE2-204ENST00000358025 KTN1-AS1Q86SY8 53 aa2.82□□□□□ -1.96
SYNE2-204ENST00000358025 C1orf64Q8NEQ6 169 aa2.82□□□□□ -1.96
SYNE2-204ENST00000358025 TLX1NBP0CAT3 122 aa2.82□□□□□ -1.96
SYNE2-204ENST00000358025 DEFB135Q30KP9 77 aa2.82□□□□□ -1.96
SYNE2-204ENST00000358025 Q5XG85 94 aa2.82□□□□□ -1.96
SYNE2-204ENST00000358025 A8MWP4 228 aa2.82□□□□□ -1.96
SYNE2-204ENST00000358025 KIAA0087Q14695 138 aa2.82□□□□□ -1.96
SYNE2-204ENST00000358025 REG3GQ6UW15 175 aa2.82□□□□□ -1.96
SYNE2-204ENST00000358025 SPINK6Q6UWN8 80 aa2.82□□□□□ -1.96
SYNE2-204ENST00000358025 SCXQ7RTU7 201 aa2.82□□□□□ -1.96
SYNE2-204ENST00000358025 PRM2P04554 102 aa2.81□□□□□ -1.96
SYNE2-204ENST00000358025 CENPEQ02224 2701 aa2.81□□□□□ -1.96
SYNE2-204ENST00000358025 DNAJC9-AS1A6NH13 148 aa2.81□□□□□ -1.96
SYNE2-204ENST00000358025 C19orf84I3L1E1 186 aa2.81□□□□□ -1.96
SYNE2-204ENST00000358025 C4orf48Q5BLP8 95 aa2.81□□□□□ -1.96
SYNE2-204ENST00000358025 ZNF843Q8N446 348 aa2.81□□□□□ -1.96
SYNE2-204ENST00000358025 LRBAP50851 2863 aa2.81□□□□□ -1.96
SYNE2-204ENST00000358025 A0A087WVE0 104 aa2.81□□□□□ -1.96
SYNE2-204ENST00000358025 C8orf87E5RJ46 101 aa2.81□□□□□ -1.96
SYNE2-204ENST00000358025 Q6ZRP5 223 aa2.81□□□□□ -1.96
SYNE2-204ENST00000358025 IGKV4-1P06312 121 aa2.81□□□□□ -1.96
SYNE2-204ENST00000358025 LINC01006Q8NI28 216 aa2.81□□□□□ -1.96
SYNE2-204ENST00000358025 SPRR4Q96PI1 79 aa2.8□□□□□ -1.96
SYNE2-204ENST00000358025 COL12A1Q99715 3063 aa2.8□□□□□ -1.96
SYNE2-204ENST00000358025 FASNP49327 2511 aaKnown RBP2.8□□□□□ -1.96
SYNE2-204ENST00000358025 IGLV5-37A0A075B6J1 123 aa2.8□□□□□ -1.96
SYNE2-204ENST00000358025 TRAV10A0A0B4J240 114 aa2.8□□□□□ -1.96
SYNE2-204ENST00000358025 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.8□□□□□ -1.96
SYNE2-204ENST00000358025 ZNF292O60281 2723 aa2.8□□□□□ -1.96
SYNE2-204ENST00000358025 H0Y9J4 135 aa2.8□□□□□ -1.96
SYNE2-204ENST00000358025 PHF5AQ7RTV0 110 aaKnown RBP2.8□□□□□ -1.96
SYNE2-204ENST00000358025 INAFM1C9JVW0 142 aa2.8□□□□□ -1.96
SYNE2-204ENST00000358025 SMR3AQ99954 134 aa2.8□□□□□ -1.96
SYNE2-204ENST00000358025 BBC3Q96PG8 261 aaPredicted RBP2.8□□□□□ -1.96
SYNE2-204ENST00000358025 DNAH10OSP0CZ25 163 aa2.79□□□□□ -1.96
SYNE2-204ENST00000358025 LOC101927531A0A1B0GV80 90 aa2.79□□□□□ -1.96
SYNE2-204ENST00000358025 PRR3P79522 188 aaKnown RBP2.79□□□□□ -1.96
SYNE2-204ENST00000358025 FSHBP01225 129 aa2.79□□□□□ -1.96
SYNE2-204ENST00000358025 MDFIQ99750 246 aa2.79□□□□□ -1.96
SYNE2-204ENST00000358025 USP24Q9UPU5 2620 aa2.79□□□□□ -1.96
SYNE2-204ENST00000358025 TRAV22A0A0B4J277 110 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms