RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 IGLV5-39A0A0G2JS06 123 aa8.33□□□□□ -1.08
COL9A1-202ENST00000357250 SERP1Q9Y6X1 66 aa8.32□□□□□ -1.08
COL9A1-202ENST00000357250 A0A087WYN8 130 aa8.32□□□□□ -1.08
COL9A1-202ENST00000357250 MUC4Q99102 2169 aa8.32□□□□□ -1.08
COL9A1-202ENST00000357250 SPINK6Q6UWN8 80 aa8.31□□□□□ -1.08
COL9A1-202ENST00000357250 FAM19A4Q96LR4 140 aa8.31□□□□□ -1.08
COL9A1-202ENST00000357250 Q6ZSN1 163 aa8.31□□□□□ -1.08
COL9A1-202ENST00000357250 TEP1Q99973 2627 aaKnown RBP8.31□□□□□ -1.08
COL9A1-202ENST00000357250 C9orf116Q5BN46 136 aaPredicted RBP8.31□□□□□ -1.08
COL9A1-202ENST00000357250 LINC00575Q6W349 94 aa8.3□□□□□ -1.08
COL9A1-202ENST00000357250 C6orf223Q8N319 242 aa8.3□□□□□ -1.08
COL9A1-202ENST00000357250 Q6ZTC4 211 aa8.3□□□□□ -1.08
COL9A1-202ENST00000357250 C11orf72Q8NBR9 251 aa8.3□□□□□ -1.08
COL9A1-202ENST00000357250 LYPD5Q6UWN5 251 aa8.29□□□□□ -1.08
COL9A1-202ENST00000357250 IGLV9-49A0A0B4J1Y8 123 aa8.28□□□□□ -1.08
COL9A1-202ENST00000357250 LINC00315P59091 139 aa8.28□□□□□ -1.08
COL9A1-202ENST00000357250 DMXL2Q8TDJ6 3036 aa8.28□□□□□ -1.08
COL9A1-202ENST00000357250 ATMQ13315 3056 aa8.27□□□□□ -1.09
COL9A1-202ENST00000357250 A6NED7 52 aa8.27□□□□□ -1.09
COL9A1-202ENST00000357250 Q8N3U1 123 aa8.27□□□□□ -1.09
COL9A1-202ENST00000357250 ADGRG4Q8IZF6 3080 aa8.27□□□□□ -1.09
COL9A1-202ENST00000357250 M0R2N4 97 aa8.27□□□□□ -1.09
COL9A1-202ENST00000357250 FAM30AQ9NZY2 134 aa8.27□□□□□ -1.09
COL9A1-202ENST00000357250 IGLV5-45A0A087WSX0 123 aa8.26□□□□□ -1.09
COL9A1-202ENST00000357250 IGHV3OR16-9A0A0B4J2B5 98 aa8.26□□□□□ -1.09
COL9A1-202ENST00000357250 TRBV7-7A0A0K0K1E9 115 aa8.26□□□□□ -1.09
COL9A1-202ENST00000357250 A0A1B0GW54 56 aa8.26□□□□□ -1.09
COL9A1-202ENST00000357250 KLK9Q2XQG4 91 aa8.26□□□□□ -1.09
COL9A1-202ENST00000357250 LY6G6CO95867 125 aa8.25□□□□□ -1.09
COL9A1-202ENST00000357250 PRR3P79522 188 aaKnown RBP8.25□□□□□ -1.09
COL9A1-202ENST00000357250 CXCL6P80162 114 aa8.25□□□□□ -1.09
COL9A1-202ENST00000357250 LINC00337Q8N6G1 96 aa8.25□□□□□ -1.09
COL9A1-202ENST00000357250 BCE1O60756 84 aa8.25□□□□□ -1.09
COL9A1-202ENST00000357250 RETNQ9HD89 108 aa8.25□□□□□ -1.09
COL9A1-202ENST00000357250 LINC00208Q96KT6 92 aa8.24□□□□□ -1.09
COL9A1-202ENST00000357250 CFAP47Q6ZTR5 3102 aa8.24□□□□□ -1.09
COL9A1-202ENST00000357250 Q6ZVQ6 151 aa8.24□□□□□ -1.09
COL9A1-202ENST00000357250 CELA1Q9UNI1 258 aa8.24□□□□□ -1.09
COL9A1-202ENST00000357250 A0A087WVE0 104 aa8.23□□□□□ -1.09
COL9A1-202ENST00000357250 H3BNG1 76 aa8.23□□□□□ -1.09
COL9A1-202ENST00000357250 HRCT1Q6UXD1 115 aa8.23□□□□□ -1.09
COL9A1-202ENST00000357250 Q9BRP9 147 aa8.23□□□□□ -1.09
COL9A1-202ENST00000357250 FHL3Q13643 280 aa8.22□□□□□ -1.09
COL9A1-202ENST00000357250 TRBV7-6A0A0J9YX20 115 aa8.22□□□□□ -1.09
COL9A1-202ENST00000357250 ZZEF1O43149 2961 aa8.22□□□□□ -1.09
COL9A1-202ENST00000357250 NHLRC4P0CG21 123 aaPredicted RBP8.22□□□□□ -1.09
COL9A1-202ENST00000357250 ESRGQ1W209 222 aa8.21□□□□□ -1.09
COL9A1-202ENST00000357250 LINC01556Q5JQF7 62 aa8.21□□□□□ -1.09
COL9A1-202ENST00000357250 LINC00846Q9NV44 126 aa8.21□□□□□ -1.09
COL9A1-202ENST00000357250 PRR4Q16378 134 aa8.21□□□□□ -1.1
COL9A1-202ENST00000357250 Q6ZRU5 148 aa8.21□□□□□ -1.1
COL9A1-202ENST00000357250 COL27A1Q8IZC6 1860 aaPredicted RBP8.21□□□□□ -1.1
COL9A1-202ENST00000357250 COL12A1Q99715 3063 aa8.2□□□□□ -1.1
COL9A1-202ENST00000357250 LINC01547P58512 204 aaPredicted RBP8.2□□□□□ -1.1
COL9A1-202ENST00000357250 IGLV5-52A0A0A0MRZ9 124 aa8.2□□□□□ -1.1
COL9A1-202ENST00000357250 A0A0U1RQV1 116 aa8.19□□□□□ -1.1
COL9A1-202ENST00000357250 A0A087WSZ3 146 aa8.19□□□□□ -1.1
COL9A1-202ENST00000357250 CHD6Q8TD26 2715 aa8.19□□□□□ -1.1
COL9A1-202ENST00000357250 hDV103S1A0JD37 113 aa8.19□□□□□ -1.1
COL9A1-202ENST00000357250 TMEM254Q8TBM7 123 aa8.19□□□□□ -1.1
COL9A1-202ENST00000357250 TNRC18O15417 2968 aaPredicted RBP8.19□□□□□ -1.1
COL9A1-202ENST00000357250 CDIP1Q9H305 208 aa8.18□□□□□ -1.1
COL9A1-202ENST00000357250 HCG22E2RYF7 251 aa8.17□□□□□ -1.1
COL9A1-202ENST00000357250 FLNCQ14315 2725 aa8.17□□□□□ -1.1
COL9A1-202ENST00000357250 IGSF10Q6WRI0 2623 aa8.17□□□□□ -1.1
COL9A1-202ENST00000357250 DMXL1Q9Y485 3027 aa8.16□□□□□ -1.1
COL9A1-202ENST00000357250 TACC2O95359 2948 aa8.16□□□□□ -1.1
COL9A1-202ENST00000357250 LOC400499M0QZD8 3231 aa8.15□□□□□ -1.1
COL9A1-202ENST00000357250 C22orf24Q9Y442 160 aa8.15□□□□□ -1.1
COL9A1-202ENST00000357250 IGHV6-1A0A0B4J1U7 121 aa8.15□□□□□ -1.1
COL9A1-202ENST00000357250 C1orf134Q5TEV5 83 aa8.15□□□□□ -1.1
COL9A1-202ENST00000357250 CIRBP-AS1Q8TBR5 109 aa8.15□□□□□ -1.1
COL9A1-202ENST00000357250 C1orf195Q5TG92 126 aa8.15□□□□□ -1.1
COL9A1-202ENST00000357250 H0Y9P7 68 aa8.15□□□□□ -1.11
COL9A1-202ENST00000357250 SBSPONQ8IVN8 264 aa8.14□□□□□ -1.11
COL9A1-202ENST00000357250 LIMD2Q9BT23 127 aa8.14□□□□□ -1.11
COL9A1-202ENST00000357250 KALRNO60229 2985 aa8.14□□□□□ -1.11
COL9A1-202ENST00000357250 PRO0461Q9UI25 63 aa8.13□□□□□ -1.11
COL9A1-202ENST00000357250 SMCR5Q8TEV8 140 aa8.13□□□□□ -1.11
COL9A1-202ENST00000357250 SPATA3Q8NHX4 192 aa8.12□□□□□ -1.11
COL9A1-202ENST00000357250 Q9UF83 564 aa8.12□□□□□ -1.11
COL9A1-202ENST00000357250 TEX15Q9BXT5 2789 aa8.11□□□□□ -1.11
COL9A1-202ENST00000357250 CRYGAP11844 174 aa8.11□□□□□ -1.11
COL9A1-202ENST00000357250 SMCPP49901 116 aaPredicted RBP8.11□□□□□ -1.11
COL9A1-202ENST00000357250 TP53AIP1Q9HCN2 124 aa8.11□□□□□ -1.11
COL9A1-202ENST00000357250 X6R8D5 127 aa8.11□□□□□ -1.11
COL9A1-202ENST00000357250 FSHBP01225 129 aa8.1□□□□□ -1.11
COL9A1-202ENST00000357250 C6orf48Q9UBA6 75 aa8.1□□□□□ -1.11
COL9A1-202ENST00000357250 SETXQ7Z333 2677 aaKnown RBP8.1□□□□□ -1.11
COL9A1-202ENST00000357250 ELOF1P60002 83 aaKnown RBP8.1□□□□□ -1.11
COL9A1-202ENST00000357250 USP34Q70CQ2 3546 aa8.1□□□□□ -1.11
COL9A1-202ENST00000357250 LOC110117498A0A087WWA1 95 aa8.1□□□□□ -1.11
COL9A1-202ENST00000357250 A8MTW9 85 aa8.1□□□□□ -1.11
COL9A1-202ENST00000357250 KIAA0087Q14695 138 aa8.09□□□□□ -1.11
COL9A1-202ENST00000357250 SOSTDC1Q6X4U4 206 aa8.09□□□□□ -1.12
COL9A1-202ENST00000357250 H3BPC8 53 aa8.08□□□□□ -1.12
COL9A1-202ENST00000357250 PRLHP81277 87 aa8.08□□□□□ -1.12
COL9A1-202ENST00000357250 GVQW2A0A096LPI5 108 aaPredicted RBP8.08□□□□□ -1.12
COL9A1-202ENST00000357250 LINC00167Q96N53 147 aa8.07□□□□□ -1.12
COL9A1-202ENST00000357250 PMAIP1Q13794 54 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms