RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 FAM19A3Q7Z5A8 133 aa8.5□□□□□ -1.05
COLCA1-201ENST00000355430 Q6ZVQ6 151 aa8.5□□□□□ -1.05
COLCA1-201ENST00000355430 FAM229AH3BQW9 127 aa8.5□□□□□ -1.05
COLCA1-201ENST00000355430 LINC01556Q5JQF7 62 aa8.49□□□□□ -1.05
COLCA1-201ENST00000355430 C2orf48Q96LS8 159 aa8.49□□□□□ -1.05
COLCA1-201ENST00000355430 FAM30AQ9NZY2 134 aa8.49□□□□□ -1.05
COLCA1-201ENST00000355430 Q8N3U1 123 aa8.49□□□□□ -1.05
COLCA1-201ENST00000355430 ATP5EP56381 51 aaPredicted RBP8.49□□□□□ -1.05
COLCA1-201ENST00000355430 LINC01547P58512 204 aaPredicted RBP8.48□□□□□ -1.05
COLCA1-201ENST00000355430 C1orf137Q5JT78 98 aa8.48□□□□□ -1.05
COLCA1-201ENST00000355430 LAMA1P25391 3075 aa8.48□□□□□ -1.05
COLCA1-201ENST00000355430 X6R8D5 127 aa8.47□□□□□ -1.05
COLCA1-201ENST00000355430 K7EIL1 84 aa8.47□□□□□ -1.05
COLCA1-201ENST00000355430 SERP1Q9Y6X1 66 aa8.47□□□□□ -1.05
COLCA1-201ENST00000355430 VCANP13611 3396 aa8.46□□□□□ -1.05
COLCA1-201ENST00000355430 IGLV9-49A0A0B4J1Y8 123 aa8.46□□□□□ -1.05
COLCA1-201ENST00000355430 CRYGAP11844 174 aa8.46□□□□□ -1.05
COLCA1-201ENST00000355430 ESRGQ1W209 222 aa8.46□□□□□ -1.05
COLCA1-201ENST00000355430 NBDYA0A0U1RRE5 68 aa8.46□□□□□ -1.05
COLCA1-201ENST00000355430 C16orf90A8MZG2 172 aa8.46□□□□□ -1.05
COLCA1-201ENST00000355430 KRTAP1-3Q8IUG1 177 aa8.46□□□□□ -1.06
COLCA1-201ENST00000355430 REG3GQ6UW15 175 aa8.45□□□□□ -1.06
COLCA1-201ENST00000355430 A0A0U1RQV1 116 aa8.45□□□□□ -1.06
COLCA1-201ENST00000355430 WFDC13Q8IUB5 93 aa8.45□□□□□ -1.06
COLCA1-201ENST00000355430 PRR4Q16378 134 aa8.43□□□□□ -1.06
COLCA1-201ENST00000355430 C10orf25Q5T742 122 aa8.43□□□□□ -1.06
COLCA1-201ENST00000355430 CHKB-CPT1BH3BT56 60 aa8.43□□□□□ -1.06
COLCA1-201ENST00000355430 SPINK6Q6UWN8 80 aa8.43□□□□□ -1.06
COLCA1-201ENST00000355430 Q6ZRU5 148 aa8.43□□□□□ -1.06
COLCA1-201ENST00000355430 SVIPQ8NHG7 77 aa8.43□□□□□ -1.06
COLCA1-201ENST00000355430 SMIM26A0A096LP01 95 aa8.43□□□□□ -1.06
COLCA1-201ENST00000355430 Q8NAQ8 132 aa8.43□□□□□ -1.06
COLCA1-201ENST00000355430 KRTAP10-11P60412 298 aa8.41□□□□□ -1.06
COLCA1-201ENST00000355430 Q8N9L7 120 aa8.4□□□□□ -1.06
COLCA1-201ENST00000355430 KRTAP1-1Q07627 177 aa8.4□□□□□ -1.07
COLCA1-201ENST00000355430 C6orf48Q9UBA6 75 aa8.4□□□□□ -1.07
COLCA1-201ENST00000355430 CELSR3Q9NYQ7 3312 aa8.39□□□□□ -1.07
COLCA1-201ENST00000355430 PRYO14603 147 aa8.39□□□□□ -1.07
COLCA1-201ENST00000355430 CXCL6P80162 114 aa8.39□□□□□ -1.07
COLCA1-201ENST00000355430 MRPL55Q7Z7F7 128 aaKnown RBP8.39□□□□□ -1.07
COLCA1-201ENST00000355430 Q6ZQT0 140 aa8.39□□□□□ -1.07
COLCA1-201ENST00000355430 IGKV4-1P06312 121 aa8.38□□□□□ -1.07
COLCA1-201ENST00000355430 CIRBP-AS1Q8TBR5 109 aa8.38□□□□□ -1.07
COLCA1-201ENST00000355430 VPS13AQ96RL7 3174 aa8.38□□□□□ -1.07
COLCA1-201ENST00000355430 C19orf73Q9NVV2 129 aa8.37□□□□□ -1.07
COLCA1-201ENST00000355430 TMEM254Q8TBM7 123 aa8.37□□□□□ -1.07
COLCA1-201ENST00000355430 RTL8CO15255 209 aa8.36□□□□□ -1.07
COLCA1-201ENST00000355430 PLA2G1BP04054 148 aaKnown RBP8.36□□□□□ -1.07
COLCA1-201ENST00000355430 KRTAP10-3P60369 221 aa8.36□□□□□ -1.07
COLCA1-201ENST00000355430 LINC00588Q9Y4M8 146 aa8.36□□□□□ -1.07
COLCA1-201ENST00000355430 CSNK1G2-AS1Q8NCQ2 148 aa8.35□□□□□ -1.07
COLCA1-201ENST00000355430 LOC110117498A0A087WWA1 95 aa8.34□□□□□ -1.07
COLCA1-201ENST00000355430 FAM104AQ969W3 186 aa8.33□□□□□ -1.08
COLCA1-201ENST00000355430 HELZ2Q9BYK8 2649 aaKnown RBP8.33□□□□□ -1.08
COLCA1-201ENST00000355430 J3QL48 77 aa8.33□□□□□ -1.08
COLCA1-201ENST00000355430 GIG44P09565 113 aaPredicted RBP8.33□□□□□ -1.08
COLCA1-201ENST00000355430 WDFY4Q6ZS81 3184 aa8.33□□□□□ -1.08
COLCA1-201ENST00000355430 ELOF1P60002 83 aaKnown RBP8.33□□□□□ -1.08
COLCA1-201ENST00000355430 CASC2Q6XLA1 102 aa8.33□□□□□ -1.08
COLCA1-201ENST00000355430 RPS28P62857 69 aaKnown RBP8.32□□□□□ -1.08
COLCA1-201ENST00000355430 KIAA0087Q14695 138 aa8.32□□□□□ -1.08
COLCA1-201ENST00000355430 C9orf129Q5T035 196 aaKnown RBP8.32□□□□□ -1.08
COLCA1-201ENST00000355430 SPTBN5Q9NRC6 3674 aaKnown RBP8.32□□□□□ -1.08
COLCA1-201ENST00000355430 TRBV7-6A0A0J9YX20 115 aa8.32□□□□□ -1.08
COLCA1-201ENST00000355430 C4orf26Q17RF5 130 aa8.32□□□□□ -1.08
COLCA1-201ENST00000355430 MGAQ8IWI9 3026 aa8.32□□□□□ -1.08
COLCA1-201ENST00000355430 SPTSSBQ8NFR3 76 aa8.32□□□□□ -1.08
COLCA1-201ENST00000355430 LIMD2Q9BT23 127 aa8.32□□□□□ -1.08
COLCA1-201ENST00000355430 DEFB116Q30KQ4 102 aa8.31□□□□□ -1.08
COLCA1-201ENST00000355430 TM2D3Q9BRN9 247 aa8.31□□□□□ -1.08
COLCA1-201ENST00000355430 SPEGQ15772 3267 aa8.3□□□□□ -1.08
COLCA1-201ENST00000355430 LINC00336Q6ZUF6 198 aa8.3□□□□□ -1.08
COLCA1-201ENST00000355430 SMIM29Q86T20 159 aa8.28□□□□□ -1.08
COLCA1-201ENST00000355430 C22orf24Q9Y442 160 aa8.28□□□□□ -1.08
COLCA1-201ENST00000355430 BCE1O60756 84 aa8.28□□□□□ -1.08
COLCA1-201ENST00000355430 LINC00208Q96KT6 92 aa8.28□□□□□ -1.08
COLCA1-201ENST00000355430 IGLV6-57P01721 117 aa8.28□□□□□ -1.08
COLCA1-201ENST00000355430 SEC61GP60059 68 aa8.28□□□□□ -1.08
COLCA1-201ENST00000355430 V9GYY9 64 aa8.27□□□□□ -1.09
COLCA1-201ENST00000355430 DNAH10OSP0CZ25 163 aa8.27□□□□□ -1.09
COLCA1-201ENST00000355430 Q6ZRP5 223 aa8.27□□□□□ -1.09
COLCA1-201ENST00000355430 LINC01600Q96MT4 127 aa8.27□□□□□ -1.09
COLCA1-201ENST00000355430 Q9BRP9 147 aa8.27□□□□□ -1.09
COLCA1-201ENST00000355430 A0A087WSZ3 146 aa8.27□□□□□ -1.09
COLCA1-201ENST00000355430 REV3LO60673 3130 aa8.26□□□□□ -1.09
COLCA1-201ENST00000355430 C1orf195Q5TG92 126 aa8.25□□□□□ -1.09
COLCA1-201ENST00000355430 PRLHP81277 87 aa8.25□□□□□ -1.09
COLCA1-201ENST00000355430 DSPP15924 2871 aaKnown RBP8.25□□□□□ -1.09
COLCA1-201ENST00000355430 HCG22E2RYF7 251 aa8.24□□□□□ -1.09
COLCA1-201ENST00000355430 GVQW2A0A096LPI5 108 aaPredicted RBP8.24□□□□□ -1.09
COLCA1-201ENST00000355430 LINC00167Q96N53 147 aa8.24□□□□□ -1.09
COLCA1-201ENST00000355430 VPREB1P12018 145 aa8.22□□□□□ -1.09
COLCA1-201ENST00000355430 RPL37AP61513 92 aaKnown RBP8.22□□□□□ -1.09
COLCA1-201ENST00000355430 PSPHP1O15172 72 aa8.22□□□□□ -1.09
COLCA1-201ENST00000355430 FRYLO94915 3013 aa8.21□□□□□ -1.09
COLCA1-201ENST00000355430 ST20-AS1Q8NBB2 130 aa8.2□□□□□ -1.1
COLCA1-201ENST00000355430 NBEAQ8NFP9 2946 aa8.2□□□□□ -1.1
COLCA1-201ENST00000355430 A6NED7 52 aa8.19□□□□□ -1.1
COLCA1-201ENST00000355430 H0Y9P7 68 aa8.19□□□□□ -1.1
COLCA1-201ENST00000355430 LINC00612Q8N6U2 182 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms