RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 BAGE3Q86Y29 109 aa3.43□□□□□ -1.86
VCAM1-202ENST00000347652 LINC00588Q9Y4M8 146 aa3.43□□□□□ -1.86
VCAM1-202ENST00000347652 DNAH2Q9P225 4427 aa3.43□□□□□ -1.86
VCAM1-202ENST00000347652 IGLV8-61A0A075B6I0 122 aa3.43□□□□□ -1.86
VCAM1-202ENST00000347652 TRBV25-1A0A075B6N4 114 aa3.43□□□□□ -1.86
VCAM1-202ENST00000347652 SOSTDC1Q6X4U4 206 aa3.43□□□□□ -1.86
VCAM1-202ENST00000347652 C7orf33Q8WU49 177 aa3.43□□□□□ -1.86
VCAM1-202ENST00000347652 CHCHD1Q96BP2 118 aaKnown RBP3.43□□□□□ -1.86
VCAM1-202ENST00000347652 DSCR8Q96T75 97 aa3.43□□□□□ -1.86
VCAM1-202ENST00000347652 VAMP8Q9BV40 100 aa3.43□□□□□ -1.86
VCAM1-202ENST00000347652 NUPR1O60356 82 aa3.43□□□□□ -1.86
VCAM1-202ENST00000347652 CCL18P55774 89 aa3.43□□□□□ -1.86
VCAM1-202ENST00000347652 UPK3BQ9BT76 320 aa3.43□□□□□ -1.86
VCAM1-202ENST00000347652 DNAH10Q8IVF4 4471 aa3.42□□□□□ -1.86
VCAM1-202ENST00000347652 H7C423 109 aa3.42□□□□□ -1.86
VCAM1-202ENST00000347652 SERF1AO75920 110 aa3.42□□□□□ -1.86
VCAM1-202ENST00000347652 ATOH7Q8N100 152 aa3.42□□□□□ -1.86
VCAM1-202ENST00000347652 CHCHD5Q9BSY4 110 aa3.42□□□□□ -1.86
VCAM1-202ENST00000347652 DNAH6Q9C0G6 4158 aa3.42□□□□□ -1.86
VCAM1-202ENST00000347652 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.42□□□□□ -1.86
VCAM1-202ENST00000347652 A0A096LNJ9 63 aa3.42□□□□□ -1.86
VCAM1-202ENST00000347652 IGKV2-29A2NJV5 120 aaPredicted RBP3.42□□□□□ -1.86
VCAM1-202ENST00000347652 LUZP6Q538Z0 58 aa3.42□□□□□ -1.86
VCAM1-202ENST00000347652 LEPROTO15243 131 aa3.41□□□□□ -1.86
VCAM1-202ENST00000347652 CXCL5P42830 114 aa3.41□□□□□ -1.86
VCAM1-202ENST00000347652 RPL39P62891 51 aaKnown RBP3.41□□□□□ -1.86
VCAM1-202ENST00000347652 SMIM29Q86T20 159 aa3.41□□□□□ -1.86
VCAM1-202ENST00000347652 WFDC10BQ8IUB3 73 aa3.41□□□□□ -1.86
VCAM1-202ENST00000347652 KRTAP3-1Q9BYR8 98 aa3.41□□□□□ -1.86
VCAM1-202ENST00000347652 PMCHL1Q16048 86 aa3.41□□□□□ -1.86
VCAM1-202ENST00000347652 UBE2D4Q9Y2X8 147 aa3.41□□□□□ -1.86
VCAM1-202ENST00000347652 A0A1B0GUV1 79 aa3.4□□□□□ -1.86
VCAM1-202ENST00000347652 TMEM262E9PQX1 116 aa3.4□□□□□ -1.86
VCAM1-202ENST00000347652 HBDP02042 147 aa3.4□□□□□ -1.86
VCAM1-202ENST00000347652 DNAH10OSP0CZ25 163 aa3.4□□□□□ -1.86
VCAM1-202ENST00000347652 C2orf66Q6UXQ4 117 aa3.4□□□□□ -1.86
VCAM1-202ENST00000347652 UBE2DNLQ8IWF7 75 aa3.4□□□□□ -1.86
VCAM1-202ENST00000347652 FAM19A2Q8N3H0 131 aa3.4□□□□□ -1.86
VCAM1-202ENST00000347652 TIMM21Q9BVV7 248 aa3.4□□□□□ -1.86
VCAM1-202ENST00000347652 LINC01549A6NIU2 74 aa3.4□□□□□ -1.87
VCAM1-202ENST00000347652 IGIPA6NJ69 53 aa3.4□□□□□ -1.87
VCAM1-202ENST00000347652 TMEM258P61165 79 aa3.4□□□□□ -1.87
VCAM1-202ENST00000347652 LINC01556Q5JQF7 62 aa3.4□□□□□ -1.87
VCAM1-202ENST00000347652 TEN1Q86WV5 123 aa3.4□□□□□ -1.87
VCAM1-202ENST00000347652 Q8N3U1 123 aa3.4□□□□□ -1.87
VCAM1-202ENST00000347652 A6NED7 52 aa3.39□□□□□ -1.87
VCAM1-202ENST00000347652 M0R2N4 97 aa3.39□□□□□ -1.87
VCAM1-202ENST00000347652 HERVK_113P61574 105 aa3.39□□□□□ -1.87
VCAM1-202ENST00000347652 UBE2BP63146 152 aa3.39□□□□□ -1.87
VCAM1-202ENST00000347652 PHF5AQ7RTV0 110 aaKnown RBP3.39□□□□□ -1.87
VCAM1-202ENST00000347652 IGLV4-60A0A075B6I1 120 aa3.39□□□□□ -1.87
VCAM1-202ENST00000347652 IGHV3-30P01768 117 aa3.39□□□□□ -1.87
VCAM1-202ENST00000347652 IGHV3-33P01772 117 aa3.39□□□□□ -1.87
VCAM1-202ENST00000347652 IGHV3-30-3P0DP02 117 aa3.39□□□□□ -1.87
VCAM1-202ENST00000347652 IGHV3-30-5P0DP03 117 aa3.39□□□□□ -1.87
VCAM1-202ENST00000347652 MRPS36P82909 103 aaKnown RBP3.39□□□□□ -1.87
VCAM1-202ENST00000347652 CEND1Q8N111 149 aa3.39□□□□□ -1.87
VCAM1-202ENST00000347652 HIST3H2BBQ8N257 126 aa3.39□□□□□ -1.87
VCAM1-202ENST00000347652 Q8N976 141 aa3.39□□□□□ -1.87
VCAM1-202ENST00000347652 TMEM141Q96I45 108 aa3.39□□□□□ -1.87
VCAM1-202ENST00000347652 SCGB3A1Q96QR1 104 aa3.39□□□□□ -1.87
VCAM1-202ENST00000347652 CDC42SE2Q9NRR3 84 aa3.39□□□□□ -1.87
VCAM1-202ENST00000347652 FAT2Q9NYQ8 4349 aa3.39□□□□□ -1.87
VCAM1-202ENST00000347652 OPRPNQ99935 248 aaPredicted RBP3.38□□□□□ -1.87
VCAM1-202ENST00000347652 EPM2AB3EWF7 344 aa3.38□□□□□ -1.87
VCAM1-202ENST00000347652 LEPROTL1O95214 131 aa3.38□□□□□ -1.87
VCAM1-202ENST00000347652 TSPEAR-AS2P59090 65 aa3.38□□□□□ -1.87
VCAM1-202ENST00000347652 Q8N1X5 172 aa3.38□□□□□ -1.87
VCAM1-202ENST00000347652 HECTD4Q9Y4D8 3996 aa3.38□□□□□ -1.87
VCAM1-202ENST00000347652 IBA57-AS1B1ANH7 110 aa3.38□□□□□ -1.87
VCAM1-202ENST00000347652 RNASE13Q5GAN3 156 aaKnown RBP3.38□□□□□ -1.87
VCAM1-202ENST00000347652 FP248Q71RG6 208 aaPredicted RBP3.38□□□□□ -1.87
VCAM1-202ENST00000347652 AMELXQ99217 191 aa3.38□□□□□ -1.87
VCAM1-202ENST00000347652 PKHD1P08F94 4074 aa3.37□□□□□ -1.87
VCAM1-202ENST00000347652 H3BT86 120 aa3.37□□□□□ -1.87
VCAM1-202ENST00000347652 ANGP03950 147 aaKnown RBP3.37□□□□□ -1.87
VCAM1-202ENST00000347652 FABP4P15090 132 aa3.37□□□□□ -1.87
VCAM1-202ENST00000347652 ENHOQ6UWT2 76 aa3.37□□□□□ -1.87
VCAM1-202ENST00000347652 LINC00269Q8N2A0 174 aa3.37□□□□□ -1.87
VCAM1-202ENST00000347652 IFI27L1Q96BM0 104 aa3.37□□□□□ -1.87
VCAM1-202ENST00000347652 LINC00526Q96FQ7 95 aa3.37□□□□□ -1.87
VCAM1-202ENST00000347652 KRTAP1-5Q9BYS1 174 aa3.37□□□□□ -1.87
VCAM1-202ENST00000347652 PRR34Q9NV39 138 aa3.37□□□□□ -1.87
VCAM1-202ENST00000347652 KLK12Q9UKR0 248 aa3.37□□□□□ -1.87
VCAM1-202ENST00000347652 NBDYA0A0U1RRE5 68 aa3.37□□□□□ -1.87
VCAM1-202ENST00000347652 CIRBP-AS1Q8TBR5 109 aa3.37□□□□□ -1.87
VCAM1-202ENST00000347652 HIST1H2BLQ99880 126 aa3.37□□□□□ -1.87
VCAM1-202ENST00000347652 DNAH17Q9UFH2 4485 aa3.37□□□□□ -1.87
VCAM1-202ENST00000347652 PKD1P98161 4303 aa3.36□□□□□ -1.87
VCAM1-202ENST00000347652 TLX1NBP0CAT3 122 aa3.36□□□□□ -1.87
VCAM1-202ENST00000347652 TRAV12-1A0A0B4J245 112 aa3.36□□□□□ -1.87
VCAM1-202ENST00000347652 LINC00959A0A1B0GUT2 108 aa3.36□□□□□ -1.87
VCAM1-202ENST00000347652 CLPSL2Q6UWE3 100 aa3.36□□□□□ -1.87
VCAM1-202ENST00000347652 Q6ZR54 194 aa3.36□□□□□ -1.87
VCAM1-202ENST00000347652 UQCRQO14949 82 aa3.35□□□□□ -1.87
VCAM1-202ENST00000347652 CRPP02741 224 aa3.35□□□□□ -1.87
VCAM1-202ENST00000347652 UBE2D1P51668 147 aa3.35□□□□□ -1.87
VCAM1-202ENST00000347652 MIAQ16674 131 aa3.35□□□□□ -1.87
VCAM1-202ENST00000347652 UBE2WQ96B02 151 aa3.35□□□□□ -1.87
VCAM1-202ENST00000347652 DNAH11Q96DT5 4516 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms