RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 FAM208BQ5VWN6 2430 aa10.46□□□□□ -0.73
LMNA-201ENST00000347559 APCP25054 2843 aa10.46□□□□□ -0.74
LMNA-201ENST00000347559 COX17Q14061 63 aa10.45□□□□□ -0.74
LMNA-201ENST00000347559 CHCHD10Q8WYQ3 142 aaPredicted RBP10.45□□□□□ -0.74
LMNA-201ENST00000347559 CR1P17927 2039 aa10.45□□□□□ -0.74
LMNA-201ENST00000347559 C10orf25Q5T742 122 aa10.45□□□□□ -0.74
LMNA-201ENST00000347559 UNQ6190/PRO20217Q6UXQ8 127 aa10.45□□□□□ -0.74
LMNA-201ENST00000347559 LINC01006Q8NI28 216 aa10.45□□□□□ -0.74
LMNA-201ENST00000347559 ANGP03950 147 aaKnown RBP10.44□□□□□ -0.74
LMNA-201ENST00000347559 CFAP46Q8IYW2 2715 aa10.44□□□□□ -0.74
LMNA-201ENST00000347559 GCN1Q92616 2671 aaKnown RBP10.44□□□□□ -0.74
LMNA-201ENST00000347559 PDE6GP18545 87 aa10.44□□□□□ -0.74
LMNA-201ENST00000347559 F8WDY8 70 aa10.43□□□□□ -0.74
LMNA-201ENST00000347559 V9GYY9 64 aa10.43□□□□□ -0.74
LMNA-201ENST00000347559 ATP5EP56381 51 aaPredicted RBP10.43□□□□□ -0.74
LMNA-201ENST00000347559 CD164L2Q6UWJ8 174 aa10.42□□□□□ -0.74
LMNA-201ENST00000347559 MYO18BQ8IUG5 2567 aa10.42□□□□□ -0.74
LMNA-201ENST00000347559 C9orf66Q5T8R8 295 aa10.42□□□□□ -0.74
LMNA-201ENST00000347559 AKAP9Q99996 3911 aa10.42□□□□□ -0.74
LMNA-201ENST00000347559 CCL24O00175 119 aa10.41□□□□□ -0.74
LMNA-201ENST00000347559 XAGE1AQ9HD64 81 aa10.41□□□□□ -0.74
LMNA-201ENST00000347559 ESM1Q9NQ30 184 aa10.41□□□□□ -0.74
LMNA-201ENST00000347559 NBPF19A0A087WUL8 3843 aa10.41□□□□□ -0.74
LMNA-201ENST00000347559 FUSP35637 526 aaKnown RBP eCLIP10.41□□□□□ -0.74
LMNA-201ENST00000347559 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.41□□□□□ -0.74
LMNA-201ENST00000347559 A0A1B0GUV1 79 aa10.4□□□□□ -0.74
LMNA-201ENST00000347559 LRCOL1A6NCL2 159 aa10.4□□□□□ -0.74
LMNA-201ENST00000347559 ABCA12Q86UK0 2595 aa10.4□□□□□ -0.74
LMNA-201ENST00000347559 PRYO14603 147 aa10.4□□□□□ -0.75
LMNA-201ENST00000347559 BBC3Q96PG8 261 aaPredicted RBP10.39□□□□□ -0.75
LMNA-201ENST00000347559 CCDC168Q8NDH2 2452 aa10.39□□□□□ -0.75
LMNA-201ENST00000347559 SEC61GP60059 68 aa10.39□□□□□ -0.75
LMNA-201ENST00000347559 REG3AQ06141 175 aa10.39□□□□□ -0.75
LMNA-201ENST00000347559 DIRC1Q969H9 104 aa10.39□□□□□ -0.75
LMNA-201ENST00000347559 HIGD2AQ9BW72 106 aa10.39□□□□□ -0.75
LMNA-201ENST00000347559 DOPEY1Q5JWR5 2465 aa10.39□□□□□ -0.75
LMNA-201ENST00000347559 SPAG11BQ08648 103 aa10.38□□□□□ -0.75
LMNA-201ENST00000347559 CACNA1AO00555 2505 aa10.38□□□□□ -0.75
LMNA-201ENST00000347559 ESRGQ1W209 222 aa10.38□□□□□ -0.75
LMNA-201ENST00000347559 IGHV4-28A0A0C4DH34 117 aa10.37□□□□□ -0.75
LMNA-201ENST00000347559 IGLV6-57P01721 117 aa10.37□□□□□ -0.75
LMNA-201ENST00000347559 CSNK1G2-AS1Q8NCQ2 148 aa10.37□□□□□ -0.75
LMNA-201ENST00000347559 CYSRT1A8MQ03 144 aa10.36□□□□□ -0.75
LMNA-201ENST00000347559 DSCR9P59020 149 aa10.35□□□□□ -0.75
LMNA-201ENST00000347559 C3orf84H3BNL1 204 aa10.35□□□□□ -0.75
LMNA-201ENST00000347559 COX7BP24311 80 aa10.35□□□□□ -0.75
LMNA-201ENST00000347559 ZNF73O43830 326 aaPredicted RBP10.34□□□□□ -0.75
LMNA-201ENST00000347559 CELA1Q9UNI1 258 aa10.34□□□□□ -0.75
LMNA-201ENST00000347559 IGKV4-1P06312 121 aa10.33□□□□□ -0.76
LMNA-201ENST00000347559 PRO0255Q9UI72 69 aa10.32□□□□□ -0.76
LMNA-201ENST00000347559 OCR1Q9BZK8 76 aa10.32□□□□□ -0.76
LMNA-201ENST00000347559 PKD1L2Q7Z442 2459 aa10.32□□□□□ -0.76
LMNA-201ENST00000347559 IGHV4-31P0DP07 118 aa10.31□□□□□ -0.76
LMNA-201ENST00000347559 FAM30AQ9NZY2 134 aa10.31□□□□□ -0.76
LMNA-201ENST00000347559 DEFB4AO15263 64 aa10.31□□□□□ -0.76
LMNA-201ENST00000347559 FSHBP01225 129 aa10.31□□□□□ -0.76
LMNA-201ENST00000347559 Q6ZTC4 211 aa10.31□□□□□ -0.76
LMNA-201ENST00000347559 KLK12Q9UKR0 248 aa10.31□□□□□ -0.76
LMNA-201ENST00000347559 H3BQ85 93 aa10.3□□□□□ -0.76
LMNA-201ENST00000347559 ERC2-IT1O76042 136 aa10.3□□□□□ -0.76
LMNA-201ENST00000347559 C19orf73Q9NVV2 129 aa10.29□□□□□ -0.76
LMNA-201ENST00000347559 PRB2P02812 416 aaPredicted RBP10.28□□□□□ -0.76
LMNA-201ENST00000347559 CMC4P56277 68 aaPredicted RBP10.27□□□□□ -0.76
LMNA-201ENST00000347559 DEFB105AQ8NG35 78 aa10.27□□□□□ -0.76
LMNA-201ENST00000347559 MTORP42345 2549 aa10.27□□□□□ -0.77
LMNA-201ENST00000347559 HIGD2BQ4VC39 106 aa10.27□□□□□ -0.77
LMNA-201ENST00000347559 ELOF1P60002 83 aaKnown RBP10.26□□□□□ -0.77
LMNA-201ENST00000347559 SMIM29Q86T20 159 aa10.25□□□□□ -0.77
LMNA-201ENST00000347559 PIEZO1Q92508 2521 aa10.25□□□□□ -0.77
LMNA-201ENST00000347559 A0A0J9YWU9 116 aa10.25□□□□□ -0.77
LMNA-201ENST00000347559 IGHV4-30-4P0DP06 118 aa10.25□□□□□ -0.77
LMNA-201ENST00000347559 PRR4Q16378 134 aa10.25□□□□□ -0.77
LMNA-201ENST00000347559 C6orf48Q9UBA6 75 aa10.25□□□□□ -0.77
LMNA-201ENST00000347559 PSPHP1O15172 72 aa10.24□□□□□ -0.77
LMNA-201ENST00000347559 HTN3P15516 51 aa10.23□□□□□ -0.77
LMNA-201ENST00000347559 LINC00612Q8N6U2 182 aa10.23□□□□□ -0.77
LMNA-201ENST00000347559 IGLV1-51P01701 117 aa10.22□□□□□ -0.77
LMNA-201ENST00000347559 DNAJC9-AS1A6NH13 148 aa10.2□□□□□ -0.78
LMNA-201ENST00000347559 hDV103S1A0JD37 113 aa10.2□□□□□ -0.78
LMNA-201ENST00000347559 C1orf64Q8NEQ6 169 aa10.2□□□□□ -0.78
LMNA-201ENST00000347559 Q6ZRP5 223 aa10.19□□□□□ -0.78
LMNA-201ENST00000347559 PMAIP1Q13794 54 aa10.18□□□□□ -0.78
LMNA-201ENST00000347559 X6R8D5 127 aa10.18□□□□□ -0.78
LMNA-201ENST00000347559 LINC00528Q8N1L1 170 aa10.18□□□□□ -0.78
LMNA-201ENST00000347559 HIVEP2P31629 2446 aa10.17□□□□□ -0.78
LMNA-201ENST00000347559 CAMK2N2Q96S95 79 aa10.17□□□□□ -0.78
LMNA-201ENST00000347559 VPREB1P12018 145 aa10.17□□□□□ -0.78
LMNA-201ENST00000347559 ACANP16112 2415 aa10.16□□□□□ -0.78
LMNA-201ENST00000347559 KRTAP10-9P60411 292 aa10.15□□□□□ -0.78
LMNA-201ENST00000347559 M0R378 163 aa10.15□□□□□ -0.79
LMNA-201ENST00000347559 DEFB135Q30KP9 77 aa10.14□□□□□ -0.79
LMNA-201ENST00000347559 PRR15Q8IV56 129 aa10.14□□□□□ -0.79
LMNA-201ENST00000347559 GVQW2A0A096LPI5 108 aaPredicted RBP10.12□□□□□ -0.79
LMNA-201ENST00000347559 KPRPQ5T749 579 aaPredicted RBP10.12□□□□□ -0.79
LMNA-201ENST00000347559 ITPR3Q14573 2671 aa10.12□□□□□ -0.79
LMNA-201ENST00000347559 TRAV22A0A0B4J277 110 aa10.11□□□□□ -0.79
LMNA-201ENST00000347559 FLNAP21333 2647 aaKnown RBP10.11□□□□□ -0.79
LMNA-201ENST00000347559 IGSF10Q6WRI0 2623 aa10.1□□□□□ -0.79
LMNA-201ENST00000347559 Q1T7F1 81 aa10.1□□□□□ -0.79
LMNA-201ENST00000347559 Q6ZRU5 148 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms