RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 UPK3BQ9BT76 320 aa11.02□□□□□ -0.64
SCARB1-202ENST00000339570 TMEM256-PLSCR3K7ERE1 68 aa11.02□□□□□ -0.65
SCARB1-202ENST00000339570 CELA1Q9UNI1 258 aa11.02□□□□□ -0.65
SCARB1-202ENST00000339570 OTOGQ6ZRI0 2925 aa11.02□□□□□ -0.65
SCARB1-202ENST00000339570 X6R8D5 127 aa11.02□□□□□ -0.65
SCARB1-202ENST00000339570 CRYGAP11844 174 aa11.01□□□□□ -0.65
SCARB1-202ENST00000339570 KIAA0087Q14695 138 aa11.01□□□□□ -0.65
SCARB1-202ENST00000339570 HIGD2BQ4VC39 106 aa11.01□□□□□ -0.65
SCARB1-202ENST00000339570 CMC4P56277 68 aaPredicted RBP11.01□□□□□ -0.65
SCARB1-202ENST00000339570 CD164L2Q6UWJ8 174 aa11.01□□□□□ -0.65
SCARB1-202ENST00000339570 CYSRT1A8MQ03 144 aa11□□□□□ -0.65
SCARB1-202ENST00000339570 OBSCN-AS1Q96MR7 158 aa11□□□□□ -0.65
SCARB1-202ENST00000339570 KRTAP10-3P60369 221 aa11□□□□□ -0.65
SCARB1-202ENST00000339570 LY6G6DO95868 133 aa10.99□□□□□ -0.65
SCARB1-202ENST00000339570 RBM3P98179 157 aaKnown RBP10.99□□□□□ -0.65
SCARB1-202ENST00000339570 JMJD7-PLA2G4BH0Y9G9 81 aa10.99□□□□□ -0.65
SCARB1-202ENST00000339570 SNURFQ9Y675 71 aa10.99□□□□□ -0.65
SCARB1-202ENST00000339570 BAHCC1Q9P281 2608 aa10.98□□□□□ -0.65
SCARB1-202ENST00000339570 IGHV4-28A0A0C4DH34 117 aa10.98□□□□□ -0.65
SCARB1-202ENST00000339570 ANK3Q12955 4377 aaKnown RBP10.97□□□□□ -0.65
SCARB1-202ENST00000339570 A0A1B0GUV1 79 aa10.97□□□□□ -0.65
SCARB1-202ENST00000339570 TRBV10-3A0A0K0K1G6 114 aa10.96□□□□□ -0.66
SCARB1-202ENST00000339570 OXTP01178 125 aa10.96□□□□□ -0.66
SCARB1-202ENST00000339570 LINC00575Q6W349 94 aa10.95□□□□□ -0.66
SCARB1-202ENST00000339570 DPH3Q96FX2 82 aa10.95□□□□□ -0.66
SCARB1-202ENST00000339570 C4orf26Q17RF5 130 aa10.94□□□□□ -0.66
SCARB1-202ENST00000339570 NOTCH1P46531 2555 aa10.93□□□□□ -0.66
SCARB1-202ENST00000339570 TRAV10A0A0B4J240 114 aa10.93□□□□□ -0.66
SCARB1-202ENST00000339570 Q8N9L7 120 aa10.92□□□□□ -0.66
SCARB1-202ENST00000339570 KRTAP1-1Q07627 177 aa10.92□□□□□ -0.66
SCARB1-202ENST00000339570 SMIM9A6NGZ8 99 aa10.91□□□□□ -0.66
SCARB1-202ENST00000339570 HRCT1Q6UXD1 115 aa10.91□□□□□ -0.66
SCARB1-202ENST00000339570 DEFB105AQ8NG35 78 aa10.91□□□□□ -0.66
SCARB1-202ENST00000339570 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.89□□□□□ -0.67
SCARB1-202ENST00000339570 Q6ZQT0 140 aa10.89□□□□□ -0.67
SCARB1-202ENST00000339570 LINC01547P58512 204 aaPredicted RBP10.89□□□□□ -0.67
SCARB1-202ENST00000339570 TMEM258P61165 79 aa10.89□□□□□ -0.67
SCARB1-202ENST00000339570 Q6ZVQ6 151 aa10.89□□□□□ -0.67
SCARB1-202ENST00000339570 MAST4O15021 2626 aa10.88□□□□□ -0.67
SCARB1-202ENST00000339570 FLNBO75369 2602 aaKnown RBP10.88□□□□□ -0.67
SCARB1-202ENST00000339570 NDUFC2O95298 119 aa10.87□□□□□ -0.67
SCARB1-202ENST00000339570 RMI2Q96E14 147 aa10.87□□□□□ -0.67
SCARB1-202ENST00000339570 ZNF561-AS1K7EIQ3 104 aa10.87□□□□□ -0.67
SCARB1-202ENST00000339570 TENM3Q9P273 2699 aa10.87□□□□□ -0.67
SCARB1-202ENST00000339570 COX17Q14061 63 aa10.87□□□□□ -0.67
SCARB1-202ENST00000339570 C6orf48Q9UBA6 75 aa10.87□□□□□ -0.67
SCARB1-202ENST00000339570 RETNQ9HD89 108 aa10.86□□□□□ -0.67
SCARB1-202ENST00000339570 FBN1P35555 2871 aaKnown RBP10.86□□□□□ -0.67
SCARB1-202ENST00000339570 LINC00167Q96N53 147 aa10.86□□□□□ -0.67
SCARB1-202ENST00000339570 CAMK2N2Q96S95 79 aa10.86□□□□□ -0.67
SCARB1-202ENST00000339570 NSD1Q96L73 2696 aaPredicted RBP10.85□□□□□ -0.67
SCARB1-202ENST00000339570 DIRC1Q969H9 104 aa10.85□□□□□ -0.67
SCARB1-202ENST00000339570 C16orf95Q9H693 158 aa10.85□□□□□ -0.67
SCARB1-202ENST00000339570 STAB1Q9NY15 2570 aa10.85□□□□□ -0.67
SCARB1-202ENST00000339570 WFDC10BQ8IUB3 73 aa10.84□□□□□ -0.67
SCARB1-202ENST00000339570 LINC00612Q8N6U2 182 aa10.84□□□□□ -0.67
SCARB1-202ENST00000339570 LYRM9A8MSI8 78 aa10.83□□□□□ -0.68
SCARB1-202ENST00000339570 C3orf84H3BNL1 204 aa10.83□□□□□ -0.68
SCARB1-202ENST00000339570 ZNF73O43830 326 aaPredicted RBP10.83□□□□□ -0.68
SCARB1-202ENST00000339570 COX7BP24311 80 aa10.81□□□□□ -0.68
SCARB1-202ENST00000339570 MUC7Q8TAX7 377 aa10.81□□□□□ -0.68
SCARB1-202ENST00000339570 SPART-AS1P0CW21 52 aa10.81□□□□□ -0.68
SCARB1-202ENST00000339570 TM2D3Q9BRN9 247 aa10.81□□□□□ -0.68
SCARB1-202ENST00000339570 INAFM1C9JVW0 142 aa10.81□□□□□ -0.68
SCARB1-202ENST00000339570 NBEAL1Q6ZS30 2694 aa10.8□□□□□ -0.68
SCARB1-202ENST00000339570 COL6A5A8TX70 2615 aa10.8□□□□□ -0.68
SCARB1-202ENST00000339570 FAM236DA0A1B0GTK5 79 aa10.79□□□□□ -0.68
SCARB1-202ENST00000339570 FAM236CP0DP71 79 aa10.79□□□□□ -0.68
SCARB1-202ENST00000339570 IGLV6-57P01721 117 aa10.79□□□□□ -0.68
SCARB1-202ENST00000339570 ATP5EP2Q5VTU8 51 aa10.79□□□□□ -0.68
SCARB1-202ENST00000339570 F8WEM9 126 aa10.79□□□□□ -0.68
SCARB1-202ENST00000339570 APOC4P55056 127 aa10.79□□□□□ -0.68
SCARB1-202ENST00000339570 C5orf47Q569G3 176 aa10.78□□□□□ -0.68
SCARB1-202ENST00000339570 LELP1Q5T871 98 aa10.78□□□□□ -0.68
SCARB1-202ENST00000339570 Q6ZRU5 148 aa10.78□□□□□ -0.68
SCARB1-202ENST00000339570 Q8NAQ8 132 aa10.78□□□□□ -0.68
SCARB1-202ENST00000339570 IGKV2D-24A0A075B6R9 120 aa10.77□□□□□ -0.69
SCARB1-202ENST00000339570 C9orf66Q5T8R8 295 aa10.77□□□□□ -0.69
SCARB1-202ENST00000339570 IGHV4-30-4P0DP06 118 aa10.76□□□□□ -0.69
SCARB1-202ENST00000339570 LYPD5Q6UWN5 251 aa10.76□□□□□ -0.69
SCARB1-202ENST00000339570 BPY2O14599 106 aa10.76□□□□□ -0.69
SCARB1-202ENST00000339570 OXLD1Q5BKU9 147 aa10.75□□□□□ -0.69
SCARB1-202ENST00000339570 RPL37AP8A6NKH3 93 aa10.74□□□□□ -0.69
SCARB1-202ENST00000339570 RPS28P62857 69 aaKnown RBP10.73□□□□□ -0.69
SCARB1-202ENST00000339570 A0A0J9YWU9 116 aa10.73□□□□□ -0.69
SCARB1-202ENST00000339570 TRAV7A0A075B6U4 112 aa10.73□□□□□ -0.69
SCARB1-202ENST00000339570 H7BZZ5 65 aa10.72□□□□□ -0.69
SCARB1-202ENST00000339570 KPRPQ5T749 579 aaPredicted RBP10.72□□□□□ -0.69
SCARB1-202ENST00000339570 Q6ZTC4 211 aa10.72□□□□□ -0.69
SCARB1-202ENST00000339570 LOC110117498A0A087WWA1 95 aa10.71□□□□□ -0.69
SCARB1-202ENST00000339570 Q5XG85 94 aa10.71□□□□□ -0.7
SCARB1-202ENST00000339570 PRB2P02812 416 aaPredicted RBP10.7□□□□□ -0.7
SCARB1-202ENST00000339570 CSMD3Q7Z407 3707 aa10.69□□□□□ -0.7
SCARB1-202ENST00000339570 MIFP14174 115 aa10.69□□□□□ -0.7
SCARB1-202ENST00000339570 VPREB1P12018 145 aa10.69□□□□□ -0.7
SCARB1-202ENST00000339570 Q6ZRP5 223 aa10.69□□□□□ -0.7
SCARB1-202ENST00000339570 NREPQ16612 68 aa10.68□□□□□ -0.7
SCARB1-202ENST00000339570 PRR34Q9NV39 138 aa10.68□□□□□ -0.7
SCARB1-202ENST00000339570 LINC00474Q9P2X8 69 aa10.68□□□□□ -0.7
SCARB1-202ENST00000339570 ELOF1P60002 83 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms