RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 COX7A2LO14548 114 aa8.56□□□□□ -1.04
LIMK1-201ENST00000336180 CCL18P55774 89 aa8.56□□□□□ -1.04
LIMK1-201ENST00000336180 SND1-IT1Q9HBX3 110 aa8.56□□□□□ -1.04
LIMK1-201ENST00000336180 DEFB131BA0A096LNP1 70 aa8.55□□□□□ -1.04
LIMK1-201ENST00000336180 A0A1B0GUV1 79 aa8.55□□□□□ -1.04
LIMK1-201ENST00000336180 C11orf45Q8TAV5 145 aa8.55□□□□□ -1.04
LIMK1-201ENST00000336180 BRK1Q8WUW1 75 aa8.55□□□□□ -1.04
LIMK1-201ENST00000336180 Q9HAA7 133 aa8.55□□□□□ -1.04
LIMK1-201ENST00000336180 EGFEM1PQ0D2K5 195 aa8.55□□□□□ -1.04
LIMK1-201ENST00000336180 ESRGQ1W209 222 aa8.55□□□□□ -1.04
LIMK1-201ENST00000336180 LINC00337Q8N6G1 96 aa8.55□□□□□ -1.04
LIMK1-201ENST00000336180 LYSTQ99698 3801 aa8.55□□□□□ -1.04
LIMK1-201ENST00000336180 COX7CP15954 63 aa8.54□□□□□ -1.04
LIMK1-201ENST00000336180 UNQ6190/PRO20217Q6UXQ8 127 aa8.54□□□□□ -1.04
LIMK1-201ENST00000336180 LELP1Q5T871 98 aa8.54□□□□□ -1.04
LIMK1-201ENST00000336180 ENHOQ6UWT2 76 aa8.54□□□□□ -1.04
LIMK1-201ENST00000336180 FAM19A1Q7Z5A9 133 aa8.54□□□□□ -1.04
LIMK1-201ENST00000336180 K7EIL1 84 aa8.53□□□□□ -1.04
LIMK1-201ENST00000336180 CRYGAP11844 174 aa8.53□□□□□ -1.04
LIMK1-201ENST00000336180 IGKV2-28A0A075B6P5 120 aa8.53□□□□□ -1.04
LIMK1-201ENST00000336180 TIMM17BO60830 172 aa8.53□□□□□ -1.04
LIMK1-201ENST00000336180 IGKV2D-28P01615 120 aa8.53□□□□□ -1.04
LIMK1-201ENST00000336180 LINC01620Q4KN68 170 aa8.52□□□□□ -1.04
LIMK1-201ENST00000336180 HUWE1Q7Z6Z7 4374 aaKnown RBP8.52□□□□□ -1.05
LIMK1-201ENST00000336180 CD164L2Q6UWJ8 174 aa8.52□□□□□ -1.05
LIMK1-201ENST00000336180 TRBV7-7A0A0K0K1E9 115 aa8.52□□□□□ -1.05
LIMK1-201ENST00000336180 TMEM258P61165 79 aa8.52□□□□□ -1.05
LIMK1-201ENST00000336180 CRPP02741 224 aa8.51□□□□□ -1.05
LIMK1-201ENST00000336180 FAM218AQ96MZ4 157 aa8.51□□□□□ -1.05
LIMK1-201ENST00000336180 CSMD3Q7Z407 3707 aa8.51□□□□□ -1.05
LIMK1-201ENST00000336180 DNAH3Q8TD57 4116 aa8.51□□□□□ -1.05
LIMK1-201ENST00000336180 SPAG11BQ08648 103 aa8.5□□□□□ -1.05
LIMK1-201ENST00000336180 KIAA0087Q14695 138 aa8.5□□□□□ -1.05
LIMK1-201ENST00000336180 ATXN8Q156A1 80 aa8.5□□□□□ -1.05
LIMK1-201ENST00000336180 Q8NDZ9 215 aa8.5□□□□□ -1.05
LIMK1-201ENST00000336180 TRBV30A0A0K0K1B3 111 aa8.5□□□□□ -1.05
LIMK1-201ENST00000336180 NCR3O14931 201 aa8.5□□□□□ -1.05
LIMK1-201ENST00000336180 XAGE1AQ9HD64 81 aa8.5□□□□□ -1.05
LIMK1-201ENST00000336180 COX6CP09669 75 aa8.49□□□□□ -1.05
LIMK1-201ENST00000336180 IGKV2D-24A0A075B6R9 120 aa8.47□□□□□ -1.05
LIMK1-201ENST00000336180 LECT2O14960 151 aa8.47□□□□□ -1.05
LIMK1-201ENST00000336180 Q8IZM0 81 aa8.47□□□□□ -1.05
LIMK1-201ENST00000336180 SLPIP03973 132 aa8.47□□□□□ -1.05
LIMK1-201ENST00000336180 SMIM11BQ8TCY0 68 aa8.47□□□□□ -1.05
LIMK1-201ENST00000336180 IBA57-AS1B1ANH7 110 aa8.46□□□□□ -1.05
LIMK1-201ENST00000336180 A0A087WYN8 130 aa8.44□□□□□ -1.06
LIMK1-201ENST00000336180 CASC10Q5T4H9 136 aa8.44□□□□□ -1.06
LIMK1-201ENST00000336180 LST1O00453 97 aa8.44□□□□□ -1.06
LIMK1-201ENST00000336180 PRR34Q9NV39 138 aa8.42□□□□□ -1.06
LIMK1-201ENST00000336180 TRBV10-2A0A0K0K1G8 114 aa8.42□□□□□ -1.06
LIMK1-201ENST00000336180 PMAIP1Q13794 54 aa8.41□□□□□ -1.06
LIMK1-201ENST00000336180 DNAH10Q8IVF4 4471 aa8.41□□□□□ -1.06
LIMK1-201ENST00000336180 C6orf48Q9UBA6 75 aa8.41□□□□□ -1.06
LIMK1-201ENST00000336180 TRAV13-2A0A0B4J235 113 aa8.41□□□□□ -1.06
LIMK1-201ENST00000336180 RPL18AQ02543 176 aaKnown RBP8.41□□□□□ -1.06
LIMK1-201ENST00000336180 LINC00588Q9Y4M8 146 aa8.4□□□□□ -1.06
LIMK1-201ENST00000336180 CAMK2N2Q96S95 79 aa8.4□□□□□ -1.07
LIMK1-201ENST00000336180 IMUPQ9GZP8 106 aa8.4□□□□□ -1.07
LIMK1-201ENST00000336180 DNHD1Q96M86 4753 aa8.4□□□□□ -1.07
LIMK1-201ENST00000336180 C9orf129Q5T035 196 aaKnown RBP8.39□□□□□ -1.07
LIMK1-201ENST00000336180 COPS9Q8WXC6 57 aa8.39□□□□□ -1.07
LIMK1-201ENST00000336180 Q6ZRU5 148 aa8.39□□□□□ -1.07
LIMK1-201ENST00000336180 BAALC-AS2P0C853 105 aa8.38□□□□□ -1.07
LIMK1-201ENST00000336180 SMCR5Q8TEV8 140 aa8.38□□□□□ -1.07
LIMK1-201ENST00000336180 TM2D3Q9BRN9 247 aa8.37□□□□□ -1.07
LIMK1-201ENST00000336180 S100A7L2Q5SY68 101 aa8.37□□□□□ -1.07
LIMK1-201ENST00000336180 C15orf56Q8N910 161 aa8.37□□□□□ -1.07
LIMK1-201ENST00000336180 DNAH9Q9NYC9 4486 aa8.36□□□□□ -1.07
LIMK1-201ENST00000336180 TRAV10A0A0B4J240 114 aa8.36□□□□□ -1.07
LIMK1-201ENST00000336180 ATOX1O00244 68 aa8.36□□□□□ -1.07
LIMK1-201ENST00000336180 KRTAP26-1Q6PEX3 210 aa8.35□□□□□ -1.07
LIMK1-201ENST00000336180 FP248Q71RG6 208 aaPredicted RBP8.35□□□□□ -1.07
LIMK1-201ENST00000336180 UPK3BQ9BT76 320 aa8.35□□□□□ -1.07
LIMK1-201ENST00000336180 RPL28P46779 137 aaKnown RBP8.35□□□□□ -1.07
LIMK1-201ENST00000336180 C6orf99Q4VX62 202 aa8.35□□□□□ -1.07
LIMK1-201ENST00000336180 NDUFC2O95298 119 aa8.34□□□□□ -1.07
LIMK1-201ENST00000336180 DNAH7Q8WXX0 4024 aa8.34□□□□□ -1.07
LIMK1-201ENST00000336180 FAM240AA0A1B0GVK7 77 aa8.33□□□□□ -1.08
LIMK1-201ENST00000336180 H3BT86 120 aa8.33□□□□□ -1.08
LIMK1-201ENST00000336180 DNAL4O96015 105 aa8.33□□□□□ -1.08
LIMK1-201ENST00000336180 LINC00474Q9P2X8 69 aa8.33□□□□□ -1.08
LIMK1-201ENST00000336180 CXCL5P42830 114 aa8.33□□□□□ -1.08
LIMK1-201ENST00000336180 CD164Q04900 197 aa8.33□□□□□ -1.08
LIMK1-201ENST00000336180 C22orf24Q9Y442 160 aa8.32□□□□□ -1.08
LIMK1-201ENST00000336180 H3BNG1 76 aa8.32□□□□□ -1.08
LIMK1-201ENST00000336180 LINC01556Q5JQF7 62 aa8.31□□□□□ -1.08
LIMK1-201ENST00000336180 SERP2Q8N6R1 65 aa8.31□□□□□ -1.08
LIMK1-201ENST00000336180 LINC00643Q86TS7 51 aa8.31□□□□□ -1.08
LIMK1-201ENST00000336180 MEGF8Q7Z7M0 2845 aa8.31□□□□□ -1.08
LIMK1-201ENST00000336180 TRBV10-3A0A0K0K1G6 114 aa8.31□□□□□ -1.08
LIMK1-201ENST00000336180 TGP01266 2768 aa8.3□□□□□ -1.08
LIMK1-201ENST00000336180 PRKDCP78527 4128 aaKnown RBP8.3□□□□□ -1.08
LIMK1-201ENST00000336180 Q6ZRP5 223 aa8.3□□□□□ -1.08
LIMK1-201ENST00000336180 C14orf132Q9NPU4 83 aa8.3□□□□□ -1.08
LIMK1-201ENST00000336180 KRTAP1-5Q9BYS1 174 aa8.29□□□□□ -1.08
LIMK1-201ENST00000336180 FAM168BA1KXE4 195 aa8.28□□□□□ -1.08
LIMK1-201ENST00000336180 USP17L23D6RBM5 183 aa8.28□□□□□ -1.08
LIMK1-201ENST00000336180 H3BS24 57 aa8.28□□□□□ -1.08
LIMK1-201ENST00000336180 COX17Q14061 63 aa8.28□□□□□ -1.08
LIMK1-201ENST00000336180 PLECQ15149 4684 aaKnown RBP8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms