RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 IGLV1-51P01701 117 aa9.89□□□□□ -0.83
SNX20-202ENST00000330943 RBM3P98179 157 aaKnown RBP9.89□□□□□ -0.83
SNX20-202ENST00000330943 COX17Q14061 63 aa9.89□□□□□ -0.83
SNX20-202ENST00000330943 LINC00575Q6W349 94 aa9.89□□□□□ -0.83
SNX20-202ENST00000330943 LAMTOR3Q9UHA4 124 aa9.89□□□□□ -0.83
SNX20-202ENST00000330943 F8P00451 2351 aa9.89□□□□□ -0.83
SNX20-202ENST00000330943 Q6ZQT0 140 aa9.89□□□□□ -0.83
SNX20-202ENST00000330943 Q5XG85 94 aa9.89□□□□□ -0.83
SNX20-202ENST00000330943 STAB1Q9NY15 2570 aa9.89□□□□□ -0.83
SNX20-202ENST00000330943 NDUFC2-KCTD14E9PQ53 114 aa9.88□□□□□ -0.83
SNX20-202ENST00000330943 M0R2N4 97 aa9.88□□□□□ -0.83
SNX20-202ENST00000330943 CHCHD10Q8WYQ3 142 aaPredicted RBP9.88□□□□□ -0.83
SNX20-202ENST00000330943 CD164L2Q6UWJ8 174 aa9.88□□□□□ -0.83
SNX20-202ENST00000330943 HRCT1Q6UXD1 115 aa9.88□□□□□ -0.83
SNX20-202ENST00000330943 Q8N3U1 123 aa9.88□□□□□ -0.83
SNX20-202ENST00000330943 ZNF561-AS1K7EIQ3 104 aa9.87□□□□□ -0.83
SNX20-202ENST00000330943 HAMPP81172 84 aa9.87□□□□□ -0.83
SNX20-202ENST00000330943 ANGP03950 147 aaKnown RBP9.86□□□□□ -0.83
SNX20-202ENST00000330943 MAST4O15021 2626 aa9.86□□□□□ -0.83
SNX20-202ENST00000330943 FAM236DA0A1B0GTK5 79 aa9.86□□□□□ -0.83
SNX20-202ENST00000330943 FAM236CP0DP71 79 aa9.86□□□□□ -0.83
SNX20-202ENST00000330943 FBN1P35555 2871 aaKnown RBP9.86□□□□□ -0.83
SNX20-202ENST00000330943 LINC01547P58512 204 aaPredicted RBP9.85□□□□□ -0.83
SNX20-202ENST00000330943 PRO0255Q9UI72 69 aa9.85□□□□□ -0.83
SNX20-202ENST00000330943 IGHV4-28A0A0C4DH34 117 aa9.85□□□□□ -0.83
SNX20-202ENST00000330943 NOTCH1P46531 2555 aa9.84□□□□□ -0.83
SNX20-202ENST00000330943 PKD1L1Q8TDX9 2849 aa9.84□□□□□ -0.83
SNX20-202ENST00000330943 LOC110117498A0A087WWA1 95 aa9.84□□□□□ -0.83
SNX20-202ENST00000330943 SPATA3Q8NHX4 192 aa9.84□□□□□ -0.83
SNX20-202ENST00000330943 TRAV7A0A075B6U4 112 aa9.83□□□□□ -0.84
SNX20-202ENST00000330943 REG3AQ06141 175 aa9.83□□□□□ -0.84
SNX20-202ENST00000330943 Q6ZVQ6 151 aa9.83□□□□□ -0.84
SNX20-202ENST00000330943 C6orf223Q8N319 242 aa9.83□□□□□ -0.84
SNX20-202ENST00000330943 C10orf25Q5T742 122 aa9.83□□□□□ -0.84
SNX20-202ENST00000330943 LINC00612Q8N6U2 182 aa9.83□□□□□ -0.84
SNX20-202ENST00000330943 LINC01006Q8NI28 216 aa9.83□□□□□ -0.84
SNX20-202ENST00000330943 Q6ZQY7 126 aa9.83□□□□□ -0.84
SNX20-202ENST00000330943 UNQ6190/PRO20217Q6UXQ8 127 aa9.82□□□□□ -0.84
SNX20-202ENST00000330943 TRAV10A0A0B4J240 114 aa9.82□□□□□ -0.84
SNX20-202ENST00000330943 H7BZZ5 65 aa9.82□□□□□ -0.84
SNX20-202ENST00000330943 LINC00482Q8N8I6 264 aa9.81□□□□□ -0.84
SNX20-202ENST00000330943 WIPF1O43516 503 aa9.8□□□□□ -0.84
SNX20-202ENST00000330943 KRTAP1-1Q07627 177 aa9.8□□□□□ -0.84
SNX20-202ENST00000330943 SNURFQ9Y675 71 aa9.8□□□□□ -0.84
SNX20-202ENST00000330943 SPAG11BQ08648 103 aa9.8□□□□□ -0.84
SNX20-202ENST00000330943 J3QKU1 62 aa9.79□□□□□ -0.84
SNX20-202ENST00000330943 X6R8D5 127 aa9.79□□□□□ -0.84
SNX20-202ENST00000330943 NBEAL1Q6ZS30 2694 aa9.78□□□□□ -0.84
SNX20-202ENST00000330943 BCE1O60756 84 aa9.78□□□□□ -0.84
SNX20-202ENST00000330943 IGLV6-57P01721 117 aa9.78□□□□□ -0.84
SNX20-202ENST00000330943 SCXQ7RTU7 201 aa9.78□□□□□ -0.84
SNX20-202ENST00000330943 RMI2Q96E14 147 aa9.78□□□□□ -0.84
SNX20-202ENST00000330943 DEFB4AO15263 64 aa9.77□□□□□ -0.84
SNX20-202ENST00000330943 CYSRT1A8MQ03 144 aa9.77□□□□□ -0.85
SNX20-202ENST00000330943 SERP1Q9Y6X1 66 aa9.77□□□□□ -0.85
SNX20-202ENST00000330943 KLKP1Q107X0 134 aa9.76□□□□□ -0.85
SNX20-202ENST00000330943 MUC7Q8TAX7 377 aa9.76□□□□□ -0.85
SNX20-202ENST00000330943 PDE6GP18545 87 aa9.75□□□□□ -0.85
SNX20-202ENST00000330943 CXCL6P80162 114 aa9.75□□□□□ -0.85
SNX20-202ENST00000330943 C9orf66Q5T8R8 295 aa9.75□□□□□ -0.85
SNX20-202ENST00000330943 F8WEM9 126 aa9.74□□□□□ -0.85
SNX20-202ENST00000330943 DIRC1Q969H9 104 aa9.74□□□□□ -0.85
SNX20-202ENST00000330943 XAGE1AQ9HD64 81 aa9.74□□□□□ -0.85
SNX20-202ENST00000330943 COL6A5A8TX70 2615 aa9.73□□□□□ -0.85
SNX20-202ENST00000330943 A0A0J9YWU9 116 aa9.73□□□□□ -0.85
SNX20-202ENST00000330943 EPM2AB3EWF7 344 aa9.73□□□□□ -0.85
SNX20-202ENST00000330943 IGHV4-30-4P0DP06 118 aa9.73□□□□□ -0.85
SNX20-202ENST00000330943 TM2D3Q9BRN9 247 aa9.72□□□□□ -0.85
SNX20-202ENST00000330943 C16orf95Q9H693 158 aa9.72□□□□□ -0.85
SNX20-202ENST00000330943 LYRM9A8MSI8 78 aa9.71□□□□□ -0.86
SNX20-202ENST00000330943 TRBV7-4A0A0J9YYF1 115 aa9.7□□□□□ -0.86
SNX20-202ENST00000330943 INAFM1C9JVW0 142 aa9.7□□□□□ -0.86
SNX20-202ENST00000330943 KLK12Q9UKR0 248 aa9.7□□□□□ -0.86
SNX20-202ENST00000330943 H3BQ85 93 aa9.7□□□□□ -0.86
SNX20-202ENST00000330943 DEFB135Q30KP9 77 aa9.7□□□□□ -0.86
SNX20-202ENST00000330943 ZNF73O43830 326 aaPredicted RBP9.69□□□□□ -0.86
SNX20-202ENST00000330943 COX7BP24311 80 aa9.69□□□□□ -0.86
SNX20-202ENST00000330943 KRTAP10-3P60369 221 aa9.69□□□□□ -0.86
SNX20-202ENST00000330943 DAD1P61803 113 aa9.69□□□□□ -0.86
SNX20-202ENST00000330943 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.69□□□□□ -0.86
SNX20-202ENST00000330943 C6orf48Q9UBA6 75 aa9.69□□□□□ -0.86
SNX20-202ENST00000330943 HTN3P15516 51 aa9.68□□□□□ -0.86
SNX20-202ENST00000330943 ELOF1P60002 83 aaKnown RBP9.66□□□□□ -0.86
SNX20-202ENST00000330943 NREPQ16612 68 aa9.66□□□□□ -0.86
SNX20-202ENST00000330943 CELA1Q9UNI1 258 aa9.66□□□□□ -0.86
SNX20-202ENST00000330943 Q8N9L7 120 aa9.65□□□□□ -0.86
SNX20-202ENST00000330943 GVQW2A0A096LPI5 108 aaPredicted RBP9.65□□□□□ -0.87
SNX20-202ENST00000330943 MIFP14174 115 aa9.65□□□□□ -0.87
SNX20-202ENST00000330943 LINC00336Q6ZUF6 198 aa9.65□□□□□ -0.87
SNX20-202ENST00000330943 FP248Q71RG6 208 aaPredicted RBP9.65□□□□□ -0.87
SNX20-202ENST00000330943 LELP1Q5T871 98 aa9.64□□□□□ -0.87
SNX20-202ENST00000330943 TENM3Q9P273 2699 aa9.64□□□□□ -0.87
SNX20-202ENST00000330943 SMIM26A0A096LP01 95 aa9.64□□□□□ -0.87
SNX20-202ENST00000330943 BPY2O14599 106 aa9.64□□□□□ -0.87
SNX20-202ENST00000330943 PRR34Q9NV39 138 aa9.64□□□□□ -0.87
SNX20-202ENST00000330943 NDUFC1O43677 76 aa9.63□□□□□ -0.87
SNX20-202ENST00000330943 MRAPQ8TCY5 172 aa9.63□□□□□ -0.87
SNX20-202ENST00000330943 HIGD2BQ4VC39 106 aa9.62□□□□□ -0.87
SNX20-202ENST00000330943 TRBV7-6A0A0J9YX20 115 aa9.62□□□□□ -0.87
SNX20-202ENST00000330943 TMEM254Q8TBM7 123 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms