RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 LINC01600Q96MT4 127 aa5.2□□□□□ -1.58
TRIM55-202ENST00000315962 HIST1H4AP62805 103 aaKnown RBP5.2□□□□□ -1.58
TRIM55-202ENST00000315962 RPS28P62857 69 aaKnown RBP5.2□□□□□ -1.58
TRIM55-202ENST00000315962 EGFEM1PQ0D2K5 195 aa5.2□□□□□ -1.58
TRIM55-202ENST00000315962 IGHV3OR16-9A0A0B4J2B5 98 aa5.19□□□□□ -1.58
TRIM55-202ENST00000315962 TRACP01848 142 aa5.19□□□□□ -1.58
TRIM55-202ENST00000315962 C9orf116Q5BN46 136 aaPredicted RBP5.19□□□□□ -1.58
TRIM55-202ENST00000315962 KPRPQ5T749 579 aaPredicted RBP5.19□□□□□ -1.58
TRIM55-202ENST00000315962 WFDC10BQ8IUB3 73 aa5.19□□□□□ -1.58
TRIM55-202ENST00000315962 SEC61GP60059 68 aa5.19□□□□□ -1.58
TRIM55-202ENST00000315962 CXCL5P42830 114 aa5.18□□□□□ -1.58
TRIM55-202ENST00000315962 REG3AQ06141 175 aa5.18□□□□□ -1.58
TRIM55-202ENST00000315962 C6orf226Q5I0X4 101 aa5.18□□□□□ -1.58
TRIM55-202ENST00000315962 C3orf22Q8N5N4 141 aa5.18□□□□□ -1.58
TRIM55-202ENST00000315962 C11orf45Q8TAV5 145 aa5.18□□□□□ -1.58
TRIM55-202ENST00000315962 K7EIL1 84 aa5.18□□□□□ -1.58
TRIM55-202ENST00000315962 DEFB131BA0A096LNP1 70 aa5.17□□□□□ -1.58
TRIM55-202ENST00000315962 TRAV13-2A0A0B4J235 113 aa5.17□□□□□ -1.58
TRIM55-202ENST00000315962 LYPD5Q6UWN5 251 aa5.17□□□□□ -1.58
TRIM55-202ENST00000315962 RPL28P46779 137 aaKnown RBP5.17□□□□□ -1.58
TRIM55-202ENST00000315962 C6orf223Q8N319 242 aa5.17□□□□□ -1.58
TRIM55-202ENST00000315962 CHCHD10Q8WYQ3 142 aaPredicted RBP5.17□□□□□ -1.58
TRIM55-202ENST00000315962 TGP01266 2768 aa5.17□□□□□ -1.58
TRIM55-202ENST00000315962 MEGF8Q7Z7M0 2845 aa5.17□□□□□ -1.58
TRIM55-202ENST00000315962 SS18Q15532 418 aa5.17□□□□□ -1.58
TRIM55-202ENST00000315962 ACYP1P07311 99 aa5.16□□□□□ -1.58
TRIM55-202ENST00000315962 ESRGQ1W209 222 aa5.16□□□□□ -1.58
TRIM55-202ENST00000315962 DSCR8Q96T75 97 aa5.16□□□□□ -1.58
TRIM55-202ENST00000315962 INAFM2P0DMQ5 153 aa5.16□□□□□ -1.58
TRIM55-202ENST00000315962 TRAV23DV6A0A075B6W5 121 aa5.15□□□□□ -1.58
TRIM55-202ENST00000315962 A0A087WZ39 114 aa5.15□□□□□ -1.59
TRIM55-202ENST00000315962 UQCRQO14949 82 aa5.15□□□□□ -1.59
TRIM55-202ENST00000315962 C2orf48Q96LS8 159 aa5.15□□□□□ -1.59
TRIM55-202ENST00000315962 A0A1B0GUV1 79 aa5.14□□□□□ -1.59
TRIM55-202ENST00000315962 COX7CP15954 63 aa5.14□□□□□ -1.59
TRIM55-202ENST00000315962 FAM19A1Q7Z5A9 133 aa5.14□□□□□ -1.59
TRIM55-202ENST00000315962 LINC01561Q8N1V8 128 aa5.14□□□□□ -1.59
TRIM55-202ENST00000315962 Q8NDZ9 215 aa5.14□□□□□ -1.59
TRIM55-202ENST00000315962 COPS9Q8WXC6 57 aa5.14□□□□□ -1.59
TRIM55-202ENST00000315962 ENHOQ6UWT2 76 aa5.14□□□□□ -1.59
TRIM55-202ENST00000315962 HIGD2BQ4VC39 106 aa5.13□□□□□ -1.59
TRIM55-202ENST00000315962 C10orf25Q5T742 122 aa5.13□□□□□ -1.59
TRIM55-202ENST00000315962 DNHD1Q96M86 4753 aa5.13□□□□□ -1.59
TRIM55-202ENST00000315962 M0R2N4 97 aa5.13□□□□□ -1.59
TRIM55-202ENST00000315962 LELP1Q5T871 98 aa5.13□□□□□ -1.59
TRIM55-202ENST00000315962 IMUPQ9GZP8 106 aa5.13□□□□□ -1.59
TRIM55-202ENST00000315962 USP17L23D6RBM5 183 aa5.12□□□□□ -1.59
TRIM55-202ENST00000315962 Q5XG85 94 aa5.12□□□□□ -1.59
TRIM55-202ENST00000315962 UNQ6190/PRO20217Q6UXQ8 127 aa5.12□□□□□ -1.59
TRIM55-202ENST00000315962 PRO0628Q9UI54 55 aa5.12□□□□□ -1.59
TRIM55-202ENST00000315962 RPL18AQ02543 176 aaKnown RBP5.12□□□□□ -1.59
TRIM55-202ENST00000315962 FAM19A3Q7Z5A8 133 aa5.12□□□□□ -1.59
TRIM55-202ENST00000315962 ORMDL1Q9P0S3 153 aa5.12□□□□□ -1.59
TRIM55-202ENST00000315962 C6orf99Q4VX62 202 aa5.11□□□□□ -1.59
TRIM55-202ENST00000315962 CD164L2Q6UWJ8 174 aa5.11□□□□□ -1.59
TRIM55-202ENST00000315962 IBA57-AS1B1ANH7 110 aa5.11□□□□□ -1.59
TRIM55-202ENST00000315962 OXTP01178 125 aa5.11□□□□□ -1.59
TRIM55-202ENST00000315962 C4orf26Q17RF5 130 aa5.11□□□□□ -1.59
TRIM55-202ENST00000315962 ATOX1O00244 68 aa5.1□□□□□ -1.59
TRIM55-202ENST00000315962 HRCT1Q6UXD1 115 aa5.1□□□□□ -1.59
TRIM55-202ENST00000315962 SCXQ7RTU7 201 aa5.1□□□□□ -1.59
TRIM55-202ENST00000315962 IGKV2D-24A0A075B6R9 120 aa5.1□□□□□ -1.59
TRIM55-202ENST00000315962 H0YGX0 51 aa5.1□□□□□ -1.59
TRIM55-202ENST00000315962 XAGE1AQ9HD64 81 aa5.1□□□□□ -1.59
TRIM55-202ENST00000315962 HUWE1Q7Z6Z7 4374 aaKnown RBP5.09□□□□□ -1.59
TRIM55-202ENST00000315962 GHRHP01286 108 aa5.09□□□□□ -1.59
TRIM55-202ENST00000315962 SPAG11BQ08648 103 aa5.09□□□□□ -1.6
TRIM55-202ENST00000315962 KIAA0087Q14695 138 aa5.09□□□□□ -1.6
TRIM55-202ENST00000315962 Q6JHZ5 121 aa5.08□□□□□ -1.6
TRIM55-202ENST00000315962 C20orf197Q8N268 126 aa5.08□□□□□ -1.6
TRIM55-202ENST00000315962 Q8N814 137 aa5.08□□□□□ -1.6
TRIM55-202ENST00000315962 TM2D3Q9BRN9 247 aa5.08□□□□□ -1.6
TRIM55-202ENST00000315962 S100A7L2Q5SY68 101 aa5.08□□□□□ -1.6
TRIM55-202ENST00000315962 CASC10Q5T4H9 136 aa5.08□□□□□ -1.6
TRIM55-202ENST00000315962 LAMTOR3Q9UHA4 124 aa5.08□□□□□ -1.6
TRIM55-202ENST00000315962 V9GYY9 64 aa5.08□□□□□ -1.6
TRIM55-202ENST00000315962 DNAH3Q8TD57 4116 aa5.07□□□□□ -1.6
TRIM55-202ENST00000315962 HAMPP81172 84 aa5.07□□□□□ -1.6
TRIM55-202ENST00000315962 SERP2Q8N6R1 65 aa5.07□□□□□ -1.6
TRIM55-202ENST00000315962 LINC00588Q9Y4M8 146 aa5.07□□□□□ -1.6
TRIM55-202ENST00000315962 CCKP06307 115 aa5.07□□□□□ -1.6
TRIM55-202ENST00000315962 CRYGAP11844 174 aa5.07□□□□□ -1.6
TRIM55-202ENST00000315962 PRR34Q9NV39 138 aa5.07□□□□□ -1.6
TRIM55-202ENST00000315962 DNAH7Q8WXX0 4024 aa5.07□□□□□ -1.6
TRIM55-202ENST00000315962 Q8IZM0 81 aa5.07□□□□□ -1.6
TRIM55-202ENST00000315962 DPH3Q96FX2 82 aa5.07□□□□□ -1.6
TRIM55-202ENST00000315962 OBSCN-AS1Q96MR7 158 aa5.07□□□□□ -1.6
TRIM55-202ENST00000315962 UPK3BQ9BT76 320 aa5.06□□□□□ -1.6
TRIM55-202ENST00000315962 C1orf43Q9BWL3 253 aa5.06□□□□□ -1.6
TRIM55-202ENST00000315962 SNURFQ9Y675 71 aa5.06□□□□□ -1.6
TRIM55-202ENST00000315962 PRKDCP78527 4128 aaKnown RBP5.06□□□□□ -1.6
TRIM55-202ENST00000315962 FBN3Q75N90 2809 aa5.05□□□□□ -1.6
TRIM55-202ENST00000315962 ZNF561-AS1K7EIQ3 104 aa5.05□□□□□ -1.6
TRIM55-202ENST00000315962 TRAV10A0A0B4J240 114 aa5.05□□□□□ -1.6
TRIM55-202ENST00000315962 Q6ZQY7 126 aa5.05□□□□□ -1.6
TRIM55-202ENST00000315962 CAMK2N2Q96S95 79 aa5.04□□□□□ -1.6
TRIM55-202ENST00000315962 TMEM258P61165 79 aa5.03□□□□□ -1.6
TRIM55-202ENST00000315962 Q8N9L7 120 aa5.03□□□□□ -1.6
TRIM55-202ENST00000315962 C6orf48Q9UBA6 75 aa5.03□□□□□ -1.6
TRIM55-202ENST00000315962 Q6ZRU5 148 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 1541.5 ms