RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 WDFY4Q6ZS81 3184 aa11.85□□□□□ -0.51
GABRB3-202ENST00000311550 DEFB116Q30KQ4 102 aa11.85□□□□□ -0.51
GABRB3-202ENST00000311550 MGAQ8IWI9 3026 aa11.84□□□□□ -0.51
GABRB3-202ENST00000311550 ESRGQ1W209 222 aa11.83□□□□□ -0.52
GABRB3-202ENST00000311550 A0A087WSZ3 146 aa11.81□□□□□ -0.52
GABRB3-202ENST00000311550 SPATA3Q8NHX4 192 aa11.81□□□□□ -0.52
GABRB3-202ENST00000311550 LINC00208Q96KT6 92 aa11.81□□□□□ -0.52
GABRB3-202ENST00000311550 PRLHP81277 87 aa11.8□□□□□ -0.52
GABRB3-202ENST00000311550 SMIM26A0A096LP01 95 aa11.8□□□□□ -0.52
GABRB3-202ENST00000311550 SERP1Q9Y6X1 66 aa11.8□□□□□ -0.52
GABRB3-202ENST00000311550 PRYO14603 147 aa11.8□□□□□ -0.52
GABRB3-202ENST00000311550 LINC00474Q9P2X8 69 aa11.79□□□□□ -0.52
GABRB3-202ENST00000311550 ZNF706Q9Y5V0 76 aaPredicted RBP11.79□□□□□ -0.52
GABRB3-202ENST00000311550 Q9BRP9 147 aa11.79□□□□□ -0.52
GABRB3-202ENST00000311550 LY6G6CO95867 125 aa11.79□□□□□ -0.52
GABRB3-202ENST00000311550 C7orf33Q8WU49 177 aa11.79□□□□□ -0.52
GABRB3-202ENST00000311550 C22orf24Q9Y442 160 aa11.78□□□□□ -0.52
GABRB3-202ENST00000311550 KIAA0087Q14695 138 aa11.77□□□□□ -0.52
GABRB3-202ENST00000311550 F8WDY8 70 aa11.77□□□□□ -0.53
GABRB3-202ENST00000311550 TMEM254Q8TBM7 123 aa11.77□□□□□ -0.53
GABRB3-202ENST00000311550 CASC2Q6XLA1 102 aa11.75□□□□□ -0.53
GABRB3-202ENST00000311550 LINC01556Q5JQF7 62 aa11.75□□□□□ -0.53
GABRB3-202ENST00000311550 VPS13AQ96RL7 3174 aa11.75□□□□□ -0.53
GABRB3-202ENST00000311550 CENPEQ02224 2701 aa11.75□□□□□ -0.53
GABRB3-202ENST00000311550 ZNF575Q86XF7 245 aa11.74□□□□□ -0.53
GABRB3-202ENST00000311550 CXCL6P80162 114 aa11.74□□□□□ -0.53
GABRB3-202ENST00000311550 Q8NAQ8 132 aa11.74□□□□□ -0.53
GABRB3-202ENST00000311550 A0A096LNT2 108 aa11.73□□□□□ -0.53
GABRB3-202ENST00000311550 SMCR5Q8TEV8 140 aa11.73□□□□□ -0.53
GABRB3-202ENST00000311550 HECTD1Q9ULT8 2610 aa11.73□□□□□ -0.53
GABRB3-202ENST00000311550 SVIPQ8NHG7 77 aa11.72□□□□□ -0.53
GABRB3-202ENST00000311550 CSNK1G2-AS1Q8NCQ2 148 aa11.71□□□□□ -0.53
GABRB3-202ENST00000311550 LINC00167Q96N53 147 aa11.71□□□□□ -0.53
GABRB3-202ENST00000311550 Q6ZQT0 140 aa11.71□□□□□ -0.54
GABRB3-202ENST00000311550 V9GYY9 64 aa11.7□□□□□ -0.54
GABRB3-202ENST00000311550 ELOF1P60002 83 aaKnown RBP11.7□□□□□ -0.54
GABRB3-202ENST00000311550 CRYGAP11844 174 aa11.69□□□□□ -0.54
GABRB3-202ENST00000311550 NUPR2A6NF83 97 aa11.69□□□□□ -0.54
GABRB3-202ENST00000311550 IGHV6-1A0A0B4J1U7 121 aa11.69□□□□□ -0.54
GABRB3-202ENST00000311550 SEC61GP60059 68 aa11.68□□□□□ -0.54
GABRB3-202ENST00000311550 DNAH14Q0VDD8 3507 aa11.68□□□□□ -0.54
GABRB3-202ENST00000311550 A6NED7 52 aa11.68□□□□□ -0.54
GABRB3-202ENST00000311550 GIG44P09565 113 aaPredicted RBP11.67□□□□□ -0.54
GABRB3-202ENST00000311550 F8P00451 2351 aa11.67□□□□□ -0.54
GABRB3-202ENST00000311550 CIRBP-AS1Q8TBR5 109 aa11.67□□□□□ -0.54
GABRB3-202ENST00000311550 FLNBO75369 2602 aaKnown RBP11.67□□□□□ -0.54
GABRB3-202ENST00000311550 SMIM29Q86T20 159 aa11.67□□□□□ -0.54
GABRB3-202ENST00000311550 HCG22E2RYF7 251 aa11.66□□□□□ -0.54
GABRB3-202ENST00000311550 SZT2Q5T011 3432 aa11.65□□□□□ -0.54
GABRB3-202ENST00000311550 PCOTHQ58A44 107 aa11.65□□□□□ -0.54
GABRB3-202ENST00000311550 CELSR3Q9NYQ7 3312 aa11.64□□□□□ -0.55
GABRB3-202ENST00000311550 H3BNG1 76 aa11.62□□□□□ -0.55
GABRB3-202ENST00000311550 USP24Q9UPU5 2620 aa11.62□□□□□ -0.55
GABRB3-202ENST00000311550 TRBV7-6A0A0J9YX20 115 aa11.62□□□□□ -0.55
GABRB3-202ENST00000311550 H0Y9P7 68 aa11.62□□□□□ -0.55
GABRB3-202ENST00000311550 VCANP13611 3396 aa11.62□□□□□ -0.55
GABRB3-202ENST00000311550 LOC110117498A0A087WWA1 95 aa11.62□□□□□ -0.55
GABRB3-202ENST00000311550 IGLV5-52A0A0A0MRZ9 124 aa11.62□□□□□ -0.55
GABRB3-202ENST00000311550 FLNAP21333 2647 aaKnown RBP11.61□□□□□ -0.55
GABRB3-202ENST00000311550 LAMA1P25391 3075 aa11.61□□□□□ -0.55
GABRB3-202ENST00000311550 C19orf73Q9NVV2 129 aa11.61□□□□□ -0.55
GABRB3-202ENST00000311550 PSPHP1O15172 72 aa11.6□□□□□ -0.55
GABRB3-202ENST00000311550 KRTAP24-1Q3LI83 254 aa11.6□□□□□ -0.55
GABRB3-202ENST00000311550 Q6ZRP5 223 aa11.6□□□□□ -0.55
GABRB3-202ENST00000311550 ST20-AS1Q8NBB2 130 aa11.6□□□□□ -0.55
GABRB3-202ENST00000311550 IGLV6-57P01721 117 aa11.58□□□□□ -0.55
GABRB3-202ENST00000311550 Q6ZRX8 168 aa11.58□□□□□ -0.56
GABRB3-202ENST00000311550 PRR15LQ9BU68 103 aa11.58□□□□□ -0.56
GABRB3-202ENST00000311550 VPREB1P12018 145 aa11.58□□□□□ -0.56
GABRB3-202ENST00000311550 RETNLBQ9BQ08 111 aa11.57□□□□□ -0.56
GABRB3-202ENST00000311550 ZNF292O60281 2723 aa11.57□□□□□ -0.56
GABRB3-202ENST00000311550 TM2D3Q9BRN9 247 aa11.56□□□□□ -0.56
GABRB3-202ENST00000311550 LINC00588Q9Y4M8 146 aa11.56□□□□□ -0.56
GABRB3-202ENST00000311550 GVQW2A0A096LPI5 108 aaPredicted RBP11.56□□□□□ -0.56
GABRB3-202ENST00000311550 NHLRC4P0CG21 123 aaPredicted RBP11.55□□□□□ -0.56
GABRB3-202ENST00000311550 C1orf195Q5TG92 126 aa11.55□□□□□ -0.56
GABRB3-202ENST00000311550 KRTAP10-3P60369 221 aa11.54□□□□□ -0.56
GABRB3-202ENST00000311550 FAM168BA1KXE4 195 aa11.54□□□□□ -0.56
GABRB3-202ENST00000311550 ITPR3Q14573 2671 aa11.53□□□□□ -0.56
GABRB3-202ENST00000311550 Q8NBF4 154 aa11.53□□□□□ -0.56
GABRB3-202ENST00000311550 LINC00476Q8WZB0 136 aa11.53□□□□□ -0.56
GABRB3-202ENST00000311550 PHF5AQ7RTV0 110 aaKnown RBP11.53□□□□□ -0.56
GABRB3-202ENST00000311550 MDFIQ99750 246 aa11.52□□□□□ -0.57
GABRB3-202ENST00000311550 C9orf129Q5T035 196 aaKnown RBP11.51□□□□□ -0.57
GABRB3-202ENST00000311550 SERTAD4-AS1Q5TG53 156 aa11.51□□□□□ -0.57
GABRB3-202ENST00000311550 DSPP15924 2871 aaKnown RBP11.5□□□□□ -0.57
GABRB3-202ENST00000311550 C4orf26Q17RF5 130 aa11.5□□□□□ -0.57
GABRB3-202ENST00000311550 BCE1O60756 84 aa11.5□□□□□ -0.57
GABRB3-202ENST00000311550 C1orf64Q8NEQ6 169 aa11.5□□□□□ -0.57
GABRB3-202ENST00000311550 C1orf134Q5TEV5 83 aa11.49□□□□□ -0.57
GABRB3-202ENST00000311550 MAP1AP78559 2803 aaPredicted RBP11.49□□□□□ -0.57
GABRB3-202ENST00000311550 FRYQ5TBA9 3013 aa11.49□□□□□ -0.57
GABRB3-202ENST00000311550 AKAP13Q12802 2813 aa11.49□□□□□ -0.57
GABRB3-202ENST00000311550 MGAM2Q2M2H8 2515 aa11.48□□□□□ -0.57
GABRB3-202ENST00000311550 CHTF8P0CG12 524 aa11.47□□□□□ -0.57
GABRB3-202ENST00000311550 PRR34Q9NV39 138 aa11.47□□□□□ -0.57
GABRB3-202ENST00000311550 KRTAP1-3Q8IUG1 177 aa11.46□□□□□ -0.57
GABRB3-202ENST00000311550 LINC00612Q8N6U2 182 aa11.46□□□□□ -0.57
GABRB3-202ENST00000311550 hDV103S1A0JD37 113 aa11.46□□□□□ -0.58
GABRB3-202ENST00000311550 RPS28P62857 69 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms