RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 A0A0U1RQV1 116 aa12.53□□□□□ -0.4
SPSB4-201ENST00000310546 TRRAPQ9Y4A5 3859 aa12.53□□□□□ -0.4
SPSB4-201ENST00000310546 LAMTOR3Q9UHA4 124 aa12.52□□□□□ -0.4
SPSB4-201ENST00000310546 C1orf158Q8N1D5 194 aa12.52□□□□□ -0.41
SPSB4-201ENST00000310546 DYNLRB2Q8TF09 96 aa12.51□□□□□ -0.41
SPSB4-201ENST00000310546 CYSRT1A8MQ03 144 aa12.51□□□□□ -0.41
SPSB4-201ENST00000310546 TRBV7-6A0A0J9YX20 115 aa12.5□□□□□ -0.41
SPSB4-201ENST00000310546 C6orf99Q4VX62 202 aa12.5□□□□□ -0.41
SPSB4-201ENST00000310546 TRGV2A0A075B6R0 118 aa12.5□□□□□ -0.41
SPSB4-201ENST00000310546 Q6ZQT0 140 aa12.5□□□□□ -0.41
SPSB4-201ENST00000310546 LINC00482Q8N8I6 264 aa12.49□□□□□ -0.41
SPSB4-201ENST00000310546 Q6ZVQ6 151 aa12.48□□□□□ -0.41
SPSB4-201ENST00000310546 STHQ8IWL8 128 aa12.48□□□□□ -0.41
SPSB4-201ENST00000310546 Q8N3U1 123 aa12.48□□□□□ -0.41
SPSB4-201ENST00000310546 TM2D3Q9BRN9 247 aa12.48□□□□□ -0.41
SPSB4-201ENST00000310546 SCXQ7RTU7 201 aa12.47□□□□□ -0.41
SPSB4-201ENST00000310546 IL17DQ8TAD2 202 aa12.46□□□□□ -0.42
SPSB4-201ENST00000310546 CLPSL2Q6UWE3 100 aa12.45□□□□□ -0.42
SPSB4-201ENST00000310546 BCE1O60756 84 aa12.45□□□□□ -0.42
SPSB4-201ENST00000310546 MPLKIPQ8TAP9 179 aa12.45□□□□□ -0.42
SPSB4-201ENST00000310546 STAB1Q9NY15 2570 aa12.44□□□□□ -0.42
SPSB4-201ENST00000310546 TRBV6-8A0A0A6YYG3 113 aa12.44□□□□□ -0.42
SPSB4-201ENST00000310546 LINC00959A0A1B0GUT2 108 aa12.44□□□□□ -0.42
SPSB4-201ENST00000310546 INAFM1C9JVW0 142 aa12.44□□□□□ -0.42
SPSB4-201ENST00000310546 TRGV4A0A0C4DH28 118 aa12.44□□□□□ -0.42
SPSB4-201ENST00000310546 MAST4O15021 2626 aa12.43□□□□□ -0.42
SPSB4-201ENST00000310546 ODF3L2Q3SX64 289 aa12.42□□□□□ -0.42
SPSB4-201ENST00000310546 F8WDY8 70 aa12.42□□□□□ -0.42
SPSB4-201ENST00000310546 ZNF561-AS1K7EIQ3 104 aa12.41□□□□□ -0.42
SPSB4-201ENST00000310546 MIFP14174 115 aa12.41□□□□□ -0.42
SPSB4-201ENST00000310546 DEFB114Q30KQ6 69 aa12.41□□□□□ -0.42
SPSB4-201ENST00000310546 C9orf116Q5BN46 136 aaPredicted RBP12.41□□□□□ -0.42
SPSB4-201ENST00000310546 LINC00575Q6W349 94 aa12.41□□□□□ -0.42
SPSB4-201ENST00000310546 LOC110117498A0A087WWA1 95 aa12.39□□□□□ -0.43
SPSB4-201ENST00000310546 SPATA3Q8NHX4 192 aa12.39□□□□□ -0.43
SPSB4-201ENST00000310546 NDUFC1O43677 76 aa12.38□□□□□ -0.43
SPSB4-201ENST00000310546 C1orf195Q5TG92 126 aa12.38□□□□□ -0.43
SPSB4-201ENST00000310546 LINC01006Q8NI28 216 aa12.38□□□□□ -0.43
SPSB4-201ENST00000310546 FAM229BQ4G0N7 80 aa12.38□□□□□ -0.43
SPSB4-201ENST00000310546 TRBV7-4A0A0J9YYF1 115 aa12.38□□□□□ -0.43
SPSB4-201ENST00000310546 Q8IZM0 81 aa12.38□□□□□ -0.43
SPSB4-201ENST00000310546 Q8NDZ9 215 aa12.38□□□□□ -0.43
SPSB4-201ENST00000310546 CXCL6P80162 114 aa12.37□□□□□ -0.43
SPSB4-201ENST00000310546 Q6ZQY7 126 aa12.37□□□□□ -0.43
SPSB4-201ENST00000310546 COL6A5A8TX70 2615 aa12.36□□□□□ -0.43
SPSB4-201ENST00000310546 C6orf223Q8N319 242 aa12.36□□□□□ -0.43
SPSB4-201ENST00000310546 NREPQ16612 68 aa12.35□□□□□ -0.43
SPSB4-201ENST00000310546 TMEM254Q8TBM7 123 aa12.35□□□□□ -0.43
SPSB4-201ENST00000310546 C4orf3Q8WVX3 66 aa12.35□□□□□ -0.43
SPSB4-201ENST00000310546 V9GYY9 64 aa12.35□□□□□ -0.43
SPSB4-201ENST00000310546 LINC00269Q8N2A0 174 aa12.34□□□□□ -0.43
SPSB4-201ENST00000310546 PKD1L1Q8TDX9 2849 aa12.34□□□□□ -0.43
SPSB4-201ENST00000310546 BPY2O14599 106 aa12.32□□□□□ -0.44
SPSB4-201ENST00000310546 ATP5EP56381 51 aaPredicted RBP12.32□□□□□ -0.44
SPSB4-201ENST00000310546 SEC61GP60059 68 aa12.32□□□□□ -0.44
SPSB4-201ENST00000310546 MUC7Q8TAX7 377 aa12.32□□□□□ -0.44
SPSB4-201ENST00000310546 FBN1P35555 2871 aaKnown RBP12.32□□□□□ -0.44
SPSB4-201ENST00000310546 PLAC8L1A1L4L8 177 aa12.31□□□□□ -0.44
SPSB4-201ENST00000310546 Q8N9L7 120 aa12.31□□□□□ -0.44
SPSB4-201ENST00000310546 WFDC10AQ9H1F0 79 aa12.31□□□□□ -0.44
SPSB4-201ENST00000310546 IGLV10-54A0A075B6I4 117 aa12.31□□□□□ -0.44
SPSB4-201ENST00000310546 CCL24O00175 119 aa12.31□□□□□ -0.44
SPSB4-201ENST00000310546 A0A096LPF7 62 aa12.29□□□□□ -0.44
SPSB4-201ENST00000310546 C16orf74Q96GX8 76 aa12.28□□□□□ -0.44
SPSB4-201ENST00000310546 NOTCH1P46531 2555 aa12.28□□□□□ -0.44
SPSB4-201ENST00000310546 PDE6GP18545 87 aa12.27□□□□□ -0.44
SPSB4-201ENST00000310546 COX17Q14061 63 aa12.27□□□□□ -0.44
SPSB4-201ENST00000310546 DEFB130BP0DP73 79 aa12.27□□□□□ -0.45
SPSB4-201ENST00000310546 DEFB130AP0DP74 79 aa12.27□□□□□ -0.45
SPSB4-201ENST00000310546 KIAA0087Q14695 138 aa12.27□□□□□ -0.45
SPSB4-201ENST00000310546 C9orf66Q5T8R8 295 aa12.26□□□□□ -0.45
SPSB4-201ENST00000310546 GIG44P09565 113 aaPredicted RBP12.26□□□□□ -0.45
SPSB4-201ENST00000310546 KRTAP10-3P60369 221 aa12.25□□□□□ -0.45
SPSB4-201ENST00000310546 DAD1P61803 113 aa12.25□□□□□ -0.45
SPSB4-201ENST00000310546 GYPEP15421 78 aa12.23□□□□□ -0.45
SPSB4-201ENST00000310546 FUSP35637 526 aaKnown RBP eCLIP12.23□□□□□ -0.45
SPSB4-201ENST00000310546 ESRGQ1W209 222 aa12.23□□□□□ -0.45
SPSB4-201ENST00000310546 PRYO14603 147 aa12.23□□□□□ -0.45
SPSB4-201ENST00000310546 C10orf25Q5T742 122 aa12.21□□□□□ -0.46
SPSB4-201ENST00000310546 CHCHD10Q8WYQ3 142 aaPredicted RBP12.21□□□□□ -0.46
SPSB4-201ENST00000310546 LRCOL1A6NCL2 159 aa12.2□□□□□ -0.46
SPSB4-201ENST00000310546 UNQ6190/PRO20217Q6UXQ8 127 aa12.2□□□□□ -0.46
SPSB4-201ENST00000310546 HIGD2AQ9BW72 106 aa12.2□□□□□ -0.46
SPSB4-201ENST00000310546 A0A1B0GUV1 79 aa12.19□□□□□ -0.46
SPSB4-201ENST00000310546 CD164L2Q6UWJ8 174 aa12.19□□□□□ -0.46
SPSB4-201ENST00000310546 IGHV4-28A0A0C4DH34 117 aa12.18□□□□□ -0.46
SPSB4-201ENST00000310546 IGLV6-57P01721 117 aa12.17□□□□□ -0.46
SPSB4-201ENST00000310546 ANGP03950 147 aaKnown RBP12.17□□□□□ -0.46
SPSB4-201ENST00000310546 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.17□□□□□ -0.46
SPSB4-201ENST00000310546 ERC2-IT1O76042 136 aa12.16□□□□□ -0.46
SPSB4-201ENST00000310546 Q6ZTC4 211 aa12.16□□□□□ -0.46
SPSB4-201ENST00000310546 DIRC1Q969H9 104 aa12.15□□□□□ -0.46
SPSB4-201ENST00000310546 OCR1Q9BZK8 76 aa12.15□□□□□ -0.46
SPSB4-201ENST00000310546 NBEAL1Q6ZS30 2694 aa12.14□□□□□ -0.47
SPSB4-201ENST00000310546 IGKV4-1P06312 121 aa12.14□□□□□ -0.47
SPSB4-201ENST00000310546 XAGE1AQ9HD64 81 aa12.14□□□□□ -0.47
SPSB4-201ENST00000310546 REG3AQ06141 175 aa12.13□□□□□ -0.47
SPSB4-201ENST00000310546 H3BQ85 93 aa12.12□□□□□ -0.47
SPSB4-201ENST00000310546 COX7BP24311 80 aa12.11□□□□□ -0.47
SPSB4-201ENST00000310546 SPAG11BQ08648 103 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms