RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 TMEM258P61165 79 aa8.89□□□□□ -0.99
RETREG3-201ENST00000309428 IGLV5-39A0A0G2JS06 123 aa8.88□□□□□ -0.99
RETREG3-201ENST00000309428 OXLD1Q5BKU9 147 aa8.88□□□□□ -0.99
RETREG3-201ENST00000309428 CHCHD10Q8WYQ3 142 aaPredicted RBP8.88□□□□□ -0.99
RETREG3-201ENST00000309428 RETNQ9HD89 108 aa8.88□□□□□ -0.99
RETREG3-201ENST00000309428 LRCOL1A6NCL2 159 aa8.87□□□□□ -0.99
RETREG3-201ENST00000309428 Q6JHZ5 121 aa8.87□□□□□ -0.99
RETREG3-201ENST00000309428 IGKV2-28A0A075B6P5 120 aa8.86□□□□□ -0.99
RETREG3-201ENST00000309428 IGKV2D-28P01615 120 aa8.86□□□□□ -0.99
RETREG3-201ENST00000309428 PRR4Q16378 134 aa8.86□□□□□ -0.99
RETREG3-201ENST00000309428 FAM104AQ969W3 186 aa8.86□□□□□ -0.99
RETREG3-201ENST00000309428 C3orf84H3BNL1 204 aa8.86□□□□□ -0.99
RETREG3-201ENST00000309428 TRBV6-4A0A1B0GX49 114 aa8.85□□□□□ -0.99
RETREG3-201ENST00000309428 GIG44P09565 113 aaPredicted RBP8.85□□□□□ -0.99
RETREG3-201ENST00000309428 REG3AQ06141 175 aa8.85□□□□□ -0.99
RETREG3-201ENST00000309428 F8WEM9 126 aa8.84□□□□□ -0.99
RETREG3-201ENST00000309428 IGLV1-51P01701 117 aa8.84□□□□□ -0.99
RETREG3-201ENST00000309428 UNQ6190/PRO20217Q6UXQ8 127 aa8.84□□□□□ -0.99
RETREG3-201ENST00000309428 RMI2Q96E14 147 aa8.84□□□□□ -0.99
RETREG3-201ENST00000309428 CCKP06307 115 aa8.84□□□□□ -0.99
RETREG3-201ENST00000309428 C6orf223Q8N319 242 aa8.84□□□□□ -1
RETREG3-201ENST00000309428 Q8N9L7 120 aa8.84□□□□□ -1
RETREG3-201ENST00000309428 CAMK2N2Q96S95 79 aa8.84□□□□□ -1
RETREG3-201ENST00000309428 KRTAP10-3P60369 221 aa8.83□□□□□ -1
RETREG3-201ENST00000309428 NREPQ16612 68 aa8.83□□□□□ -1
RETREG3-201ENST00000309428 TENM3Q9P273 2699 aa8.83□□□□□ -1
RETREG3-201ENST00000309428 Q8N814 137 aa8.83□□□□□ -1
RETREG3-201ENST00000309428 DPH3Q96FX2 82 aa8.83□□□□□ -1
RETREG3-201ENST00000309428 FHL2Q14192 279 aa8.82□□□□□ -1
RETREG3-201ENST00000309428 PRO0255Q9UI72 69 aa8.82□□□□□ -1
RETREG3-201ENST00000309428 KMT2BQ9UMN6 2715 aaPredicted RBP8.82□□□□□ -1
RETREG3-201ENST00000309428 BEAN1Q3B7T3 259 aa8.81□□□□□ -1
RETREG3-201ENST00000309428 DIRC1Q969H9 104 aa8.81□□□□□ -1
RETREG3-201ENST00000309428 CMC4P56277 68 aaPredicted RBP8.81□□□□□ -1
RETREG3-201ENST00000309428 A0A087WZ39 114 aa8.8□□□□□ -1
RETREG3-201ENST00000309428 LINC01561Q8N1V8 128 aa8.8□□□□□ -1
RETREG3-201ENST00000309428 CYSTM1Q9H1C7 97 aa8.8□□□□□ -1
RETREG3-201ENST00000309428 CELA1Q9UNI1 258 aa8.8□□□□□ -1
RETREG3-201ENST00000309428 IGHV3OR16-9A0A0B4J2B5 98 aa8.8□□□□□ -1
RETREG3-201ENST00000309428 CRYGAP11844 174 aa8.8□□□□□ -1
RETREG3-201ENST00000309428 DEFB121Q5J5C9 76 aa8.8□□□□□ -1
RETREG3-201ENST00000309428 IGKV2D-24A0A075B6R9 120 aa8.79□□□□□ -1
RETREG3-201ENST00000309428 IGLV5-45A0A087WSX0 123 aa8.79□□□□□ -1
RETREG3-201ENST00000309428 KRTAP1-1Q07627 177 aa8.79□□□□□ -1
RETREG3-201ENST00000309428 NKAPP1Q8N9T2 125 aa8.79□□□□□ -1
RETREG3-201ENST00000309428 NDUFC2O95298 119 aa8.77□□□□□ -1.01
RETREG3-201ENST00000309428 COX7BP24311 80 aa8.76□□□□□ -1.01
RETREG3-201ENST00000309428 CYSRT1A8MQ03 144 aa8.76□□□□□ -1.01
RETREG3-201ENST00000309428 PLAC8L1A1L4L8 177 aa8.75□□□□□ -1.01
RETREG3-201ENST00000309428 TRBV10-3A0A0K0K1G6 114 aa8.75□□□□□ -1.01
RETREG3-201ENST00000309428 BPY2O14599 106 aa8.74□□□□□ -1.01
RETREG3-201ENST00000309428 TRAV10A0A0B4J240 114 aa8.73□□□□□ -1.01
RETREG3-201ENST00000309428 Q6ZVQ6 151 aa8.73□□□□□ -1.01
RETREG3-201ENST00000309428 C19orf73Q9NVV2 129 aa8.73□□□□□ -1.01
RETREG3-201ENST00000309428 STAB2Q8WWQ8 2551 aa8.73□□□□□ -1.01
RETREG3-201ENST00000309428 NANOS2P60321 138 aaKnown RBP8.73□□□□□ -1.01
RETREG3-201ENST00000309428 ATP5EP2Q5VTU8 51 aa8.73□□□□□ -1.01
RETREG3-201ENST00000309428 CD164L2Q6UWJ8 174 aa8.73□□□□□ -1.01
RETREG3-201ENST00000309428 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.73□□□□□ -1.01
RETREG3-201ENST00000309428 IGHV4-30-4P0DP06 118 aa8.72□□□□□ -1.01
RETREG3-201ENST00000309428 LINC01547P58512 204 aaPredicted RBP8.72□□□□□ -1.01
RETREG3-201ENST00000309428 C10orf25Q5T742 122 aa8.72□□□□□ -1.01
RETREG3-201ENST00000309428 Q8IZM0 81 aa8.72□□□□□ -1.01
RETREG3-201ENST00000309428 C9orf66Q5T8R8 295 aa8.72□□□□□ -1.01
RETREG3-201ENST00000309428 UBE2BP63146 152 aa8.71□□□□□ -1.02
RETREG3-201ENST00000309428 APOC4P55056 127 aa8.7□□□□□ -1.02
RETREG3-201ENST00000309428 CSNK1G2-AS1Q8NCQ2 148 aa8.7□□□□□ -1.02
RETREG3-201ENST00000309428 FAM30AQ9NZY2 134 aa8.7□□□□□ -1.02
RETREG3-201ENST00000309428 X6R8D5 127 aa8.7□□□□□ -1.02
RETREG3-201ENST00000309428 TRAV7A0A075B6U4 112 aa8.69□□□□□ -1.02
RETREG3-201ENST00000309428 SPART-AS1P0CW21 52 aa8.69□□□□□ -1.02
RETREG3-201ENST00000309428 MIFP14174 115 aa8.69□□□□□ -1.02
RETREG3-201ENST00000309428 FUSP35637 526 aaKnown RBP eCLIP8.69□□□□□ -1.02
RETREG3-201ENST00000309428 A0A096LNI7 61 aa8.69□□□□□ -1.02
RETREG3-201ENST00000309428 C2orf48Q96LS8 159 aa8.69□□□□□ -1.02
RETREG3-201ENST00000309428 TENM2Q9NT68 2774 aa8.68□□□□□ -1.02
RETREG3-201ENST00000309428 M0R2N4 97 aa8.68□□□□□ -1.02
RETREG3-201ENST00000309428 ZNF73O43830 326 aaPredicted RBP8.68□□□□□ -1.02
RETREG3-201ENST00000309428 RPL37AP8A6NKH3 93 aa8.68□□□□□ -1.02
RETREG3-201ENST00000309428 TM2D3Q9BRN9 247 aa8.67□□□□□ -1.02
RETREG3-201ENST00000309428 LINC00575Q6W349 94 aa8.67□□□□□ -1.02
RETREG3-201ENST00000309428 ETDCA0A1B0GVM5 59 aa8.67□□□□□ -1.02
RETREG3-201ENST00000309428 NDUFC2-KCTD14E9PQ53 114 aa8.67□□□□□ -1.02
RETREG3-201ENST00000309428 LINC00474Q9P2X8 69 aa8.66□□□□□ -1.02
RETREG3-201ENST00000309428 Q6ZTC4 211 aa8.66□□□□□ -1.02
RETREG3-201ENST00000309428 WFDC10BQ8IUB3 73 aa8.65□□□□□ -1.02
RETREG3-201ENST00000309428 MUC7Q8TAX7 377 aa8.65□□□□□ -1.02
RETREG3-201ENST00000309428 SMIM26A0A096LP01 95 aa8.65□□□□□ -1.03
RETREG3-201ENST00000309428 SERP1Q9Y6X1 66 aa8.65□□□□□ -1.03
RETREG3-201ENST00000309428 DEFB116Q30KQ4 102 aa8.64□□□□□ -1.03
RETREG3-201ENST00000309428 FAM19A3Q7Z5A8 133 aa8.64□□□□□ -1.03
RETREG3-201ENST00000309428 PDE6GP18545 87 aa8.63□□□□□ -1.03
RETREG3-201ENST00000309428 C16orf95Q9H693 158 aa8.63□□□□□ -1.03
RETREG3-201ENST00000309428 TRBV7-6A0A0J9YX20 115 aa8.63□□□□□ -1.03
RETREG3-201ENST00000309428 RPS28P62857 69 aaKnown RBP8.63□□□□□ -1.03
RETREG3-201ENST00000309428 WFDC13Q8IUB5 93 aa8.63□□□□□ -1.03
RETREG3-201ENST00000309428 A0A0J9YWU9 116 aa8.62□□□□□ -1.03
RETREG3-201ENST00000309428 TMEM254Q8TBM7 123 aa8.62□□□□□ -1.03
RETREG3-201ENST00000309428 LINC00336Q6ZUF6 198 aa8.62□□□□□ -1.03
RETREG3-201ENST00000309428 PSPHP1O15172 72 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms