RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 UBE2AP49459 152 aa9.2□□□□□ -0.94
DDX54-201ENST00000306014 ATRQ13535 2644 aa9.2□□□□□ -0.94
DDX54-201ENST00000306014 NDUFC1O43677 76 aa9.19□□□□□ -0.94
DDX54-201ENST00000306014 RETNQ9HD89 108 aa9.19□□□□□ -0.94
DDX54-201ENST00000306014 DMXL1Q9Y485 3027 aa9.19□□□□□ -0.94
DDX54-201ENST00000306014 FSHBP01225 129 aa9.19□□□□□ -0.94
DDX54-201ENST00000306014 LINC01547P58512 204 aaPredicted RBP9.19□□□□□ -0.94
DDX54-201ENST00000306014 NDUFC2-KCTD14E9PQ53 114 aa9.19□□□□□ -0.94
DDX54-201ENST00000306014 CRYGAP11844 174 aa9.19□□□□□ -0.94
DDX54-201ENST00000306014 LINC01561Q8N1V8 128 aa9.19□□□□□ -0.94
DDX54-201ENST00000306014 CELA1Q9UNI1 258 aa9.19□□□□□ -0.94
DDX54-201ENST00000306014 SVIPQ8NHG7 77 aa9.18□□□□□ -0.94
DDX54-201ENST00000306014 C10orf25Q5T742 122 aa9.17□□□□□ -0.94
DDX54-201ENST00000306014 LOC400499M0QZD8 3231 aa9.17□□□□□ -0.94
DDX54-201ENST00000306014 NANOS2P60321 138 aaKnown RBP9.17□□□□□ -0.94
DDX54-201ENST00000306014 WFDC10BQ8IUB3 73 aa9.17□□□□□ -0.94
DDX54-201ENST00000306014 NDUFB1O75438 58 aa9.16□□□□□ -0.94
DDX54-201ENST00000306014 H0Y9J4 135 aa9.16□□□□□ -0.94
DDX54-201ENST00000306014 CFAP47Q6ZTR5 3102 aa9.16□□□□□ -0.94
DDX54-201ENST00000306014 FLNCQ14315 2725 aa9.16□□□□□ -0.94
DDX54-201ENST00000306014 DHRS4-AS1Q9P1J3 65 aa9.16□□□□□ -0.94
DDX54-201ENST00000306014 TACC2O95359 2948 aa9.16□□□□□ -0.94
DDX54-201ENST00000306014 PRR4Q16378 134 aa9.15□□□□□ -0.94
DDX54-201ENST00000306014 Q6ZTC4 211 aa9.15□□□□□ -0.94
DDX54-201ENST00000306014 LYPD5Q6UWN5 251 aa9.15□□□□□ -0.95
DDX54-201ENST00000306014 FAM30AQ9NZY2 134 aa9.15□□□□□ -0.95
DDX54-201ENST00000306014 A0A0U1RQV1 116 aa9.14□□□□□ -0.95
DDX54-201ENST00000306014 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.14□□□□□ -0.95
DDX54-201ENST00000306014 PKIGQ9Y2B9 76 aa9.14□□□□□ -0.95
DDX54-201ENST00000306014 X6R8D5 127 aa9.14□□□□□ -0.95
DDX54-201ENST00000306014 A0A0J9YWU9 116 aa9.13□□□□□ -0.95
DDX54-201ENST00000306014 Q6ZRU5 148 aa9.13□□□□□ -0.95
DDX54-201ENST00000306014 WFDC13Q8IUB5 93 aa9.13□□□□□ -0.95
DDX54-201ENST00000306014 Q8N9L7 120 aa9.13□□□□□ -0.95
DDX54-201ENST00000306014 SERP1Q9Y6X1 66 aa9.13□□□□□ -0.95
DDX54-201ENST00000306014 SMIM26A0A096LP01 95 aa9.12□□□□□ -0.95
DDX54-201ENST00000306014 ATP5EP56381 51 aaPredicted RBP9.12□□□□□ -0.95
DDX54-201ENST00000306014 TEP1Q99973 2627 aaKnown RBP9.11□□□□□ -0.95
DDX54-201ENST00000306014 A0A096LNT2 108 aa9.11□□□□□ -0.95
DDX54-201ENST00000306014 SPATA3Q8NHX4 192 aa9.11□□□□□ -0.95
DDX54-201ENST00000306014 UNC79Q9P2D8 2635 aa9.11□□□□□ -0.95
DDX54-201ENST00000306014 ATMQ13315 3056 aa9.11□□□□□ -0.95
DDX54-201ENST00000306014 C1orf137Q5JT78 98 aa9.11□□□□□ -0.95
DDX54-201ENST00000306014 C6orf48Q9UBA6 75 aa9.1□□□□□ -0.95
DDX54-201ENST00000306014 FAM104AQ969W3 186 aa9.1□□□□□ -0.95
DDX54-201ENST00000306014 LRBAP50851 2863 aa9.09□□□□□ -0.95
DDX54-201ENST00000306014 GIG44P09565 113 aaPredicted RBP9.09□□□□□ -0.95
DDX54-201ENST00000306014 TRAV10A0A0B4J240 114 aa9.08□□□□□ -0.96
DDX54-201ENST00000306014 LRCOL1A6NCL2 159 aa9.08□□□□□ -0.96
DDX54-201ENST00000306014 C9orf129Q5T035 196 aaKnown RBP9.08□□□□□ -0.96
DDX54-201ENST00000306014 Q6ZQT0 140 aa9.08□□□□□ -0.96
DDX54-201ENST00000306014 TMEM254Q8TBM7 123 aa9.08□□□□□ -0.96
DDX54-201ENST00000306014 CSNK1G2-AS1Q8NCQ2 148 aa9.08□□□□□ -0.96
DDX54-201ENST00000306014 IL17DQ8TAD2 202 aa9.08□□□□□ -0.96
DDX54-201ENST00000306014 MAST4O15021 2626 aa9.07□□□□□ -0.96
DDX54-201ENST00000306014 ASPMQ8IZT6 3477 aa9.07□□□□□ -0.96
DDX54-201ENST00000306014 CXCL6P80162 114 aa9.07□□□□□ -0.96
DDX54-201ENST00000306014 B9D2Q9BPU9 175 aa9.07□□□□□ -0.96
DDX54-201ENST00000306014 MGAM2Q2M2H8 2515 aa9.07□□□□□ -0.96
DDX54-201ENST00000306014 PLAC8L1A1L4L8 177 aa9.06□□□□□ -0.96
DDX54-201ENST00000306014 PRYO14603 147 aa9.05□□□□□ -0.96
DDX54-201ENST00000306014 C2orf48Q96LS8 159 aa9.05□□□□□ -0.96
DDX54-201ENST00000306014 COL12A1Q99715 3063 aa9.04□□□□□ -0.96
DDX54-201ENST00000306014 RPS28P62857 69 aaKnown RBP9.03□□□□□ -0.96
DDX54-201ENST00000306014 C14orf177Q52M58 125 aa9.02□□□□□ -0.97
DDX54-201ENST00000306014 KRTAP1-3Q8IUG1 177 aa9.02□□□□□ -0.97
DDX54-201ENST00000306014 C4orf26Q17RF5 130 aa9.01□□□□□ -0.97
DDX54-201ENST00000306014 LOC110117498A0A087WWA1 95 aa9.01□□□□□ -0.97
DDX54-201ENST00000306014 C19orf73Q9NVV2 129 aa9.01□□□□□ -0.97
DDX54-201ENST00000306014 KIAA0087Q14695 138 aa9.01□□□□□ -0.97
DDX54-201ENST00000306014 DEFB116Q30KQ4 102 aa9.01□□□□□ -0.97
DDX54-201ENST00000306014 ELOF1P60002 83 aaKnown RBP9□□□□□ -0.97
DDX54-201ENST00000306014 KRTAP24-1Q3LI83 254 aa9□□□□□ -0.97
DDX54-201ENST00000306014 LINC01600Q96MT4 127 aa9□□□□□ -0.97
DDX54-201ENST00000306014 IGKV4-1P06312 121 aa9□□□□□ -0.97
DDX54-201ENST00000306014 C7orf33Q8WU49 177 aa9□□□□□ -0.97
DDX54-201ENST00000306014 BAHCC1Q9P281 2608 aa9□□□□□ -0.97
DDX54-201ENST00000306014 TRBV7-6A0A0J9YX20 115 aa8.99□□□□□ -0.97
DDX54-201ENST00000306014 ESRGQ1W209 222 aa8.99□□□□□ -0.97
DDX54-201ENST00000306014 REG3GQ6UW15 175 aa8.98□□□□□ -0.97
DDX54-201ENST00000306014 TM2D3Q9BRN9 247 aa8.98□□□□□ -0.97
DDX54-201ENST00000306014 Q8NAQ8 132 aa8.98□□□□□ -0.97
DDX54-201ENST00000306014 GCN1Q92616 2671 aaKnown RBP8.98□□□□□ -0.97
DDX54-201ENST00000306014 MRPL55Q7Z7F7 128 aaKnown RBP8.98□□□□□ -0.97
DDX54-201ENST00000306014 SPTSSBQ8NFR3 76 aa8.98□□□□□ -0.97
DDX54-201ENST00000306014 LINC00208Q96KT6 92 aa8.98□□□□□ -0.97
DDX54-201ENST00000306014 ZZEF1O43149 2961 aa8.97□□□□□ -0.97
DDX54-201ENST00000306014 IGLV6-57P01721 117 aa8.97□□□□□ -0.97
DDX54-201ENST00000306014 A0A087WSZ3 146 aa8.97□□□□□ -0.97
DDX54-201ENST00000306014 ZFHX4Q86UP3 3567 aa8.96□□□□□ -0.97
DDX54-201ENST00000306014 BCE1O60756 84 aa8.95□□□□□ -0.98
DDX54-201ENST00000306014 SMIM29Q86T20 159 aa8.95□□□□□ -0.98
DDX54-201ENST00000306014 C22orf24Q9Y442 160 aa8.94□□□□□ -0.98
DDX54-201ENST00000306014 PRLHP81277 87 aa8.94□□□□□ -0.98
DDX54-201ENST00000306014 LAMA5O15230 3695 aa8.94□□□□□ -0.98
DDX54-201ENST00000306014 CHKB-CPT1BH3BT56 60 aa8.94□□□□□ -0.98
DDX54-201ENST00000306014 F8WDY8 70 aa8.93□□□□□ -0.98
DDX54-201ENST00000306014 VPREB1P12018 145 aa8.93□□□□□ -0.98
DDX54-201ENST00000306014 LINC01556Q5JQF7 62 aa8.93□□□□□ -0.98
DDX54-201ENST00000306014 IGLV9-49A0A0B4J1Y8 123 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms